PFRMAT AL 
TARGET T0056 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 3 
PARENT 1pbx_B 
E 31    D 5     
A 32    K 6     
E 33    E 7     
Q 34    R 8     
S 35    S 9     
V 36    I 10    
L 37    I 11    
G 38    S 12    
G 39    D 13    
L 40    I 14    
REMARK REF GAP 1 
L 42    F 15    
D 43    S 16    
N 44    H 17    
E 45    M 18    
R 46    D 19    
W 47    Y 20    
D 48    D 21    
D 49    D 22    
V 50    I 23    
A 51    G 24    
E 52    P 25    
R 53    K 26    
V 54    A 27    
V 55    L 28    
A 56    S 29    
D 57    R 30    
D 58    C 31    
F 59    L 32    
REMARK TAR GAP 2 
Y 60    Y 35    
T 61    P 36    
R 62    W 37    
P 63    T 38    
H 64    Q 39    
R 65    R 40    
H 66    H 41    
REMARK REF GAP 1 
F 68    F 42    
T 69    S 43    
E 70    G 44    
M 71    F 45    
A 72    G 46    
R 73    N 47    
L 74    L 48    
Q 75    Y 49    
E 76    N 50    
S 77    A 51    
G 78    E 52    
S 79    A 53    
P 80    I 54    
I 81    I 55    
D 82    G 56    
L 83    N 57    
I 84    A 58    
T 85    N 59    
L 86    V 60    
A 87    A 61    
E 88    A 62    
S 89    H 63    
REMARK REF GAP 11 
G 101   G 64    
F 102   I 65    
A 103   K 66    
Y 104   V 67    
L 105   L 68    
A 106   H 69    
E 107   G 70    
L 108   L 71    
S 109   D 72    
K 110   R 73    
N 111   G 74    
T 112   V 75    
P 113   K 76    
S 114   N 77    
A 115   M 78    
A 116   D 79    
N 117   N 80    
I 118   I 81    
S 119   A 82    
A 120   A 83    
REMARK TAR GAP 1 
Y 121   Y 85    
A 122   A 86    
D 123   D 87    
I 124   L 88    
V 125   S 89    
R 126   T 90    
E 127   L 91    
R 128   H 92    
A 129   S 93    
TER 
END 
