
PFRMAT AL
TARGET T0090
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  1
PARENT 1tum
R 56 K 2
G 57 K 3
H 58 L 4
A 59 Q 5
A 60 I 6
V 61 A 7
L 62 V 8
L 63 G 9
P 64 I 10
F 65 I 11
D 66 R 12
P 67 N 13
V 68 E 14
R 69 N 15
D 70 N 16
E 71 E 17
V 72 I 18
V 73 F 19
L 74 I 20
I 75 T 21
E 76 R 22
Q 77 R 23
I 78 A 24
R 79 A 25
T 85 D 26
S 86 A 27
E 87 H 28
T 88 M 29
P 89 A 30
W 90 N 31
L 91 K 32
L 92 L 33
E 93 E 34
M 94 F 35
V 95 P 36
A 96 G 37
G 97 G 38
M 98 K 39
I 99 I 40
E 100 E 41
E 101 M 42
G 102 G 43
E 103 E 44
S 104 T 45
V 105 P 46
E 106 E 47
D 107 Q 48
V 108 A 49
A 109 V 50
R 110 V 51
R 111 R 52
E 112 E 53
A 113 L 54
I 114 Q 55
E 115 E 56
E 116 E 57
A 117 V 58
G 118 G 59
L 119 I 60
I 120 T 61
V 121 P 62
K 122 Q 63
R 123 H 64
T 124 F 65
K 125 S 66
P 126 L 67
V 127 F 68
L 128 E 69
S 129 K 70
F 130 L 71
L 131 E 72
A 132 Y 73
S 133 E 74
P 134 F 75
G 135 P 76
G 136 D 77
T 137 R 78
S 138 H 79
E 139 I 80
R 140 T 81
S 141 L 82
S 142 W 83
I 143 F 84
M 144 W 85
V 145 L 86
G 146 V 87
E 147 E 88
V 148 R 89
D 149 W 90
A 150 E 91
T 151 G 92
T 152 E 93
A 160 P 94
D 161 W 95
E 162 G 96
N 163 K 97
E 164 E 98
D 165 G 99
I 166 Q 100
R 167 P 101
V 168 G 102
H 169 E 103
V 170 W 104
V 171 M 105
S 172 S 106
R 173 L 107
E 174 V 108
Q 175 G 109
A 176 L 110
Y 177 N 111
Q 178 A 112
W 179 D 113
V 180 D 114
E 181 F 115
E 182 P 116
G 183 P 117
K 184 A 118
I 185 N 119
D 186 E 120
N 187 P 121
A 188 V 122
A 189 I 123
S 190 A 124
V 191 K 125
I 192 L 126
TER
END

