
PFRMAT AL
TARGET T0089
AUTHOR 5619-7722-4694
REMARK Predictor remarks
METHOD Automated CAFASP2 submission
METHOD see http://cafasp.bioinfo.pl/server/3dpssm.html
METHOD and Kelley LA, MacCallum RM & Sternberg MJE (2000).
METHOD     Enhanced Genome Annotation using Structural Profiles
METHOD     in the Program 3D-PSSM. J. Mol. Biol. 299(2), 501-522.
METHOD
METHOD Major differences from the publication:
METHOD
METHOD Fold library based on SCOP 1.50 - no more than 70% pairwise
METHOD identity (astral-scopdom-seqres-sel-gs-bib-70-1.50).
METHOD
METHOD Fold library continuously updated from PDB, using 70%
METHOD identity cut-off and overlap criteria.
METHOD
METHOD The 3D-PSSM E-value is multiplied by the SAWTED E-value
METHOD if the latter is less than 0.2 and folds with SAWTED E-values
METHOD less than 0.2 do not belong to different superfamilies.
METHOD
MODEL 5
PARENT 1c0f_A
D    3 D 1
L    4 G 2
S    5 E 3
K    6 D 4
T    7 V 5
V    8 Q 6
F    9 A 7
Y   10 L 8
T   11 V 9
I   13 I 10
D   14 D 11
I   15 N 12
G   16 G 13
S   17 S 14
R   18 G 15
I   20 M 16
K   21 C 17
G   22 K 18
L   23 A 19
L   25 G 20
G   26 F 21
K   27 A 22
R   28 G 23
D   29 D 24
Q   30 D 25
E   31 A 26
W   32 P 27
E   33 R 28
A   34 A 29
L   35 V 30
A   36 F 31
F   37 P 32
S   38 S 33
S   39 I 34
V   40 V 35
K   41 P 38
S   42 R 39
R   43 H 40
G   44 T 41
L   45 G 42
D   46 K 50
E   47 D 51
G   48 S 52
E   49 Y 53
I   50 V 54
L   64 G 55
K   65 D 56
E   66 E 57
L   67 A 58
E   68 Q 59
E   69 S 60
Q   70 K 61
L   71 R 62
Q   72 G 63
V   94 I 64
I   95 L 65
E   96 T 66
R   97 L 67
D   98 K 68
F   99 Y 69
G  100 P 70
E  101 I 71
E  102 E 72
K  103 G 74
R  104 I 75
S  105 V 76
I  106 T 77
T  107 N 78
L  108 W 79
D  109 D 80
I  110 D 81
L  111 M 82
S  112 E 83
E  113 K 84
M  114 I 85
Q  115 W 86
E  142 H 87
R  143 H 88
I  144 T 89
V  145 F 90
F  146 Y 91
N  147 N 92
P  148 E 93
L  149 L 94
D  150 R 95
M  151 V 96
K  152 A 97
A  153 P 98
S  154 E 99
K  155 E 100
I  156 H 101
A  157 P 102
I  158 V 103
T  161 L 104
S  162 L 105
I  163 T 106
V  164 E 107
V  165 A 108
P  166 P 109
L  167 L 110
K  168 N 111
V  169 P 112
Y  170 K 113
E  171 A 114
M  172 N 115
F  173 R 116
Y  174 E 117
N  175 K 118
F  176 M 123
L  177 F 124
Q  178 E 125
D  179 T 126
T  180 F 127
V  181 N 128
K  182 T 129
S  183 P 130
P  184 A 131
F  185 M 132
Q  186 Y 133
L  187 V 134
K  188 A 135
S  189 I 136
S  190 Q 137
L  191 A 138
V  192 V 139
S  193 L 140
T  194 S 141
A  195 L 142
E  196 Y 143
G  197 A 144
V  198 S 145
L  199 G 146
T  200 R 147
T  201 T 148
P  202 T 149
V  208 G 150
V  209 I 151
V  210 V 152
