
PFRMAT AL
TARGET T0095
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=4.59 
REMARK CONFIDENCE: GUESS     (50% confidence [ ZSCORE>=3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd2a0b
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 2a0b
E 425     S   657
H 426     K   658
A 427     S   659
N 428     E   660
K 429     A   661
L 430     L   662
I 431     L   663
E 432     D   664
I 465     I   665
N 466     P   666
A 467     M   667
A 468     L   668
L 469     E   669
A 470     Q   670
L 471     Y   671
A 472     L   672
A 473     E   673
K 474     L   674
P 475     V   675
Q 476     G   676
S 477     P   677
K 478     K   678
L 479     L   679
A 480     I   680
Q 481     T   681
E 482     D   682
N 483     G   683
M 484     L   684
D 485     A   685
L 486     V   686
F 487     F   687
K 488     E   688
E 489     K   689
Q 490     M   690
W 491     M   691
E 492     P   692
K 493     G   693
Q 494     Y   694
V 495     V   695
R 496     S   696
V 497     V   697
L 498     L   698
T 499     E   699
D 500     S   700
A 501     N   701
V 502     L   702
D 503     T   703
E 532     A   704
K 533     Q   705
D 534     D   706
V 535     K   707
D 536     K   708
G 537     G   709
L 538     I   710
D 539     V   711
R 540     E   712
T 541     E   713
A 542     G   714
G 543     H   715
A 544     K   716
I 545     I   717
R 546     K   718
G 547     G   719
R 548     A   720
A 549     A   721
A 550     G   722
R 551     R   727
V 552     H   728
I 553     L   729
H 554     Q   730
V 555     Q   731
V 556     L   732
T 557     G   733
S 558     Q   734
E 559     Q   735
M 560     I   736
D 561     Q   737
N 562     S   738
Y 563     P   739
E 564     D   740
P 565     L   741
G 566     P   742
V 567     A   743
Y 568     W   744
T 569     E   745
E 570     D   746
K 571     N   747
V 572     V   748
L 573     G   749
E 574     E   750
A 575     W   751
T 576     I   752
K 577     E   753
L 578     E   754
L 579     M   755
S 580     K   756
N 581     E   757
T 582     E   758
V 583     W   759
M 584     R   760
P 585     H   761
R 586     D   762
F 587     V   763
T 588     E   764
E 589     V   765
Q 590     L   766
V 591     K   767
E 592     A   768
A 593     W   769
A 594     V   770
V 595     A   771
E 596     K   772
A 597     A   773
L 598     T   774
TER
END

