
PFRMAT AL
TARGET T0086
AUTHOR 8971-8833-9593
METHOD FFAS (http://bioinformatics.burnham-inst.org/FFAS/)
METHOD Fold & Function Assignment System A profile-profile alignment method.
METHOD 1) PSI-Blast is used to collect homologs
METHOD 2) The sequences of homologs are translated into a profile
METHOD    [The translation is not based on PSI-Blast approach]
METHOD 3) Translated profile is aligned against a profile database
MODEL  2
PARENT 1qjg_F
A 4 A 9
L 5 V 10
T 6 V 11
Q 7 Q 12
R 12 R 13
Y 13 Y 14
C 14 V 15
K 15 A 16
E 16 A 17
I 17 L 18
P 18 N 19
A 19 A 20
L 20 G 21
D 21 D 22
P 22 L 23
Q 23 D 24
L 24 G 25
L 25 I 26
D 26 V 27
W 27 A 28
L 28 L 29
L 29 F 30
L 30 A 31
E 31 D 32
D 32 D 33
S 33 A 34
M 34 T 35
T 35 V 36
K 36 E 37
R 37 N 38
F 38 P 39
E 39 V 40
Q 40 G 41
Q 41 S 42
G 42 E 43
K 43 P 44
T 44 R 45
V 45 S 46
S 46 G 47
V 47 T 48
T 48 A 49
M 49 A 50
I 50 I 51
R 51 R 52
E 52 E 53
G 53 F 54
F 54 Y 55
V 55 A 56
E 56 N 57
Q 57 S 58
N 58 L 59
E 59 K 60
I 60 L 61
P 61 P 62
E 62 L 63
E 63 A 64
L 64 V 65
L 66 E 66
L 67 L 67
P 68 T 68
K 69 Q 69
E 70 E 70
S 71 V 71
R 72 R 72
Y 73 A 73
W 74 V 74
L 75 A 75
R 76 N 76
E 77 E 77
I 78 A 78
L 79 A 79
L 80 F 80
C 81 A 81
A 82 F 82
D 83 I 83
G 84 V 84
E 85 S 85
P 86 F 86
W 87 E 87
L 88 Y 88
A 89 Q 89
G 90 G 90
R 91 A 91
T 92 T 93
V 93 V 94
V 94 V 95
P 95 A 96
V 96 P 97
S 97 I 98
T 98 D 99
L 99 H 100
S 100 F 101
G 101 R 102
P 102 F 103
E 103 N 104
L 104 G 105
A 105 A 106
G 110 G 107
K 111 K 108
T 112 V 109
P 113 V 110
L 114 S 111
G 115 M 112
R 116 R 113
Y 117 A 114
L 118 L 115
F 119 F 116
T 120 G 117
S 121 E 118
TER
END