V  211 M 153
N  212 D 154
L  213 S 155
G  214 G 156
Y  215 D 157
N  216 G 158
F  217 V 159
T  218 S 160
G  219 H 161
L  220 T 162
I  221 V 163
A  222 P 164
Y  223 I 165
K  224 Y 166
N  225 E 167
G  226 G 168
V  227 Y 169
P  228 A 170
I  229 L 171
K  230 I 175
I  231 L 176
S  232 R 177
V  234 L 178
P  235 D 179
V  236 L 180
G  237 A 181
M  238 G 182
K  239 R 183
H  240 D 184
V  241 L 185
I  242 T 186
K  243 D 187
D  244 Y 188
V  245 M 189
S  246 M 190
A  247 K 191
V  248 I 192
L  249 L 193
D  250 G 197
T  251 Y 198
S  252 S 199
F  253 F 200
E  254 T 201
E  255 T 203
S  256 A 204
E  257 E 205
R  258 R 206
L  259 I 212
I  260 K 213
I  261 E 214
T  262 K 215
H  263 L 216
G  264 A 217
N  265 Y 218
A  266 V 219
V  267 A 220
Y  268 L 221
N  269 D 222
D  270 S 232
L  271 S 233
K  272 S 234
E  273 A 235
E  274 L 236
E  275 E 237
I  276 K 238
Q  277 S 239
Y  278 Y 240
R  279 E 241
G  280 L 242
L  281 P 243
D  282 D 244
G  283 G 245
N  284 Q 246
T  285 V 247
I  286 I 248
K  287 T 249
T  288 I 250
T  289 G 251
T  290 N 252
A  291 E 253
K  292 R 254
K  293 R 256
L  294 C 257
S  295 P 258
V  296 E 259
I  297 L 261
I  298 F 262
H  299 Q 263
A  300 P 264
R  301 S 265
L  302 F 266
R  303 A 272
E  304 G 273
I  305 I 274
M  306 H 275
S  307 E 276
K  308 T 277
S  309 T 278
K  310 Y 279
K  311 N 280
F  312 S 281
F  313 I 282
R  314 M 283
E  315 K 284
V  316 C 285
E  317 D 286
A  318 V 287
K  319 D 288
I  320 I 289
V  321 R 290
E  322 K 291
E  323 D 292
G  324 L 293
P  329 Y 294
G  330 G 295
G  331 N 296
V  332 V 297
V  333 V 298
L  334 L 299
T  335 S 300
G  336 G 301
G  337 G 302
G  338 T 303
A  339 T 304
K  340 M 305
I  341 F 306
P  342 P 307
R  343 G 308
I  344 I 309
N  345 A 310
E  346 D 311
L  347 R 312
A  348 M 313
T  349 N 314
E  350 K 315
V  351 E 316
F  352 L 317
T  358 T 318
G  359 A 319
C  360 L 320
Y  361 A 321
A  362 P 322
N  363 S 323
S  364 T 324
D  365 M 325
R  366 K 326
P  367 I 327
S  368 K 328
I  369 I 329
I  370 I 330
N  371 A 331
A  372 P 332
D  373 P 333
E  374 E 334
P  379 R 335
S  380 K 336
F  381 Y 337
A  382 S 338
A  383 V 339
A  384 W 340
F  385 I 341
G  386 G 342
N  387 G 343
V  388 S 344
F  389 I 345
A  390 L 346
V  391 A 347
S  392 S 348
E  393 L 349
N  394 S 350
P  395 T 351
Y  396 F 352
E  397 Q 353
E  398 Q 354
T  399 M 355
P  400 W 356
V  401 I 357
K  402 S 358
S  403 K 359
E  404 E 360
N  405 E 361
P  406 Y 362
L  407 D 363
K  408 E 364
K  409 S 365
I  410 G 366
F  411 P 367
R  412 S 368
L  413 I 369
F  414 V 370
K  415 H 371
E  416 R 372
L  417 K 373
M  418 C 374
E  419 F 375
TER
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