PFRMAT AL 
TARGET T0070 
AUTHOR 9808-8259-1323 
METHOD Searched 1962 pdb sequences with max. 90% identity using a 
METHOD sequence profile based on alignment below and PAM250.  
REMARK 
REMARK Alignment used for sequence profile: 
REMARK    
REMARK t0070.pep                  1 QSSVTLFGIVDTNVAYVNKDAAGDSRYGLGTSGASTS 
REMARK SW:OM32_COMAC             20 QSSVTLFGIVDTNVAYVNKDAAGDSRYGLGTSGASTS 
REMARK GP:BCUOPCP1_1             21 QSSVTLYGVLDAGITYQS.NVGGKSLWSMGSGV.YQS 
REMARK    
REMARK t0070.pep                 38 RLGLRGTEDLGGGLKAGFWLEGEIFGDDGNAS..GFNFKRRSTVSLSGN 
REMARK SW:OM32_COMAC             57 RLGLRGTEDLGGGLKAGFWLEGEIFGDDGNAS..GFNFKRRSTVSLSGN 
REMARK GP:BCUOPCP1_1             56 RFGLRGSEDLGGGLKAIFTLESGFNIGNGKLGNNGGMFNRQAFVGLSSQ 
REMARK    
REMARK t0070.pep                 85 FGEVRLGRDLVPTSQKLTSYDLFSATGIGPFMGFRNWAAGQGADD.NGIR 
REMARK SW:OM32_COMAC            104 FGEVRLGRDLVPTSQKLTSYDLFSATGIGPFMGFRNWAAGQGADD.NGIR 
REMARK GP:BCUOPCP1_1            105 YGTVTLGKQYDATQDYLAPLTATGSWG.GTY..FAHPINNDRLSTNGDVA 
REMARK    
REMARK t0070.pep                134 ANNLISYYTPNFGGFNAGFGYAFDEKQTIGTADSVGRYIGGY 
REMARK SW:OM32_COMAC            153 ANNLISYYTPNFGGFNAGFGYAFDEKQTIGTADSVGRYIGGY 
REMARK GP:BCUOPCP1_1            152 LNNSIKYTSANYAGLQFGGTYSFSNNTNFG....NNRRYSAG 
REMARK    
REMARK t0070.pep                176 VAYDNGPLSASLGLAQ.........QKTAVGGLATDRDEITLGASYNFGV 
REMARK SW:OM32_COMAC            195 VAYDNGPLSASLGLAQ.........QKTAVGGLATDRDEITLGASYNFGV 
REMARK GP:BCUOPCP1_1            190 AAYQFQGLKLAAAYSQANLGDGTNTSGASSINAQGRVRTYGAAAGYAFGP 
REMARK    
REMARK t0070.pep                217 AKLSGLLQQTKFK..RDIGGDIKTNSYM 
REMARK SW:OM32_COMAC            236 AKLSGLLQQTKFK..RDIGGDIKTNSYM 
REMARK GP:BCUOPCP1_1            240 AQVGAAWTQSRIDNQANGVGTLRADNYE 
REMARK    
REMARK t0070.pep                243 LGASAPVGGVGEVKLQYALYDQK..AIDSKAHQITLGYVHNLSKRTALYG 
REMARK SW:OM32_COMAC            262 LGASAPVGGVGEVKLQYALYDQK..AIDSKAHQITLGYVHNLSKRTALYG 
REMARK GP:BCUOPCP1_1            268 VNAKYNLTPALGLGAAYTYTNAKVNNGSSHWNQFGVQADYALSKRTDVYA 
REMARK    
REMARK t0070.pep                291 NLAFLKNKDASTLGLQAKGVYAGGVQAGES....QTGVQVGIRH 
REMARK SW:OM32_COMAC            310 NLAFLKNKDASTLGLQAKGVYAGGVQAGES....QTGVQVGIRH 
REMARK GP:BCUOPCP1_1            318 QAVY..QRGAKGNNIVGTGIYNGDNTTASSSSINQTAATVGLRH 
REMARK    
REMARK t0070.pep                331 AF 
REMARK SW:OM32_COMAC            350 AF 
REMARK GP:BCUOPCP1_1            360 RF 
REMARK    
REMARK    
REMARK Search results: 
REMARK           Name               ZScore Score Length   Documentation .. 
