PFRMAT AL 
TARGET T0080  
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 2 
PARENT 1ova_B 
K 80 R 139 
G 81 G 140 
H 82 G 141 
L 83 L 142 
T 84 E 143 
R 85 P 144 
L 86 I 145 
G 87 N 146 
L 88 F 147 
E 89 Q 148 
F 90 T 149 
F 91 A 149A 
D 92 A 150 
Q 93 D 151 
P 94 Q 152 
A 95 A 153 
V 96 R 154 
P 97 E 155 
L 98 L 156 
A 99 I 157 
R 100 N 158 
A 101 S 159 
F 102 W 160 
L 103 V 161 
G 104 E 162 
Q 105 S 163 
V 106 Q 164 
REMARK TAR GAP 3 
L 107 I 168 
V 108 I 169 
R 109 R 170 
R 110 N 171 
L 111 V 172 
P 112 L 173 
N 113 Q 174 
G 114 P 175 
T 115 S 176 
E 116 S 177 
L 117 V 178 
R 118 D 179 
G 119 S 179A 
R 120 Q 179B 
REMARK TAR GAP 4 
I 121 L 184 
V 122 V 185 
E 123 N 186 
T 124 A 187 
E 125 I 188 
A 126 V 189 
Y 127 F 190 
L 128 K 191 
G 129 G 192 
P 130 L 193 
E 131 W 194 
D 132 E 195 
E 133 K 196 
A 134 A 197 
A 135 F 198 
H 136 K 199 
S 137 D 200 
R 138 E 201 
G 139 D 202 
G 140 T 203 
R 141 Q 204 
Q 142 A 205 
T 143 M 206 
P 144 P 207 
R 145 F 208 
N 146 R 209 
REMARK REF GAP 3 
F 150 V 210 
M 151 T 211 
K 152 E 212 
P 153 Q 213 
G 154 E 214 
T 155 S 215 
L 156 K 216 
Y 157 P 217 
V 158 V 218 
Y 159 Q 219 
I 160 M 220 
I 161 M 221 
Y 162 Y 222 
REMARK TAR GAP 2 
G 163 G 225 
M 164 L 226 
Y 165 F 227 
F 166 R 228 
C 167 V 229 
M 168 A 230 
N 169 S 231 
I 170 M 232 
S 171 A 233 
S 172 S 234 
Q 173 E 235 
REMARK TAR GAP 9 
G 174 A 245 
D 175 S 245A 
G 176 G 246 
A 177 T 247 
C 178 M 248 
V 179 S 249 
L 180 M 250 
L 181 L 251 
R 182 V 252 
A 183 L 253 
L 184 L 254 
REMARK TAR GAP 1 
E 185 D 256 
P 186 E 256A 
L 187 V 257 
E 188 S 258 
G 189 G 259 
L 190 L 260 
E 191 E 261 
T 192 Q 262 
M 193 L 263 
R 194 E 264 
Q 195 S 265 
L 196 I 266 
R 197 I 267 
S 198 N 268 
REMARK TAR GAP 2 
T 199 K 271 
L 200 L 272 
R 201 T 273 
K 202 E 274 
G 203 W 275 
T 204 T 276 
A 205 S 277 
S 206 S 278 
R 207 N 279 
V 208 V 280 
L 209 M 281 
K 210 E 281A 
D 211 E 281B 
R 212 R 282 
E 213 K 283 
L 214 I 284 
C 215 K 285 
S 216 V 286 
REMARK TAR GAP 11 
G 217 N 298 
P 218 L 299 
S 219 T 300 
K 220 S 301 
L 221 V 302 
C 222 L 303 
Q 223 M 304 
A 224 A 305 
L 225 M 306 
A 226 G 307 
I 227 I 308 
N 228 T 309 
K 229 D 310 
S 230 V 311 
F 231 F 312 
D 232 S 313 
Q 233 S 314 
REMARK TAR GAP 10 
R 234 E 325 
D 235 S 326 
L 236 L 327 
A 237 K 328 
Q 238 I 329 
D 239 S 330 
E 240 Q 331 
A 241 A 332 
V 242 V 333 
W 243 H 334 
L 244 A 335 
E 245 A 336 
R 246 H 337 
G 247 A 338 
P 248 E 339 
L 249 I 340 
E 250 N 341 
P 251 E 342 
S 252 A 343 
E 253 G 344 
P 254 R 345 
A 255 E 346 
V 256 V 347 
V 257 V 348 
A 258 G 349 
A 259 S 350 
A 260 A 351 
R 261 E 352 
V 262 A 353 
G 263 G 354 
V 264 V 355 
G 265 D 356 
H 266 A 357 
A 267 A 358 
G 268 S 359 
E 269 V 360 
W 270 S 361 
A 271 E 363 
R 272 E 363 
REMARK REF GAP 5 
Y 278 F 364 
V 279 R 365 
R 280 A 366 
G 281 D 367 
S 282 H 368 
P 283 P 369 
W 284 F 370 
V 285 L 371 
S 286 F 372 
V 287 C 373 
V 288 I 374 
D 289 K 375 
R 290 H 376 
V 291 I 377 
A 292 A 378 
E 293 T 379 
Q 294 N 380 
D 295 A 381 
TER 
END 
