
PFRMAT AL
TARGET T0086
AUTHOR 3359-3308-3659
REMARK FUGUE AUTOMATIC ALIGNMENT
REMARK ZSCORE=3.75
REMARK CONFIDENCE: GUESS (ZSCORE >=3.5)
REMARK DERIVED FROM HOMSTRAD PROFILE: hsd1ft1a
METHOD Environment-specific substitution tables were derived from the structure-based
METHOD alignments in the HOMSTRAD database. Each alignment in HOMSTRAD was converted
METHOD into a scoring template (profile) using the environment-specific substitution
METHOD tables and environment-dependent gap penalties. The program FUGUE searches
METHOD a sequence or sequence alignment against the library of profiles.
MODEL  2
PARENT 1ft1_A
S    1    D    A59
H    2    S    A60
P    3    P    A61
A    4    T    A62
L    5    Y    A63
T    6    V    A64
Q    7    L    A65
L    8    Y    A66
R    9    R    A67
A   10    D    A68
C   14    R    A69
K   15    A    A70
E   16    E    A71
I   17    W    A72
P   18    A    A73
A   19    D    A74
L   20    I    A75
D   21    D    A76
P   22    P    A77
Q   23    D   A101
L   24    Y   A102
L   25    F   A103
D   26    R   A104
W   27    A   A105
L   28    V   A106
L   29    L   A107
L   30    Q   A108
E   31    R   A109
D   32    D   A110
S   33    E   A111
M   34    R   A112
T   35    S   A113
K   36    E   A114
R   37    R   A115
F   38    I   A124
E   39    E   A125
Q   40    L   A126
Q   41    N   A127
G   42    A   A128
K   43    A   A129
T   44    N   A130
V   45    Y   A131
S   46    T   A132
V   47    V   A133
T   48    W   A134
M   49    H   A135
I   50    F   A136
R   51    R   A137
E   52    R   A138
G   53    V   A139
F   54    L   A140
V   55    L   A141
E   56    R   A142
Q   57    Q   A145
N   58    K   A146
E   59    D   A147
I   60    L   A148
P   61    Q   A149
E   62    E   A150
E   63    E   A151
L   64    M   A152
P   65    N   A153
L   66    Y   A154
L   67    I   A155
P   68    I   A156
K   69    A   A157
E   70    I   A158
S   71    I   A159
R   72    E   A160
Y   73    W   A169
W   74    H   A170
L   75    H   A171
R   76    R   A172
E   77    R   A173
I   78    V   A174
L   79    L   A175
L   80    V   A176
C   81    E   A177
A   82    W   A178
D   83    L   A179
G   84    K   A180
E   85    D   A181
P   86    P   A182
W   87    S   A183
L   88    Q   A184
A   89    E   A185
G   90    L   A186
R   91    E   A187
T   92    F   A188
V   93    I   A189
V   94    A   A190
P   95    D   A191
V   96    I   A192
S   97    L   A193
T   98    N   A194
L   99    Q   A195
S  100    D   A196
G  101    A   A197
P  102    K   A198
E  103    N   A199
L  104    Y   A200
A  105    H   A201
L  106    A   A202
Q  107    W   A203
K  108    Q   A204
L  109    H   A205
G  110    R   A206
K  111    Q   A207
T  112    W   A208
P  113    V   A209
L  114    I   A210
G  115    Q   A211
R  116    R   A214
Y  117    L   A215
L  118    W   A216
F  119    D   A217
T  120    N   A218
S  121    E   A219
S  122    L   A220
T  123    Q   A221
L  124    Y   A222
T  125    V   A223
R  126    D   A224
D  127    Q   A225
F  128    L   A226
I  129    L   A227
E  130    K   A228
I  131    E   A229
G  132    V   A231
R  133    R   A232
D  134    N   A233
A  135    N   A234
G  136    S   A235
L  137    V   A236
W  138    W   A237
G  139    N   A238
R  140    Q   A239
R  141    R   A240
S  142    H   A241
R  143    F   A242
L  144    V   A243
R  145    I   A244
L  146    S   A245
S  147    S   A251
G  148    D   A252
K  149    R   A253
P  150    A   A254
L  151    V   A255
L  152    L   A256
L  153    E   A257
T  154    R   A258
E  155    E   A259
L  156    V   A260
F  157    Q   A261
L  158    Y   A262
P  159    T   A263
A  160    L   A264
S  161    E   A265
P  162    M   A266
L  163    I   A267
Y  164    K   A268
TER
END

