

PFRMAT AL
TARGET T0093
AUTHOR 9885-9936-6780
METHOD Smith-Waterman alignment of
METHOD secondary structure annotated
METHOD sequence.
MODEL 2
PARENT 1bxs_A
D    3   T  188
I    4   V  189
V    5   V  190
L    6   V  191
Y    7   K  192
E    8   P  193
P    9   A  194
E   10   E  195
I   11   Q  196
P   12   T  197
Q   13   P  198
N   14   L  199
T   15   T  200
G   16   A  201
N   17   H  203
I   18   M  204
I   19   G  205
R   20   S  206
L   21   L  207
C   22   I  208
A   23   K  209
N   24   E  210
T   25   A  211
G   26   G  212
F   27   F  213
R   28   V  217
L   29   V  218
H   30   N  219
I   32   I  220
E   33   V  221
P   34   P  222
G   36   G  223
F   37   Y  224
T   38   G  225
D   40   P  226
D   41   T  227
K   42   A  228
R   43   G  229
L   44   A  230
R   45   A  231
R   46   I  232
S   47   S  233
G   48   S  234
L   49   M  236
D   50   D  237
Y   51   V  238
H   52   D  239
E   53   K  240
F   54   V  241
A   55   A  242
I   57   F  243
R   59   T  244
H   60   G  245
K   61   S  246
T   62   T  247
F   63   E  248
E   64   V  249
A   65   G  250
F   66   K  251
L   67   L  252
E   68   E  255
S   69   G  258
E   70   K  259
K   71   S  260
P   72   N  261
K   73   L  262
R   74   K  263
L   75   R  264
F   76   V  265
A   77   S  266
L   78   L  267
T   79   E  268
T   80   L  269
K   81   G  270
G   82   G  271
TER
PARENT 1bxs_A
C   83   S  273
P   84   P  274
A   85   C  275
V   89   I  276
K   90   V  277
F   91   F  278
K   92   A  279
L   93   D  280
G   94   A  281
D   95   D  282
L   97   L  283
G  100   D  284
E  102   N  285
G  105   A  286
I  106   V  287
P  107   E  288
M  108   F  289
S  109   A  290
I  110   H  291
L  111   F  295
N  112   Y  296
M  116   H  297
E  117   Q  298
Q  118   G  299
M  124   Q  300
T  125   C  301
A  126   C  302
N  127   I  303
S  128   A  304
R  129   A  305
S  130   S  306
N  132   E  311
L  133   E  312
S  134   S  313
N  135   I  314
S  136   Y  315
V  137   D  316
A  138   E  317
V  139   F  318
T  140   V  319
V  141   R  320
Y  142   R  321
E  143   S  322
A  144   V  323
W  145   E  324
R  146   R  325
Q  147   A  326
L  148   K  327
G  149   K  328
Y  150   Y  329
K  151   V  330
G  152   G  332
A  153   N  333
V  154   P  334
N  155   L  335
L  156   T  336
P  157   P  337
E  158   G  338
V  159   V  339
K  160   S  340
TER
END
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Ajay K. Royyuru, PhD                   Phone: (914) 945-1335
Research Staff Member                    Fax: (914) 945-4104
Computational Biology Center          mailto:ajayr@us.ibm.com
IBM Research                                 --- IBM Internal ---
T. J. Watson Research Center           Phone: T/L 862-1335
P.O. Box 218, Route 134                  Fax: T/L 862-4104
Yorktown Heights, NY 10598            Office: 13-106D



