PFRMAT AL 
TARGET T0056 
AUTHOR 5827-4749-3439 
METHOD HMM prediction, automatic alignment of target and structure sequences 
METHOD to the HMM for 1ycrA and homologs. 
MODEL 1 
PARENT 1ycr_A 
E    33    E    25 
Q    34    T    26 
S    35    L    27 
V    36    V    28 
L    37    R    29 
G    38    P    30 
G    39    K    31 
L    40    P    32 
M    41    L    33 
L    42    L    34 
D    48    L    35 
D    49    K    36 
V    50    L    37 
A    51    L    38 
E    52    K    39 
R    53    S    40 
V    54    V    41 
V    55    G    42 
A    56    A    43 
D    57    Q    44 
D    58    D    46 
F    59    T    47 
Y    60    Y    48 
T    61    T    49 
R    62    K    51 
P    63    E    52 
H    64    V    53 
R    65    L    54 
H    66    F    55 
I    67    Y    56 
F    68    L    57 
T    69    G    58 
E    70    Q    59 
M    71    Y    60 
A    72    I    61 
R    73    M    62 
L    74    T    63 
Q    75    K    64 
E    76    R    65 
S    77    L    66 
G    78    Y    67 
S    79    D    68 
P    80    E    69 
I    81    K    70 
D    82    Q    71 
L    83    Q    72 
I    84    H    73 
T    85    I    74 
L    86    V    75 
A    87    Y    76 
E    88    C    77 
S    89    S    78 
L    90    N    79 
E    91    D    80 
R    92    L    81 
Q    93    L    82 
G    94    G    83 
Q    95    D    84 
L    96    L    85 
D    97    F    86 
S    98    G    87 
V    99    V    88 
G    100    P    89 
G    101    S    90 
F    102    F    91 
A    103    S    92 
Y    104    V    93 
L    105    K    94 
A    106    E    95 
E    107    H    96 
L    108    R    97 
S    109    K    98 
K    110    I    99 
N    111    Y    100 
T    112    T    101 
P    113    M    102 
S    114    I    103 
A    115    Y    104 
A    116    R    105 
N    117    N    106 
I    118    L    107 
S    119    V    108 
A    120    V    109 
TER 
END 
