PFRMAT AL 
TARGET T0058 
AUTHOR 5827-4749-3439 
METHOD Threading alignment for T0058 
METHOD 
METHOD Note: this alignment was obtained automatically, and has not been 
METHOD hand-edited. 
METHOD 
METHOD This alignment was created by aligning the target sequence to a 
METHOD library of 3D-1D type threading models.  Matching and gap scores 
METHOD were optimized for discriminating remote homolog sequence-structure 
METHOD alignments from alignments on incorrect folds. 
METHOD 
METHOD This alignment scored significantly higher than any other structure 
METHOD matches. 
METHOD 
MODEL 2 
PARENT 1udg 
M    1    F    22 
A    2    R    23 
N    3    R    24 
E    4    V    25 
L    5    F    26 
T    6    L    27 
W    7    I    28 
H    8    D    29 
D    9    D    30 
V    10    A    31 
L    11    L    35 
A    12    M    36 
E    13    E    37 
E    14    P    38 
K    15    E    39 
Q    16    L    40 
Q    17    A    41 
P    18    N    42 
Y    19    P    43 
F    20    L    44 
L    21    T    45 
N    22    A    46 
T    23    H    47 
L    24    L    48 
Q    25    L    49 
T    26    A    50 
V    27    E    51 
A    28    Y    52 
S    29    N    53 
E    30    R    54 
R    31    R    55 
Q    32    C    56 
S    33    Q    57 
G    34    T    58 
V    35    E    59 
T    36    E    60 
I    37    V    61 
Y    38    L    62 
P    39    P    63 
P    40    P    64 
Q    41    R    65 
K    42    E    66 
D    43    D    67 
V    44    V    68 
F    45    F    69 
N    46    S    70 
A    47    W    71 
F    48    T    72 
R    49    R    73 
F    50    Y    74 
T    51    C    75 
E    52    T    76 
L    53    P    77 
G    54    D    78 
D    55    E    79 
V    56    V    80 
K    57    R    81 
V    58    V    82 
V    59    V    83 
I    60    I    84 
L    61    I    85 
G    62    G    86 
Q    63    Q    87 
D    64    D    88 
P    65    P    89 
Y    66    Y    90 
H    67    H    91 
G    68    H    92 
P    69    P    93 
G    70    G    94 
Q    71    Q    95 
A    72    A    96 
H    73    H    97 
G    74    G    98 
L    75    L    99 
A    76    A    100 
F    77    F    101 
S    78    S    102 
V    79    V    103 
R    80    R    104 
P    81    A    105 
G    82    N    106 
I    83    V    107 
A    84    P    108 
I    85    P    109 
P    86    P    110 
P    87    P    111 
S    88    S    112 
L    89    L    113 
L    90    R    114 
N    91    N    115 
M    92    V    116 
Y    93    L    117 
K    94    A    118 
E    95    A    119 
L    96    V    120 
E    97    K    121 
N    98    N    122 
T    99    C    123 
I    100    Y    124 
P    101    P    125 
G    102    E    126 
F    103    A    127 
T    104    R    128 
R    105    M    129 
P    106    S    130 
N    107    G    131 
H    108    H    132 
G    109    G    133 
Y    110    C    134 
L    111    L    135 
E    112    E    136 
S    113    K    137 
W    114    W    138 
A    115    A    139 
R    116    R    140 
Q    117    D    141 
G    118    G    142 
V    119    V    143 
L    120    L    144 
L    121    L    145 
L    122    L    146 
N    123    N    147 
T    124    T    148 
V    125    T    149 
L    126    L    150 
T    127    T    151 
V    128    V    152 
R    129    K    153 
A    130    R    154 
G    131    G    155 
Q    132    A    156 
A    133    A    157 
H    134    A    158 
S    135    S    159 
H    136    H    160 
A    137    S    161 
S    138    R    162 
L    139    I    163 
G    140    G    164 
W    141    W    165 
E    142    D    166 
T    143    R    167 
F    144    F    168 
T    145    V    169 
D    146    G    170 
K    147    G    171 
V    148    V    172 
I    149    I    173 
S    150    R    174 
L    151    R    175 
I    152    L    176 
N    153    A    177 
Q    154    A    178 
H    155    R    179 
R    156    R    180 
E    157    P    181 
G    158    G    182 
V    159    L    183 
V    160    V    184 
F    161    F    185 
L    162    M    186 
L    163    L    187 
W    164    W    188 
G    165    G    189 
S    166    T    190 
H    167    H    191 
A    168    A    192 
Q    169    Q    193 
K    170    N    194 
K    171    A    195 
G    172    I    196 
A    173    R    197 
I    174    P    198 
D    176    D    199 
K    177    P    200 
Q    178    R    201 
R    179    V    202 
H    180    H    203 
H    181    C    204 
V    182    V    205 
L    183    L    206 
K    184    K    207 
A    185    F    208 
P    186    S    209 
H    187    H    210 
P    188    P    211 
S    189    S    212 
P    190    P    213 
S    192    L    214 
A    193    S    215 
H    194    K    216 
R    195    V    217 
G    196    P    218 
F    197    F    219 
F    198    G    220 
G    199    T    221 
C    200    C    222 
N    201    Q    223 
H    202    H    224 
F    203    F    225 
V    204    L    226 
L    205    V    227 
A    206    A    228 
N    207    N    229 
Q    208    R    230 
W    209    Y    231 
L    210    L    232 
E    211    E    233 
Q    212    T    234 
R    213    R    235 
G    214    S    236 
E    215    I    237 
T    216    S    238 
P    217    P    239 
I    218    I    240 
D    219    D    241 
W    220    W    242 
M    221    S    243 
P    222    V    244 
TER 
END 
