
PFRMAT AL
TARGET T0090
AUTHOR 2650-8406-4261
REMARK Target Was Recognized by All Methods
REMARK SDP Score was good
REMARK DDP Score was good 
REMARK DDP Alignments tend to be better, so we will go with that
REMARK The DDP was used as a prior with strong sequence information included
REMARK As before, low gap penalities were chosen (.6,.1) before (.8,.1)
METHOD This pairwise alignment was produced using the DDP Profile Method
METHOD Fold Choice was validated by SDP, DDP and H3P2
MODEL 1
PARENT 1mut
M 1 M 1
K 3 K 2
N 6 K 3
L 7 L 4
P 8 Q 5
V 9 I 6
T 10 A 7
F 11 V 8
G 12 G 9
I 18 I 10
I 19 I 11
R 21 R 12
E 22 E 14
T 23 N 15
L 24 I 18
F 28 F 19
F 29 I 20
S 30 T 21
R 35 R 22
R 37 R 23
H 38 H 28
R 39 K 32
L 40 L 33
F 41 F 35
N 42 G 37
G 43 G 38
Q 44 E 41
M 45 M 42
S 46 G 43
H 47 E 44
E 48 E 47
V 49 V 51
R 51 R 52
E 52 E 53
I 53 L 54
E 55 Q 55
R 56 E 56
G 57 G 59
L 63 I 60
P 64 P 62
F 65 F 65
D 70 S 66
L 74 L 67
I 75 F 68
E 76 E 69
R 79 K 70
I 80 L 71
A 82 E 72
Y 83 Y 73
E 87 E 74
T 88 F 75
P 89 P 76
W 90 W 83
L 91 F 84
L 92 L 86
V 105 V 87
E 106 E 88
R 111 R 89
E 112 E 91
G 118 G 92
K 122 E 93
P 126 P 94
F 130 W 95
G 136 G 96
S 138 K 97
E 139 E 98
G 146 G 99
E 147 Q 100
S 154 P 101
G 155 G 102
E 174 E 103
W 179 W 104
V 180 V 108
G 183 G 109
I 185 L 110
D 186 D 113
N 187 D 114
A 188 P 117
A 189 A 118
S 190 N 119
V 191 V 122
I 192 I 123
A 193 A 124
Q 195 K 125
L 197 L 126
Q 198 K 127
Q 202 R 128
L 204 L 129
TER
END


