
PFRMAT AL
TARGET T0086
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.66
REMARK CONFIDENCE: GUESS (ZSCORE>3.5) 
REMARK DERIVED FROM HOMSTRAD PROFILE: hs1dcea
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution 
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  4
PARENT 1lou_A
L   11    M     A1
R   12    R     A2
Y   13    R     A3
C   14    Y     A4
K   15    E     A5
E   16    V     A6
I   17    N     A7
P   18    I     A8
A   19    V     A9
L   20    L    A10
D   21    N    A11
P   22    P    A12
Q   23    N    A13
L   24    L    A14
E   56    D    A15
Q   57    Q    A16
N   58    S    A17
E   59    Q    A18
I   60    L    A19
P   61    A    A20
E   62    L    A21
E   63    E    A22
L   64    K    A23
P   65    E    A24
L   66    I    A25
L   67    I    A26
P   68    Q    A27
K   69    R    A28
E   70    A    A29
S   71    A    A30
R   72    E    A31
Y   73    N    A32
W   74    Y    A33
R   91    G    A34
T   92    A    A35
V   93    R    A36
V   94    V    A37
P   95    E    A38
V   96    K    A39
S   97    V    A40
T   98    E    A41
L   99    E    A42
S  100    L    A43
G  101    G    A44
P  102    L    A45
E  103    R    A46
L  104    R    A47
A  105    L    A48
L  106    A    A49
Q  107    Y    A50
K  108    P    A51
L  109    I    A52
G  110    A    A53
K  111    K    A54
T  112    D    A55
P  113    P    A56
L  114    Q    A57
G  115    G    A58
R  116    Y    A59
Y  117    F    A60
L  118    L    A61
F  119    W    A62
T  120    Y    A63
S  121    Q    A64
S  122    V    A65
T  123    E    A66
L  124    M    A67
T  125    P    A68
G  132    E    A69
R  133    D    A70
D  134    R    A71
A  135    V    A72
G  136    N    A73
L  137    D    A74
W  138    L    A75
G  139    A    A76
R  140    R    A77
R  141    E    A78
S  142    L    A79
R  143    R    A80
L  144    I    A81
R  145    R    A82
L  146    D    A83
S  147    N    A84
G  148    V    A85
K  149    R    A86
P  150    R    A87
L  151    V    A88
L  152    M    A89
L  153    V    A90
T  154    V    A91
E  155    K    A92
L  156    S    A93
F  157    Q    A94
L  158    E    A95
P  159    P    A96
A  160    F    A97
TER
END

