
PFRMAT AL
TARGET T0097
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.59 
REMARK CONFIDENCE: GUESS     (50% confidence [ ZSCORE>=3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1aep
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1aep
G 123     N     6
C 124     I     7
L 125     A     8
P 126     E     9
A 127     A    10
Y 128     V    11
D 129     Q    12
A 130     Q    13
L 131     L    14
A 132     N    15
G 133     H    16
Q 134     T    17
F 135     I    18
I 136     V    19
E 137     N    20
A 138     A    21
S 139     A    22
S 140     H    23
R 141     E    24
E 142     L    25
A 143     H    26
R 144     E    27
Q 145     T    28
A 146     L    29
I 147     G    30
L 148     L    31
K 149     P    32
Q 150     T    33
G 151     P    34
Q 152     D    35
D 153     E    36
G 154     A    37
L 155     L    38
S 156     N    39
G 157     L    40
V 158     L    41
K 159     T    42
E 160     E    43
T 161     Q    44
D 162     A    45
K 163     N    46
K 164     A    47
W 165     F    48
A 166     K    49
S 167     T    50
Q 168     K    51
Y 169     I    52
L 170     A    53
K 171     E    54
I 172     V    55
M 173     T    56
G 174     T    57
K 175     S    58
I 176     L    59
L 177     K    60
D 178     Q    61
Q 179     E    62
G 180     A    63
E 181     E    64
D 182     K    65
F 183     H    66
P 184     V    70
A 185     A    71
S 186     E    72
E 187     Q    73
L 188     L    74
A 189     N    75
R 190     A    76
I 191     F    77
S 192     A    78
K 193     R    79
L 194     N    80
I 195     L    81
E 196     N    82
N 197     N    83
K 198     S    84
M 199     I    85
S 200     H    86
E 201     D    87
G 202     A    88
K 203     S    91
K 204     L    92
E 205     N    93
E 206     L    94
L 207     Q    95
Q 208     D    96
R 209     Q    97
S 210     L    98
L 211     N    99
N 212     S   100
I 213     L   101
L 214     Q   102
T 215     S   103
A 216     A   104
F 217     L   105
R 218     T   106
K 219     N   107
K 220     V   108
G 221     G   109
A 222     H   110
E 223     Q   111
K 224     W   112
E 225     Q   113
E 226     D   114
L 227     I   115
TER
END

