
PFRMAT AL
TARGET T0093
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.36 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1whi
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  1
PARENT 1whi
M   1     M     1
L   2     I     2
N  14     Q     3
T  15     Q     4
G  16     E     5
N  17     S     6
I  18     R     7
I  19     L     8
R  20     K     9
L  21     V    10
C  22     A    11
A  23     D    12
N  24     N    13
T  25     S    14
G  26     G    15
F  27     A    16
R  28     R    17
L  29     E    18
H  30     V    19
L  31     L    20
I  32     V    21
E  33     I    22
P  34     K    23
L  35     V    24
W  39     L    25
D  40     G    26
D  41     G    27
K  42     S    28
R  43     G    29
L  44     R    30
R  45     R    31
R  46     Y    32
S  47     A    33
G  48     N    34
L  49     I    35
D  50     G    36
Y  51     D    37
H  52     V    38
E  53     V    39
F  54     V    40
A  55     A    41
E  56     T    42
I  57     V    43
K  58     K    44
R  59     D    45
H  60     A    46
K  61     T    47
T  62     P    48
F  63     G    49
E  64     G    50
A  65     V    51
F  66     V    52
L  67     K    53
E  68     K    54
S  69     G    55
E  70     Q    56
K  71     V    57
P  72     V    58
K  73     K    59
R  74     A    60
L  75     V    61
F  76     V    62
A  77     V    63
L  78     R    64
T  79     T    65
T  80     K    66
K  81     R    67
G  82     G    68
C  83     V    69
P  84     P    72
A  85     D    73
H  86     G    74
S  87     S    75
Q  88     Y    76
V  89     I    77
K  90     R    78
F  91     F    79
K  92     D    80
L  93     E    81
G  94     N    82
D  95     A    83
Y  96     C    84
L  97     V    85
M  98     I    86
F  99     I    87
G 100     R    88
P 101     D    89
E 102     D    90
T 103     K    91
R 104     S    92
P 115     P    93
M 116     R    94
E 117     G    95
Q 118     T    96
K 119     R    97
I 120     I    98
R 121     F    99
I 122     G   100
P 123     P   101
M 124     V   102
T 125     A   103
A 126     R   104
N 127     E   105
S 128     L   106
R 129     R   107
S 130     D   108
M 131     K   109
N 132     D   110
L 133     F   111
S 134     M   112
N 135     K   113
S 136     I   114
V 137     I   115
A 138     S   116
V 139     L   117
T 140     A   118
P 157     P   119
E 158     E   120
V 159     V   121
K 160     I   122
TER
END

