
PFRMAT AL
TARGET T0086
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  3
PARENT 1b6f_A
E 16 V 12
I 17 I 13
P 18 P 14
A 19 A 15
P 22 A 16
Q 23 R 17
L 24 L 18
L 25 F 19
D 26 K 20
W 27 A 21
L 28 F 22
L 29 L 24
L 30 D 25
E 31 G 26
D 32 D 27
S 33 N 28
M 34 L 29
T 35 F 30
K 36 K 32
R 37 V 33
F 38 A 34
E 39 P 35
Q 40 Q 36
Q 41 A 37
G 42 I 38
K 43 S 39
T 44 S 40
V 45 V 41
S 46 E 42
V 47 N 43
T 48 I 44
M 49 E 45
I 50 G 46
R 51 N 47
E 52 G 48
G 53 G 49
F 54 P 50
V 55 G 51
E 56 T 52
Q 57 I 53
N 58 K 54
E 59 K 55
I 60 I 56
P 61 P 59
E 62 E 60
E 63 G 61
L 64 F 62
P 65 P 63
L 66 F 64
L 67 K 65
P 68 Y 66
K 69 V 67
E 70 K 68
S 71 D 69
R 72 R 70
L 75 V 71
R 76 D 72
E 77 E 73
I 78 V 74
L 79 D 75
L 80 H 76
C 81 T 77
A 82 N 78
D 83 F 79
L 88 K 80
A 89 Y 81
G 90 N 82
R 91 Y 83
T 92 S 84
V 93 V 85
V 94 I 86
P 95 P 90
V 96 I 91
S 97 G 92
T 98 D 93
L 99 T 94
S 100 L 95
G 101 E 96
P 102 K 97
E 103 I 98
L 104 S 99
A 105 N 100
L 106 E 101
Q 107 I 102
K 108 K 103
L 109 I 104
G 110 V 105
K 111 A 106
T 112 T 107
P 113 P 108
G 115 G 111
R 116 S 112
Y 117 I 113
L 118 L 114
F 119 K 115
T 120 I 116
S 121 S 117
S 122 N 118
T 123 K 119
L 124 Y 120
T 125 T 122
R 126 K 123
D 127 G 124
F 128 D 125
I 129 H 126
E 130 E 127
I 131 V 128
G 132 K 129
R 133 A 130
D 134 E 131
A 135 A 135
G 136 S 136
L 137 K 137
W 138 E 138
G 139 L 139
R 140 G 140
R 141 E 141
S 142 T 142
R 143 L 143
L 144 L 144
R 145 R 145
L 146 A 146
S 147 V 147
G 148 E 148
K 149 S 149
P 150 Y 150
L 151 L 151
L 152 L 152
L 153 A 153
T 154 H 154
TER
END

