
PFRMAT AL
TARGET T0094
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  2
PARENT 2jhb_A
L 14 V 7
P 15 P 8
D 16 D 9
E 17 Q 10
E 18 E 15
S 19 N 16
E 20 E 17
P 21 E 18
R 22 F 19
F 23 F 20
K 24 R 21
K 25 K 22
L 26 L 23
M 27 S 24
E 28 R 25
A 29 E 26
L 30 C 27
R 31 E 28
S 32 I 29
E 33 K 30
F 34 Y 31
T 35 T 32
G 36 G 33
P 37 F 34
R 38 R 35
F 39 D 36
V 40 R 37
P 41 P 38
H 42 H 39
D 54 E 40
E 55 E 41
A 56 R 42
K 57 Q 43
K 58 T 44
M 59 R 45
F 60 F 46
E 61 Q 47
S 62 N 48
A 63 A 49
C 64 C 50
D 65 D 52
G 66 G 53
L 67 R 54
A 72 S 55
T 73 E 56
V 74 I 57
D 75 A 58
R 76 F 59
V 77 V 60
S 78 A 61
T 79 T 62
G 80 G 63
T 81 T 64
F 82 N 65
L 89 L 66
L 90 S 67
L 91 L 68
Q 92 Q 69
T 93 F 70
T 94 F 71
P 95 P 72
E 96 A 73
V 97 S 74
M 98 W 75
E 99 Q 76
A 100 G 77
G 101 E 78
E 102 Q 79
M 117 R 80
P 118 Q 81
H 119 T 82
L 120 P 83
S 121 S 84
L 122 R 85
L 123 E 86
Y 124 Y 87
A 125 V 88
E 126 D 89
L 127 L 90
E 129 E 91
E 130 R 92
E 131 E 93
K 132 A 94
K 133 G 95
N 134 K 96
A 135 V 97
Q 136 Y 98
E 137 L 99
K 138 K 100
A 139 A 101
Y 140 P 102
T 141 M 103
L 142 I 104
L 146 L 105
D 147 N 106
G 148 G 107
L 149 V 108
S 150 C 109
F 151 V 110
R 152 I 111
L 153 W 112
N 154 K 113
L 156 I 116
A 157 D 117
L 158 L 118
C 159 H 119
K 160 R 120
T 161 L 121
D 162 D 122
T 163 G 123
E 164 M 124
D 165 G 125
L 168 L 127
E 169 E 128
T 170 F 129
W 171 D 130
E 172 E 131
T 173 E 132
V 174 R 133
A 175 A 134
TER
END

