
PFRMAT SS
TARGET T0087
AUTHOR 3878-6624-7634
REMARK -
METHOD Neural networks trained on latest version of pdb
METHOD See:
METHOD Prediction of protein secondary structure at 80 accuracy
METHOD Thomas Nordahl Petersen, Claus Lundegaard, Morten Nielsen,
METHOD Henrik Bohr, Jakob Bohr, Soren Brunak, Garry P. Gippert,
METHOD Ole Lund, Proteins, in press
MODEL 1
M C  1.00
S C  0.86
K E  0.73
I E  0.90
L E  0.97
V E  0.98
F E  0.95
G E  0.76
H C  0.50
Q C  0.70
N C  0.92
P C  0.94
D C  0.95
S H  0.54
D H  0.71
A H  0.90
I H  0.94
G H  0.96
S H  0.98
S H  0.99
M H  0.99
A H  0.99
Y H  0.99
A H  0.99
Y H  0.99
L H  0.98
K H  0.98
R H  0.96
Q H  0.87
L C  0.60
G C  0.98
V C  0.98
D C  0.94
A C  0.72
Q E  0.86
A E  0.98
V E  0.98
A E  0.94
L E  0.54
G C  0.81
N C  0.90
P C  0.89
N C  0.88
E H  0.65
E H  0.78
T H  0.88
A H  0.92
F H  0.94
V H  0.98
L H  0.98
D H  0.95
Y H  0.89
F H  0.62
G C  0.83
I C  0.84
Q C  0.82
A C  0.87
P C  0.86
P C  0.67
V C  0.45
V E  0.50
K C  0.50
S C  0.66
A C  0.82
Q C  0.91
A C  0.82
E C  0.86
G C  0.86
A C  0.67
K E  0.86
Q E  0.97
V E  0.98
I E  0.98
L E  0.97
T E  0.78
D C  0.68
H C  0.87
N C  0.83
E C  0.64
F C  0.58
Q C  0.59
Q C  0.63
S C  0.73
I C  0.51
A H  0.59
D H  0.61
I H  0.55
R C  0.51
E C  0.61
V C  0.83
E C  0.82
V E  0.77
V E  0.89
E E  0.97
V E  0.98
V E  0.91
D E  0.58
H C  0.70
H C  0.82
R C  0.83
V C  0.86
A C  0.90
N C  0.91
F C  0.82
E C  0.83
T C  0.85
A C  0.76
N C  0.80
P C  0.76
L C  0.53
Y E  0.62
M E  0.72
R E  0.70
L E  0.47
E C  0.86
P C  0.92
V C  0.86
G C  0.80
S C  0.53
A H  0.79
S H  0.96
S H  0.98
I H  0.98
V H  0.99
Y H  0.99
R H  0.99
L H  0.99
Y H  0.98
K H  0.95
E H  0.86
N C  0.75
G C  0.99
V C  0.97
A C  0.92
I C  0.93
P C  0.98
K H  0.92
E H  0.95
I H  0.98
A H  0.99
G H  0.99
V H  0.99
M H  0.98
L H  0.96
S H  0.91
G H  0.86
L H  0.87
I H  0.80
S H  0.65
D C  0.48
T C  0.54
L C  0.57
L C  0.54
L C  0.58
K C  0.69
S C  0.84
P C  0.90
T C  0.94
T C  0.94
H C  0.97
A H  0.50
S C  0.56
D C  0.66
P H  0.97
A H  0.98
V H  0.98
A H  0.99
E H  0.99
D H  0.99
L H  0.98
A H  0.97
K H  0.92
I H  0.79
A C  0.65
G C  0.97
V C  0.96
D C  0.96
L H  0.96
Q H  0.98
E H  0.98
Y H  0.98
G H  0.98
L H  0.99
A H  0.99
M H  0.99
L H  0.98
K H  0.92
A H  0.70
G C  0.62
T C  0.69
N C  0.69
L H  0.53
A C  0.51
S C  0.68
K C  0.79
T C  0.88
A H  0.95
A H  0.98
Q H  0.98
L H  0.98
V H  0.98
D H  0.95
I H  0.91
D H  0.82
A H  0.71
K H  0.59
T E  0.46
F E  0.64
E E  0.54
L C  0.64
N C  0.92
G C  0.90
S E  0.62
Q E  0.86
V E  0.86
R E  0.85
V E  0.85
A E  0.81
Q E  0.78
V E  0.69
N E  0.53
T E  0.49
V C  0.52
D C  0.74
I H  0.96
N H  0.96
E H  0.97
V H  0.96
L H  0.94
E H  0.87
R H  0.84
Q H  0.87
N H  0.93
E H  0.95
I H  0.98
E H  0.99
E H  0.99
A H  0.99
I H  0.99
K H  0.99
A H  0.99
S H  0.98
Q H  0.96
A H  0.89
A H  0.66
N C  0.71
G C  0.97
Y C  0.93
S C  0.85
D E  0.71
F E  0.95
V E  0.98
L E  0.98
M E  0.96
I E  0.91
T E  0.77
D C  0.47
I C  0.54
L C  0.59
N C  0.68
S C  0.84
N C  0.88
S C  0.74
E E  0.55
I E  0.69
L E  0.76
A E  0.78
L E  0.63
G C  0.74
N C  0.88
N C  0.56
T H  0.79
D H  0.85
K H  0.92
V H  0.92
E H  0.91
A H  0.88
A H  0.76
F H  0.51
N C  0.93
F C  0.86
T C  0.67
L C  0.62
K C  0.74
N C  0.87
N C  0.83
H E  0.63
A E  0.81
F E  0.73
L E  0.64
A E  0.49
G C  0.45
A E  0.39
V E  0.49
S C  0.38
R C  0.51
K C  0.51
K C  0.55
Q C  0.55
V C  0.45
V C  0.52
P H  0.50
Q H  0.63
L H  0.70
T H  0.73
E H  0.72
S H  0.65
F C  0.48
N C  0.91
G C  1.00
END

