
PFRMAT AL
TARGET T0087
AUTHOR 8734-6605-4366
METHOD Main features of the approach:
METHOD 1. Threading in an external energy field of 'the template results
METHOD    in an alignment of a target sequence on the template.
METHOD    The energy of the obtainedstructure is evaluated using
METHOD    phenomelogical potentials applied to Ca and Cb atoms.
METHOD 2. Averaging over homologs is used in energy calculations.
METHOD 3. "Fragmentation" gapless threading is used for the final
METHOD    selection of predictions
MODEL  3
PARENT 2req_C
M   1    I  156
S   2    P  157
K   3    L  158
I   4    D  159
L   5    Q  160
V   6    M  161
F   7    S  162
G   8    V  163
H   9    S  164
Q  10    M  165
N  11    T  166
P  12    M  167
D  13    N  168
S  14    G  169
D  15    A  170
A  16    V  171
I  17    L  172
G  18    P  173
S  19    I  174
S  20    L  175
M  21    A  176
A  22    L  177
Y  23    Y  178
A  24    V  179
Y  25    V  180
L  26    T  181
K  27    A  182
R  28    E  183
Q  29    E  184
L  30    Q  185
G  31    G  186
V  32    V  187
D  33    K  188
A  34    P  189
Q  35    E  190
A  36    Q  191
V  37    L  192
A  38    A  193
L  39    G  194
G  40    T  195
N  41    I  196
P  42    Q  197
N  43    N  198
E  44    D  199
E  45    I  200
T  46    L  201
A  47    K  202
F  48    E  203
V  49    F  204
L  50    M  205
D  51    V  206
Y  52    R  207
F  53    N  208
G  54    T  209
I  55    Y  210
Q  56    I  211
A  57    Y  212
P  58    P  213
P  59    P  214
V  60    Q  215
A  66    G  263
K  70    R  326
Q  71    T  327
V  72    H  328
I  73    S  329
L  74    Q  330
T  75    T  331
D  76    S  332
H  77    G  333
N  78    W  334
E  79    S  335
F  80    L  336
Q  81    T  337
Q  82    A  338
S  83    Q  339
I  84    D  340
A  85    V  341
D  86    Y  342
I  87    N  343
R  88    N  344
E  89    V  345
V  90    V  346
E  91    R  347
V  92    T  348
V  93    C  349
E  94    I  350
V  95    E  351
V  96    A  352
D  97    M  353
H  98    A  354
H  99    A  355
R 100    T  356
V 101    Q  357
A 102    G  358
N 103    H  359
F 104    T  360
E 105    Q  361
T 106    S  362
A 107    L  363
N 108    H  364
P 109    T  365
L 110    N  366
Y 111    S  367
M 112    L  368
R 113    D  369
L 114    E  370
E 115    A  371
P 116    I  372
V 117    A  373
G 118    L  374
S 119    P  375
A 120    T  376
S 121    D  377
S 122    F  378
I 123    S  379
V 124    A  380
Y 125    R  381
R 126    I  382
L 127    A  383
Y 128    R  384
K 129    N  385
E 130    T  386
N 131    Q  387
G 132    L  388
V 133    F  389
K 137    Q  392
E 138    E  393
I 139    S  394
A 140    G  395
G 141    T  396
V 142    T  397
M 143    R  398
L 144    V  399
S 145    I  400
G 146    D  401
L 147    P  402
I 148    W  403
S 149    S  404
D 150    G  405
T 151    S  406
L 152    A  407
L 153    Y  408
L 154    V  409
K 155    E  410
S 156    E  411
P 157    L  412
T 158    T  413
T 159    W  414
H 160    D  415
A 161    L  416
S 162    A  417
D 163    R  418
P 164    K  419
A 165    A  420
V 166    W  421
A 167    G  422
E 168    H  423
D 169    I  424
L 170    Q  425
A 171    E  426
K 172    V  427
I 173    E  428
A 174    K  429
G 175    V  430
V 176    G  431
D 177    G  432
L 178    M  433
Q 179    A  434
E 180    K  435
Y 181    A  436
G 182    I  437
L 183    E  438
A 184    K  439
M 185    G  440
L 186    I  441
K 187    P  442
A 188    K  443
G 189    M  444
T 190    R  445
N 191    I  446
L 192    E  447
A 193    E  448
S 194    A  449
K 195    A  450
T 196    A  451
A 197    R  452
A 198    T  453
Q 199    Q  454
L 200    A  455
V 201    R  456
D 202    I  457
I 203    D  458
D 204    S  459
A 205    G  460
K 206    R  461
T 207    Q  462
F 208    P  463
E 209    L  464
L 210    I  465
N 211    G  466
G 212    V  467
S 213    N  468
Q 214    K  469
V 215    Y  470
R 216    R  471
V 217    L  472
A 218    E  473
Q 219    H  474
V 220    E  475
N 221    P  476
T 222    P  477
V 223    L  478
D 224    D  479
I 225    V  480
N 226    L  481
E 227    K  482
V 228    V  483
L 229    D  484
E 230    N  485
R 231    S  486
Q 232    T  487
N 233    V  488
E 234    L  489
I 235    A  490
E 236    E  491
E 237    Q  492
A 238    K  493
I 239    A  494
K 240    K  495
A 241    L  496
S 242    V  497
Q 243    K  498
A 244    L  499
A 245    R  500
N 246    A  501
G 247    E  502
Y 248    R  503
S 249    D  504
D 250    P  505
F 251    E  506
V 252    K  507
L 253    V  508
M 254    K  509
I 255    A  510
T 256    A  511
D 257    L  512
I 258    D  513
L 259    K  514
N 260    I  515
S 261    T  516
N 262    W  517
S 263    A  518
E 264    A  519
I 265    G  520
L 266    N  521
A 267    P  522
L 268    D  523
G 269    D  524
N 270    K  525
N 271    D  526
T 272    P  527
D 273    D  528
K 274    R  529
V 275    N  530
E 276    L  531
A 277    L  532
A 278    K  533
F 279    L  534
N 280    C  535
F 281    I  536
T 282    D  537
L 283    A  538
K 284    G  539
N 285    R  540
N 286    A  541
H 287    M  542
A 288    A  543
F 289    T  544
L 290    V  545
A 291    G  546
G 292    E  547
A 293    M  548
V 294    S  549
S 295    D  550
R 296    A  551
K 297    L  552
K 298    E  553
Q 299    K  554
V 300    V  555
V 301    F  556
P 302    G  557
Q 303    R  558
L 304    Y  559
T 305    T  560
E 306    A  561
S 307    Q  562
F 308    I  563
N 309    R  564
G 310    T  565
TER
END