REMARK pdb90:2omf                +  14.73  13.10  340. !  Resolution=2.40  340 residues MOL_ID: 1; 
REMARK pdb90:1pho                +  13.14  12.03  330. !  Resolution=3.00  330 residues PHOSPHOPORIN (PHOE) 
REMARK pdb90:2por                +  11.65  11.03  301. !  Resolution=1.80  301 residues PORIN (CRYSTAL FORM B) 
REMARK pdb90:1prn                +   6.40   7.50  289. !  Resolution=1.96  289 residues PORIN 
REMARK 
REMARK Alignment: 
REMARK    
REMARK t0070.pep                  1 QSSVTLFGIVDTNVAYVNKDAAGDSRYGLGTSGASTSRLGLRGTEDLGGG 
REMARK 1pho.seq                   8 GNKLDVYGKVKA.MHYMS..DNXXXXXASKDGDQSYIRFGFKGETQINDQ 
REMARK   Consensus                1 QSSVTLYGILDTGITYVNKDVGGKSRWGMGTGGAYQSRFGLRGTEDLGGG 
REMARK    
REMARK t0070.pep                 51 LKAGFWLEGEIFGDDGNAS...GFNFKRRSTVSLS.GNFGEVRLGRDLVP 
REMARK 1pho.seq                  55 LTGYGRWEAEFAGNKAESDTXXAQQKTRLAFAGLKYKDLGSFDYGRNLGA 
REMARK   Consensus               51 LKAGFWLEGGFFGGDGKLGD.DGFMFKRRAFVGLS.GQYGEVRLGREYVP 
REMARK    
REMARK t0070.pep                 97 TSQKLTSYDLFSATGIGPFMGFRNWAAGQGADD.NGIRANNLISYYTPNF 
REMARK 1pho.seq                 105 LYDVEAWTDMFPEFG.GDS........SAQTDNFMTKRASGLATYRNTDF 
REMARK   Consensus              101 TQEFLTPYDLFGAWGIGPYMGFRHWIDGERLDDDGGIRLDDLIKYYTPDY 
REMARK    
REMARK t0070.pep                146 GGFNAGFGYAFDEKQTIGTAD...SVGRYIGGYVAYDNGPLSASLGLAQ. 
REMARK 1pho.seq                 146 FGVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYT 
REMARK   Consensus              151 GGFQFGFGYAFDDKQTFGTAD...SVGRYYGGYVAYEFGPLKLALGYAQA 
REMARK    
REMARK t0070.pep                192 ........QKTAVGGLATDRDEITLGASYNFGVAKLSGLLQQTKFK.... 
REMARK 1pho.seq                 196 N.SDRTNEQNLQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPIT 
REMARK   Consensus              201 DLGDGTDTQKTAVGGLQGRRREYGLGAGYDFGPAKLGGLWQQTRFKD... 
REMARK    
REMARK t0070.pep                230 ....RDIGGDIKTNSYMLGASAPVGGVGEVKLQYALYDQK.....AIDSK 
REMARK 1pho.seq                 245 XXXXXXGGFANKTQNFEAVAQYQFDFGLRPSLGYVLSKGKDIEGIGDEDL 
REMARK   Consensus              251 ...QRDVGGDLRTDNYMLGAKYPLGPVLGLKLQYTYYDQK...VDDVDSH 
REMARK    
REMARK t0070.pep                271 AHQITLGYVHNLSKRTALYGNLAFLKNKDASTLGLQAKGVYAGGVQAGES 
REMARK 1pho.seq                 295 VNYIDVGATYYFNKNMSAFVDYKINQLDSDNKLNINNDDI.......... 
REMARK   Consensus              301 WHQFGLGYVYDLSKRTDLYGQLVYLKQRGAKGLGLQGKGIYDGGVQTGES 
REMARK    
REMARK t0070.pep                321 ....QTGVQVGIRHAF 
REMARK 1pho.seq                 335 ................ 
REMARK   Consensus              351 SSIDQTGVQVGLRHRF 
REMARK    
REMARK   Consensus              401  
REMARK    
MODEL 1  
PARENT 1pho 
Q   1    G   8     
S   2    N   9     
S   3    K  10     
V   4    L  11     
T   5    D  12     
L   6    V  13     
F   7    Y  14     
G   8    G  15     
I   9    K  16     
V  10    V  17     
D  11    K  18     
T  12    A  19     
V  14    M  20     
A  15    H  21     
Y  16    Y  22     
V  17    M  23     
N  18    S  24     
A  21    D  25     
A  22    N  26     
G  28    A  32     
L  29    S  33     
G  30    K  34     
T  31    D  35     
S  32    G  36     
G  33    D  37     
A  34    Q  38     
S  35    S  39     
T  36    Y  40     
S  37    I  41     
R  38    R  42     
L  39    F  43     
G  40    G  44     
L  41    F  45     
R  42    K  46     
G  43    G  47     
T  44    E  48     
E  45    T  49     
D  46    Q  50     
L  47    I  51     
G  48    N  52     
G  49    D  53     
G  50    Q  54     
L  51    L  55     
K  52    T  56     
A  53    G  57     
G  54    Y  58     
F  55    G  59     
W  56    R  60     
L  57    W  61     
E  58    E  62     
G  59    A  63     
E  60    E  64     
I  61    F  65     
F  62    A  66     
G  63    G  67     
D  64    N  68     
D  65    K  69     
G  66    A  70     
N  67    E  71     
A  68    S  72     
S  69    D  73     
