PFRMAT AL 
TARGET T0083 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 1 
PARENT 1pbx_B 
M 1     S 9     
I 2     I 10    
Q 3     I 11    
S 4     S 12    
Q 5     D 13    
I 6     I 14    
N 7     F 15    
R 8     S 16    
N 9     H 17    
I 10    M 18    
R 11    D 19    
L 12    Y 20    
D 13    D 21    
L 14    D 22    
A 15    I 23    
D 16    G 24    
A 17    P 25    
I 18    K 26    
L 19    A 27    
L 20    L 28    
S 21    S 29    
K 22    R 30    
A 23    C 31    
K 24    L 32    
K 25    I 33    
D 26    V 34    
L 27    Y 35    
S 28    P 36    
F 29    W 37    
A 30    T 38    
E 31    Q 39    
REMARK REF GAP 1 
A 33    R 40    
D 34    H 41    
G 35    F 42    
T 36    S 43    
G 37    G 44    
L 38    F 45    
A 39    G 46    
E 40    N 47    
A 41    L 48    
F 42    Y 49    
V 43    N 50    
T 44    A 51    
A 45    E 52    
A 46    A 53    
L 47    I 54    
L 48    I 55    
G 49    G 56    
Q 50    N 57    
Q 51    A 58    
A 52    N 59    
L 53    V 60    
P 54    A 61    
A 55    A 62    
D 56    H 63    
A 57    G 64    
A 58    I 65    
R 59    K 66    
L 60    V 67    
V 61    L 68    
REMARK TAR GAP 1 
G 62    G 70    
A 63    L 71    
K 64    D 72    
L 65    R 73    
D 66    G 74    
L 67    V 75    
D 68    K 76    
E 69    N 77    
D 70    M 78    
S 71    D 79    
I 72    N 80    
L 73    I 81    
L 74    A 82    
L 75    A 83    
Q 76    T 84    
M 77    Y 85    
I 78    A 86    
P 79    D 87    
L 80    L 88    
R 81    S 89    
G 82    T 90    
C 83    L 91    
I 84    H 92    
D 85    S 93    
D 86    E 94    
R 87    K 95    
I 88    L 96    
P 89    H 97    
T 90    V 98    
D 91    D 99    
P 92    P 100   
T 93    D 101   
M 94    N 102   
Y 95    F 103   
R 96    K 104   
F 97    L 105   
REMARK REF GAP 2 
M 100   L 106   
L 101   S 107   
Q 102   D 108   
V 103   C 109   
Y 104   I 110   
G 105   T 111   
T 106   I 112   
T 107   V 113   
L 108   L 114   
K 109   A 115   
A 110   A 116   
L 111   K 117   
V 112   M 118   
H 113   G 119   
E 114   H 120   
K 115   A 121   
F 116   F 122   
G 117   T 123   
D 118   A 124   
G 119   E 125   
I 120   T 126   
I 121   Q 127   
S 122   G 128   
A 123   A 129   
I 124   F 130   
N 125   Q 131   
F 126   K 132   
K 127   F 133   
L 128   L 134   
D 129   A 135   
V 130   V 136   
K 131   V 137   
K 132   V 138   
V 133   S 139   
A 134   A 140   
D 135   L 141   
P 136   G 142   
E 137   K 143   
G 138   Q 144   
G 139   Y 145   
E 140   H 146   
TER 
END 
