
PFRMAT AL
TARGET T0090
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=2.66 
REMARK CONFIDENCE: UNCERTAIN (less than 50% confidence [ ZSCORE<3.5 ])
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1ifp0
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  5
PARENT 1ifp
L 159     M     1
A 160     Q     2
D 161     S     3
E 162     V     4
N 163     I     5
E 164     T     6
D 165     D     7
I 166     V     8
R 167     T     9
V 168     G    10
H 169     Q    11
V 170     L    12
V 171     T    13
S 172     A    14
R 173     V    15
E 174     Q    16
Q 175     A    17
A 176     D    18
Y 177     I    19
Q 178     T    20
W 179     T    21
V 180     I    22
E 181     G    23
E 182     G    24
G 183     A    25
K 184     I    26
I 185     I    27
D 186     V    28
N 187     L    29
A 188     A    30
A 189     A    31
S 190     V    32
V 191     V    33
I 192     L    34
A 193     G    35
L 194     I    36
Q 195     R    37
W 196     W    38
L 197     I    39
Q 198     K    40
L 199     A    41
H 200     Q    42
H 201     F    43
Q 202     F    44
TER
END