G  70    A  77     
F  71    Q  78     
N  72    Q  79     
F  73    K  80     
K  74    T  81     
R  75    R  82     
R  76    L  83     
S  77    A  84     
T  78    F  85     
V  79    A  86     
S  80    G  87     
L  81    L  88     
S  82    K  89     
G  83    K  91     
N  84    D  92     
F  85    L  93     
G  86    G  94     
E  87    S  95     
V  88    F  96     
R  89    D  97     
L  90    Y  98     
G  91    G  99     
R  92    R 100     
D  93    N 101     
L  94    L 102     
V  95    G 103     
P  96    A 104     
T  97    L 105     
S  98    Y 106     
Q  99    D 107     
K 100    V 108     
L 101    E 109     
T 102    A 110     
S 103    W 111     
Y 104    T 112     
D 105    D 113     
L 106    M 114     
F 107    F 115     
S 108    P 116     
A 109    E 117     
T 110    F 118     
G 111    G 119     
G 113    G 120     
P 114    D 121     
F 115    S 121A     
G 124    S 122     
Q 125    A 123 
G 126    Q 124 
A 127    T 125 
D 128    D 126 
D 129    N 127 
N 130    M 129 
G 131    T 130 
I 132    K 131 
R 133    R 132 
A 134    A 133 
N 135    S 134 
N 136    G 135 
L 137    L 136 
I 138    A 137 
S 139    T 138 
Y 140    Y 139 
Y 141    R 140 
T 142    N 141 
P 143    T 142 
N 144    D 143 
F 145    F 144 
G 146    F 145 
G 147    G 146 
F 148    V 147 
N 149    I 148 
A 150    D 149 
G 151    G 150 
F 152    L 151 
G 153    N 152 
Y 154    L 153 
A 155    T 154 
F 156    L 155 
D 157    Q 156 
E 158    Y 157 
K 159    Q 158 
Q 160    G 159 
T 161    K 160 
I 162    N 161 
G 163    E 162 
T 164    N 163 
A 165    R 164 
D 166    D 165 
S 167    Q 169 
V 168    N 170 
G 169    G 171 
R 170    D 172 
Y 171    G 173 
I 172    F 174 
G 173    G 175 
G 174    T 176 
Y 175    S 177 
V 176    L 178 
A 177    T 179 
Y 178    Y 180 
D 179    D 181 
N 180    F 182 
G 181    G 183 
P 182    G 183A 
L 183    S 183B 
S 184    D 184 
A 185    F 185 
S 186    A 186 
L 187    I 187 
G 188    S 188 
L 189    G 189 
A 190    A 190 
Q 191    Y 191 
Q 192    Q 200 
K 193    N 201 
T 194    L 202 
A 195    Q 203 
V 196    S 204 
G 197    R 205 
G 198    G 206 
L 199    T 207 
A 200    G 208 
T 201    K 209 
D 202    R 210 
R 203    A 211 
D 204    E 212 
E 205    A 213 
I 206    W 214 
T 207    A 215 
L 208    T 216 
G 209    G 217 
A 210    L 218 
S 211    K 219 
Y 212    Y 220 
N 213    D 221 
F 214    A 222 
G 215    N 223 
V 216    N 224 
A 217    I 225 
K 218    Y 226 
L 219    L 227 
S 220    A 228 
G 221    T 229 
L 222    F 230 
L 223    Y 231 
Q 224    S 232 
Q 225    E 233 
T 226    T 234 
K 227    R 235 
F 228    K 236 
K 229    M 237 
I 232    G 248 
G 233    G 249 
G 234    F 250 
D 235    A 251 
I 236    N 252 
K 237    K 253 
T 238    T 254 
N 239    Q 255 
S 240    N 256 
Y 241    F 257 
M 242    E 258 
L 243    A 259 
G 244    V 260 
A 245    A 261 
S 246    Q 262 
A 247    Y 263 
P 248    Q 264 
V 249    F 265 
G 250    D 266 
G 251    F 267 
V 252    G 268 
G 253    L 269 
E 254    R 270 
V 255    P 271 
K 256    S 272 
L 257    L 273 
Q 258    G 274 
Y 259    Y 275 
A 260    V 276 
L 261    L 277 
Y 262    S 278 
D 263    K 279 
Q 264    G 280 
K 265    K 281 
A 266    G 287 
I 267    D 288 
D 268    E 289 
S 269    D 290 
K 270    L 291 
A 271    V 292 
H 272    N 293 
Q 273    Y 294 
I 274    I 295 
T 275    D 296 
L 276    V 297 
G 277    G 298 
Y 278    A 299 
V 279    T 300 
H 280    Y 301 
N 281    Y 302 
L 282    F 303 
S 283    N 304 
K 284    K 305 
R 285    N 306 
T 286    M 307 
A 287    S 308 
L 288    A 309 
Y 289    F 310 
G 290    V 311 
N 291    D 312 
L 292    Y 313 
A 293    K 314 
F 294    I 315 
L 295    N 316 
K 296    Q 317 
N 297    L 318 
K 298    D 319 
D 299    S 320 
A 300    D 321 
S 301    N 322 
T 302    K 323 
L 303    L 324 
G 304    N 325 
L 305    I 326 
Q 306    N 327 
A 307    N 328 
K 308    D 329 
G 309    D 330 
V 310    I 331 
TER 
END 
