PFRMAT AL 
TARGET T0075 
AUTHOR 9808-8259-1323 
METHOD Searched 1962 pdb sequences with max. 90% identity using a 
METHOD sequence profile based on alignment below and PAM250.  
REMARK 
REMARK Alignment used for sequence profile: 
REMARK    
REMARK GP:HSCETS1_2       1 MECADVPLLTPSSKEMMSQALK..ATFS.G.F..TKEQQRLGIPKDPR 
REMARK SW:ETS1_MOUSE      1 MECADVPLLTPSSKEMMSQALK..ATFS.G.F..TKEQQRLGIPKDPR 
REMARK PIR:TVCHTE         1 MECADVPLLTPSSKEMMSQALK..ATFS.G.F..AKEQQRLGIPKDPQ 
REMARK SW:ETS2_CHICK      1 SNNCELPLLTPCSKAVMSQALK..DTFS.G.F..TKEQCRLGIPNNPW 
REMARK SW:ETS2_HUMAN      1 SANCELPLLTPCSKAVMSQALK..ATFS.G.F..KKEQRRLGIPKNPW 
REMARK SW:ETS2_MOUSE      1 SASCELPLLTPCSKAVMSQALK..ATFS.G.F..QKEQRRLGIPKNPW 
REMARK SW:ET1A_XENLA      1 MECADVPLLTPSSKEMMSQALR..ATFS.R.F..TKEQQRLGIPIDPR 
REMARK GP:AF057716_1      1 SANCELPLLTPCSKAVMSQALK..ATFS.G.F..KKEQRRLGIPKSPW 
REMARK SW:ET2B_XENLA      1 SSSCELPLLTPCSKAVMSQALK..DTFN.G.F..AKERCRLGIPGNPW 
REMARK PIR:I48291         1 MECADVPLSTPSSKEMMSQALK..SYFS.G.F..TKEQQRRGIPKDPR 
REMARK SW:ET2A_XENLA      1 SSSCELPLLTPCSKAVMSQALK..NTFN.G.F..AKKRFRLGILSNPW 
REMARK SW:GABA_HUMAN      1 ITLDGTKHITTISDETSEQVTRWAAALE.G.Y..RKEQERLGIPYDPI 
REMARK GP:AF057717_1      1 ITLDGTKHITTISDETSEQVTRWAAALE.G.Y..RKEQERLGIPYDPI 
REMARK SW:PNT2_DROME      1 EVPTALPPLTPGTNRKVNEVLK..ASFA.S.W..EKEVQKCNITKDPR 
REMARK GP:SUSETS_1        1 DLHPAVPPPTPGTNALMNACLR..ESFS.S.F..KKEQERLGIPKDPS 
REMARK SW:FLI1_MOUSE      1 KLVGGGEANPMNYNSYMDEKNG..PPPP.N.M..TTNERRVIVPADPT 
REMARK GP:HUMERGBFLI_1    1 KLVGGGESNPMNYNSYMDEKNG..PPPP.N.M..TTNERRVIVPADPT 
REMARK PIR:S60754         1 KMVSSSDNVGMNYGSYMEEKHI...PPP.N.M..TTNERRVIVPADPT 
REMARK SW:ERG_HUMAN       1 GKMVGSPDTVGMNYGSYMEEKHM..PPP.N.M..TTNERRVIVPADPT 
REMARK GP:CCFLIONCO_1     1 KLVGAGTESNPMSYSTYMDEKN..GPPP.N.M..TTNERRVIVPADPT 
REMARK SW:FLI1_XENLA      1 SKLIGGSEGNAMTYTYMDEKNG..PPPP.N.M..TTNERRVIVPADPA 
REMARK SW:ELG_DROME       1 EDSEEESVEGKDVKPVLNWVLD..SKF.......KREQIRLKIPEAAN 
REMARK PIR:S29844         1 KLVGGGESNPMNYNSYMDEKNG..PPPP.N.M..TTNERRVIVPADAT 
REMARK GP:HSBREAKP3_1     1 .TPPESPVPSYASSTPLHVPVPRALRME.E....DSIRLPAHLRLQPI 
REMARK GP:MMTEL_1         1 ERISYTPPESPVASHRSSTPLHVHTVPRALRMEEDSIHLPTHLRLQPI 
REMARK SW:POK_DROME       1 KMLPVQLSLNSLNPGIWSDVLWRCPPAPSSQLAELKTQLPPSLPSDPR 
REMARK    
REMARK GP:HSCETS1_2      51 QWTETHVRDWVMWAVNEFSLKGVDFQKFC.MNGAALCALGKDCFLELAPD 
REMARK SW:ETS1_MOUSE     51 QWTETHVRDWVMWAVNEFSLKGVDFQKFC.MSGAALCALGKECFLELAPD 
REMARK PIR:TVCHTE        51 QWTETHVRDWVMWAVNEFSLKGVDFQKFC.MNGAALCALGKECFLELAPD 
REMARK SW:ETS2_CHICK     51 LWTEQHVCQWLAWATNEFSLANVNIHQFL.MSGQDLCNLGKERFLELAPD 
REMARK SW:ETS2_HUMAN     51 LWSEQQVCQWLLWATNEFSLVNVNLQRFG.MNGQMLCNLGKERFLELAPD 
