
PFRMAT AL
TARGET T0095
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 3
PARENT 1qjb_A
G  411 M 1
N  412 D 2
E  413 K 3
K  414 N 4
E  415 E 5
V  416 L 6
K  417 V 7
E  418 Q 8
Y  419 K 9
A  420 A 10
V  422 K 11
F  423 L 12
R  424 A 13
E  425 E 14
H  426 Q 15
A  427 A 16
N  428 E 17
K  429 R 18
L  430 Y 19
I  431 D 20
E  432 D 21
V  433 M 22
A  434 A 23
A  437 A 24
C  438 C 25
S  439 M 26
I  440 K 27
S  441 S 28
N  442 V 29
N  443 T 30
E  444 E 31
E  445 Q 32
G  446 G 33
V  447 A 34
K  448 E 35
L  449 L 36
V  450 S 37
R  451 N 38
M  452 E 39
S  453 E 40
A  454 R 41
S  455 N 42
Q  456 L 43
L  457 L 44
E  458 S 45
A  459 V 46
L  460 A 47
C  461 Y 48
P  462 K 49
Q  463 N 50
V  464 V 51
I  465 V 52
N  466 G 53
A  467 A 54
A  468 R 55
L  469 R 56
A  470 S 57
L  471 S 58
A  472 W 59
A  473 R 60
K  474 V 61
P  475 V 62
Q  476 S 63
S  477 S 64
K  478 I 65
L  479 E 66
A  480 Q 67
Q  481 K 68
E  482 E 73
N  483 K 74
M  484 K 75
D  485 Q 76
L  486 Q 77
F  487 M 78
K  488 A 79
E  489 R 80
Q  490 E 81
W  491 Y 82
E  492 R 83
K  493 E 84
Q  494 K 85
V  495 I 86
R  496 E 87
V  497 E 89
L  498 L 90
T  499 R 91
D  500 D 92
A  501 I 93
V  502 C 94
D  503 N 95
D  504 D 96
I  505 V 97
T  506 L 98
S  507 S 99
I  508 L 100
D  509 E 102
D  510 K 103
F  511 F 104
L  512 L 105
A  513 A 112
V  514 E 113
S  515 S 114
E  516 K 115
N  517 V 116
H  518 K 120
I  519 M 121
L  520 K 122
E  521 G 123
D  522 D 124
V  523 Y 125
N  524 Y 126
K  525 R 127
C  526 Y 128
V  527 L 129
I  528 A 130
A  529 E 131
L  530 V 132
Q  531 A 133
E  532 A 134
K  533 G 135
D  534 D 136
V  535 K 138
D  536 K 139
G  537 G 140
L  538 I 141
D  539 V 142
R  540 D 143
T  541 Q 144
A  542 S 145
G  543 Q 146
A  544 Q 147
I  545 A 148
R  546 Y 149
G  547 Q 150
R  548 E 151
A  549 A 152
A  550 F 153
R  551 E 154
V  552 I 155
V  556 S 156
T  557 K 157
S  558 K 158
E  559 E 159
M  560 M 160
D  561 Q 161
N  562 P 162
Y  563 T 163
E  564 H 164
P  565 P 165
G  566 S 175
V  567 V 176
Y  568 F 177
T  569 Y 178
E  570 Y 179
K  571 E 180
V  572 I 181
L  573 L 182
E  574 N 183
A  575 S 184
T  576 P 185
K  577 E 186
L  578 K 187
L  579 A 188
S  580 C 189
N  581 S 190
T  582 L 191
V  583 A 192
M  584 K 193
P  585 T 194
R  586 A 195
F  587 F 196
T  588 D 197
E  589 E 198
Q  590 A 199
V  591 I 200
A  593 A 201
A  594 E 202
V  595 L 203
E  596 D 204
A  597 T 205
L  598 L 206
S  599 S 207
E  608 E 208
N  609 E 209
E  610 S 210
F  611 Y 211
I  612 K 212
D  613 D 213
A  614 S 214
S  615 M 218
R  616 Q 219
L  617 L 220
V  618 L 221
Y  619 R 222
D  620 D 223
G  621 N 224
I  622 L 225
R  623 T 226
D  624 D 231
I  625 T 232
TER
END

