PFRMAT AL 
TARGET T0053 
AUTHOR 7169-6295-1599 
METHOD T053 sequence was threaded on the structural library composed of PDB rel. 
METHOD 83 using several threaders developed by us. 1ak1 structure showed  
METHOD significant score by one method and it showed relatively good  
METHOD position in others also.  The functional similarity  of the target  
METHOD and 1ak1 (both of them are involved in the HEM or B12 synthesis)  
METHOD supports our results. 
MODEL 1 
PARENT 1ak1 
M 1 I 22 
K 2 E 23 
K 3 R 24 
A 4 Y 25 
L 5 Y 26 
L 6 T 27 
V 7 H 28 
V 8 I 29 
S 9 R 30 
F 10 R 31 
G 11 G 32 
T 12 R 33 
S 13 K 34 
Y 14 P 35 
H 15 E 36 
D 16 P 37 
T 17 E 38 
C 18 M 39 
E 19 L 40 
K 20 Q 41 
N 21 D 42 
I 22 L 43 
V 23 K 44 
A 24 D 45 
C 25 R 46 
E 26 Y 47 
R 27 E 48 
D 28 A 49 
L 29 I 50 
A 30 G 51 
A 31 G 52 
S 32 I 53 
C 33 S 54 
P 34 P 55 
D 35 L 56 
R 36 A 57 
D 37 Q 58 
L 38 I 59 
F 39 T 60 
R 40 E 61 
A 41 Q 62 
F 42 Q 63 
T 43 A 64 
S 44 H 65 
G 45 N 66 
M 46 L 67 
I 47 H 70 
I 48 L 71 
R 49 N 72 
K 50 E 73 
L 51 I 74 
R 52 Q 75 
Q 53 D 76 
R 54 I 78 
D 55 T 79 
G 56 F 80 
I 57 K 81 
D 58 A 82 
I 59 Y 83 
D 60 E 90 
T 61 P 91 
P 62 F 92 
L 63 I 93 
Q 64 D 95 
A 65 A 96 
L 66 V 97 
Q 67 A 98 
K 68 E 99 
L 69 M 100 
A 70 H 101 
A 71 K 102 
Q 72 D 103 
G 73 G 104 
Y 74 I 105 
Q 75 T 106 
D 76 E 107 
V 77 A 108 
A 78 V 109 
I 79 S 110 
Q 80 I 111 
S 81 V 112 
L 82 L 113 
H 83 A 114 
I 84 P 115 
I 85 H 116 
N 86 F 117 
G 87 S 118 
D 88 T 119 
E 89 F 120 
Y 90 S 121 
E 91 Q 123 
K 92 S 124 
I 93 Y 125 
V 94 N 126 
R 95 K 127 
E 96 R 128 
V 97 A 129 
Q 98 K 130 
L 99 E 131 
L 100 E 132 
R 101 A 133 
P 102 E 134 
L 103 K 135 
F 104 L 136 
T 105 G 137 
R 106 G 138 
L 107 L 139 
T 108 T 140 
L 109 I 141 
G 110 T 142 
V 111 S 143 
P 112 V 144 
L 113 E 145 
L 114 S 146 
S 115 Y 148 
S 116 D 149 
H 117 E 150 
N 118 P 151 
D 119 K 152 
Y 120 F 153 
V 121 V 154 
Q 122 T 155 
L 123 Y 156 
M 124 W 157 
Q 125 D 159 
A 126 R 160 
L 127 V 161 
R 128 K 162 
Q 129 E 163 
Q 130 T 164 
M 131 Y 165 
P 132 M 168 
S 133 P 169 
L 134 E 170 
R 135 D 171 
Q 136 E 172 
T 137 R 173 
E 138 E 174 
K 139 N 175 
V 140 I 179 
V 141 V 180 
F 142 S 181 
M 143 A 182 
G 144 E 191 
H 145 F 192 
G 146 G 193 
A 147 D 194 
S 148 P 195 
H 149 Y 196 
H 150 P 197 
A 151 Q 199 
F 152 L 200 
A 153 H 201 
A 154 E 202 
Y 155 S 203 
A 156 A 204 
C 157 L 206 
L 158 I 207 
D 159 E 209 
H 160 G 210 
M 161 A 211 
M 162 G 212 
T 163 V 213 
A 164 S 214 
Q 165 E 215 
R 166 Y 216 
F 167 A 217 
P 168 V 218 
A 169 G 219 
R 170 W 220 
V 171 Q 221 
G 172 S 222 
A 173 E 223 
V 174 G 224 
E 175 N 225 
S 176 W 230 
Y 177 L 231 
P 178 G 232 
E 179 D 234 
V 180 V 235 
D 181 Q 236 
I 182 D 237 
L 183 L 238 
I 184 T 239 
D 185 R 240 
S 186 D 241 
L 187 L 242 
R 188 E 244 
D 189 Q 245 
E 190 K 246 
G 191 G 247 
V 192 Y 248 
T 193 Q 249 
G 194 A 250 
V 195 F 251 
H 196 V 252 
L 197 Y 253 
M 198 V 254 
P 199 P 255 
L 200 V 256 
M 201 G 257 
L 202 F 258 
V 203 V 259 
A 204 A 260 
G 205 D 261 
D 206 H 262 
H 207 L 263 
A 208 E 264 
I 209 V 265 
N 210 L 266 
D 211 Y 267 
M 212 D 268 
A 213 N 269 
G 217 D 270 
D 218 Y 271 
S 219 E 272 
W 220 C 273 
K 221 K 274 
M 222 V 275 
R 223 V 276 
F 224 T 277 
N 225 D 278 
A 226 D 279 
A 227 I 280 
G 228 G 281 
I 229 A 282 
P 230 S 283 
A 231 Y 284 
T 232 Y 285 
W 234 R 286 
L 235 P 287 
S 236 E 288 
G 237 M 289 
L 238 P 290 
G 239 N 291 
E 240 A 292 
N 241 K 293 
P 242 P 294 
A 243 E 295 
I 244 F 296 
R 245 I 297 
A 246 D 298 
M 247 A 299 
F 248 L 300 
V 249 A 301 
A 250 T 302 
H 251 V 303 
L 252 V 304 
H 253 L 305 
Q 254 K 306 
A 255 K 307 
L 256 L 308 
N 257 G 309 
M 258 R 310 
TER 
END 