REMARK SW:ETS2_MOUSE     51 LWSEQQVCQWLLWATNEFSLVNVNLHQFG.MNGQMLCNLGKERFLELAPD 
REMARK SW:ET1A_XENLA     51 EWTDMHVREWVSWAVNEFTLKGVDFQKFC.MSGAALCALGKECFLELAPD 
REMARK GP:AF057716_1     51 LWTEQQVCQWLLWATNEFSLVDVNLQRFG.MTGQVLCNLGKERFLELAPD 
REMARK SW:ET2B_XENLA     51 LWDENNVLQWLLWAAKEFSLENVNFQKFL.MNGHELCSLGKERFLALAPD 
REMARK PIR:I48291        51 QWTDTHVRDWVMWAVNEFSLKGVDFHKFC.MSGAAVCALGKECFLELAPD 
REMARK SW:ET2A_XENLA     51 LWDENNVFQWLWWAAKEFSLQNVNFQKFL.MNGHELCSLGKERFLALAPD 
REMARK SW:GABA_HUMAN     51 QWSTDQVLHWVVWVMKEFSMTDIDLTTLN.ISGRELCSLNQEDFFQRVPR 
REMARK GP:AF057717_1     51 QWSTDQVLHWVVWVMKEFSMTDIHLTTLN.ISGRELCSLSQEDFFQRVPR 
REMARK SW:PNT2_DROME     51 EWTEEHVIYWLNWAKNEFSLVSMNLDPFYKMKGRAMVDLGKEKFLAITPP 
REMARK GP:SUSETS_1       51 RWSECQVVAWVHWSIKEFSLEGVSINNFR.ISGRDLCTLPKTDFLSRAPP 
REMARK SW:FLI1_MOUSE     51 LWTQEHVRQWLEWAIKEYGLMEIDTSFFQNMDGKELCKMNKEDFLRATSA 
REMARK GP:HUMERGBFLI_1   51 LWTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTL 
REMARK PIR:S60754        51 LWSTDHVRQWLEWAVKEYGLPDVDILLFQNIDGKELCKMTKDDFQRLTPS 
REMARK SW:ERG_HUMAN      51 LWSTDHVRQWLEWAVKEYGLPDVNILLFQNIDGKELCKMTKDDFQRLTPS 
REMARK GP:CCFLIONCO_1    51 LWTQEHVRQWLEWAIKEYGLMEIDTTFFQNMDGKELCKMNKDDFLRTTSL 
REMARK SW:FLI1_XENLA     51 LWSQDHVRQWLEWAIKEYGLVEIDCSLFQNIDGKELCKMSKEDFLRSTSI 
REMARK SW:ELG_DROME      51 EWTHAHVTYWLEWAVKQFELVGINMSDWQ.MNGQELCAMTHEEFNQKLPR 
REMARK PIR:S29844        51 LVTQEHVRQWLEWAIKEYSLMEIDTSFFQNMDGKELCKMNKEDFLRATTL 
REMARK GP:HSBREAKP3_1    51 YWSRDDVAQWLKWAENEFSLRPIDSNTFE.MNGKALLLLTKEDFRYRSPH 
REMARK GP:MMTEL_1        51 YWSRDDVAQWLKWAENEFSLRPIESNKFE.MNGKALLLLTKEDFRYRSPH 
REMARK SW:POK_DROME      51 LWSREDVLVFLRFCVREFDLPKLDFDLFQ.MNGKALCLLTRADFGHRCPG 
REMARK    
REMARK GP:HSCETS1_2     101 FVGDILWEHLEILQKEDVK 
REMARK SW:ETS1_MOUSE    101 FVGDILWEHLEILQKEDVK 
REMARK PIR:TVCHTE       101 FVGDILWEHLEILQKEEAK 
REMARK SW:ETS2_CHICK    101 YVGDILWEHLEQMIKDSQE 
REMARK SW:ETS2_HUMAN    101 FVGDILWEHLEQMIKENQE 
REMARK SW:ETS2_MOUSE    101 FVGDILWEHLEQMIKENQE 
REMARK SW:ET1A_XENLA    101 FVGDILWEHLEILQKDSKQ 
REMARK GP:AF057716_1    101 FVGDILWEHLEQMIKENQE 
REMARK SW:ET2B_XENLA    101 FVGDILWEHLEEMMKEYQE 
REMARK PIR:I48291       101 FVGDILWEHLEILQKEDVK 
REMARK SW:ET2A_XENLA    101 FVGDILWEHLEEMMKEHQE 
REMARK SW:GABA_HUMAN    101 ..GEILWSHLELLRKYVLA 
REMARK GP:AF057717_1    101 ..GEILWSHLELLRKYVLA 
REMARK SW:PNT2_DROME    101 FTGDILWEHLDILQKDCEK 
REMARK GP:SUSETS_1      101 FMGDILWEHIDMLRKECDP 
REMARK SW:FLI1_MOUSE    101 YNTEVLLSHLSYLRESSLL 
REMARK GP:HUMERGBFLI_1  101 YNTEVLLSHLSYLRESSLL 
REMARK PIR:S60754       101 YNADILLSHLHYLRETPLP 
REMARK SW:ERG_HUMAN     101 YNADILLSHLHYLRETPLP 
REMARK GP:CCFLIONCO_1   101 YNTEVLLSHLSYLRESSSL 
REMARK SW:FLI1_XENLA    101 YNTEVLLSHLNYLRDSSSS 
