
PFRMAT AL
TARGET T0094
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.75 
REMARK CONFIDENCE: GUESS     (50% confidence [ ZSCORE>=3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1tbd
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  3
PARENT 1tbd
E  17     G     1 
E  18     S     2 
S  19     K     3 
E  20     V     4 
P  21     E     5 
R  22     D     6 
F  23     P     7 
K  24     K     8 
K  25     D     9 
L  26     F    10 
M  27     P    11 
E  28     S    12 
A  29     E    13 
L  30     L    14 
R  31     L    15 
S  32     S    16 
E  33     F    17 
F  34     L    18 
T  35     S    19 
G  36     H    20 
P  37     A    21 
R  38     V    22 
F  39     F    23 
V  40     S    24 
P  41     N    25 
H  42     R    26 
V  43     T    27 
T  44     L    28 
V  45     A    29 
A  46     C    30 
V  47     F    31 
S  48     A    32 
A  49     I    33 
Y  50     Y    34 
L  51     T    35 
T  52     T    36 
A  53     K    37 
D  54     E    38 
E  55     K    39 
A  56     A    40 
K  57     A    41 
K  58     L    42 
M  59     L    43 
F  60     Y    44 
E  61     K    45 
S  62     K    46 
A  63     I    47 
C  64     M    48 
D  65     E    49 
G  66     K    50 
L  67     Y    51 
T  73     S    52 
V  74     V    53 
D  75     T    54 
R  76     F    55 
V  77     I    56 
S  78     S    57 
T  79     R    58 
G  80     H    59 
T  81     N    60 
F  82     S    61 
F  83     Y    62 
F  84     H    64 
Q  85     N    65 
C  86     I    66 
V  87     L    67 
F  88     F    68 
L  89     F    69 
L  90     L    70 
L  91     T    71 
Q  92     P    72 
T  93     H    73 
T  94     R    74 
P  95     H    75 
E  96     R    76 
V  97     V    77 
M  98     S    78 
E  99     A    79 
A 100     I    80 
G 101     N    81 
E 102     N    82 
H 103     Y    83 
C 104     A    84 
K 105     Q    85 
N 106     K    86 
H 107     L    87 
F 108     C    88 
N 109     T    89 
L 120     F    90 
S 121     S    91 
L 122     F    92 
L 123     L    93 
K 132     I    94 
K 133     C    95 
N 134     K    96 
A 135     G    97 
Q 136     V    98 
E 137     N    99 
K 138     K   100 
A 139     E   101 
Y 140     Y   102 
T 141     L   103 
L 142     M   104 
D 143     Y   105 
S 144     S   106 
S 145     A   107 
L 146     L   108 
D 147     T   109 
G 148     R   110 
L 149     D   111 
S 150     P   112 
F 151     F   113 
R 152     S   114 
L 153     V   115 
N 154     I   116 
R 155     E   117 
L 156     E   118 
A 157     S   119 
L 158     L   120 
C 159     P   121 
K 160     G   122 
T 161     L   124 
D 162     K   125 
T 163     E   126 
E 164     H   127 
D 165     D   128 
K 166     F   129 
T 167     N   130 
L 168     P   131 
E 169     E   132 
T 170     S   133 
W 171     S   134 
TER
END