REMARK SW:ELG_DROME     101 DPGNIFWTHLQ.LLKECNF 
REMARK PIR:S29844       101 YNTEVLLSHLSYLRESSLL 
REMARK GP:HSBREAKP3_1   101 .SGDVLYELLQHILKQRKP 
REMARK GP:MMTEL_1       101 .SGDVLYELLQHILKQRKS 
REMARK SW:POK_DROME     101 .AGDVLHNVLQMLIIESHM 
REMARK    
REMARK    
REMARK Search results: 
REMARK   alignment method = FIT_PRF 
REMARK           Name               ZScore Score Length   Documentation .. 
REMARK pdb90:1cjl                +   8.30   3.77  307. !  Resolution=2.20  307 residues MOL_ID: 1; 
REMARK pdb90:2brd                +   6.17   2.88  222. !  Resolution=3.50  222 residues MOL_ID: 1; 
REMARK pdb90:1czj                +   5.18   2.46  110. !  Resolution=2.16  110 residues MOL_ID: 1; 
REMARK pdb90:1axn                +   4.81   2.31  323. !  Resolution=1.78  323 residues MOL_ID: 1; 
REMARK 
REMARK Alignment: 
REMARK    
REMARK t0075.pep                  1 MECADVPLLTPSSKEMMSQALK..ATFS.G.F..TKEQQRLGIPKDPRQW 
REMARK 1CJL                       1 .................................................. 
REMARK   Consensus                1 KMVPDAPVLTPSTKPIMDQVLRWCPPFPSGRFEEKKEQRRLGIPNDPRLW 
REMARK    
REMARK t0075.pep                 45 T.ETHVRDWVMWAVNEFSLKGVDFQKFC....MSGAALCALGKECFLELA 
REMARK 1CJL                       1 .DHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGK 
REMARK   Consensus               51 T.QDHVRHWLQWAIKEFGLMDIDLDKFQN...MDGRELCKLGKEDFLHRT 
REMARK    
REMARK t0075.pep                 90 PDFV......GDILWEHLEILQKEDVK 
REMARK 1CJL                      50 HSFTMAMNAFGDMTSEEFRQVMNGLQN 
REMARK   Consensus              101 PHYT......GDILWDHLQYLRKECQP 
REMARK    
REMARK    
MODEL 1  
PARENT 1CJL 
E  74    H 6P 
T  75    S 7P 
H  76    L 8P 
V  77    E 9P 
R  78    A 10P 
D  79    Q 11P 
W  80    W 12P 
V  81    T 13P 
M  82    K 14P 
W  83    W 15P 
A  84    K 16P 
V  85    A 17P 
N  86    M 18P 
E  87    H 19P 
F  88    N 20P 
S  89    R 21P 
L  90    L 22P 
K  91    Y 23P 
G  92    G 24P 
V  93    M 25P 
D  94    N 26P 
F  95    E 27P 
Q  96    E 28P 
K  97    G 29P 
F  98    W 30P 
C  99    R 31P 
M 100    E 36P 
S 101    K 37P 
G 102    N 38P 
A 103    M 39P 
A 104    K 40P 
L 105    M 41P 
C 106    I 42P 
A 107    E 43P 
L 108    L 44P 
G 109    H 45P 
K 110    N 46P 
E 111    Q 47P 
C 112    E 48P 
F 113    Y 49P 
L 114    R 50P 
E 115    E 51P 
L 116    G 52P 
A 117    K 53P 
P 118    H 54P 
D 119    S 55P 
F 120    F 56P 
V 121    T 57P 
G 122    G 64P 
D 123    D 65P 
I 124    M 66P 
L 125    T 67P 
W 126    S 68P 
E 127    E 69P 
H 128    E 70P 
L 129    F 71P 
E 130    R 72P 
I 131    Q 73P 
L 132    V 74P 
Q 133    M 75P 
K 134    N 76P 
E 135    G 77P 
D 136    L 78P 
V 137    Q 79P 
K 138    N 80P 
TER 
END 
