PFRMAT AL 
TARGET T0053 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 4 
PARENT 1gta 
I 84    M 81    
I 85    L 82    
N 86    G 83    
G 87    G 84    
D 88    C 85    
E 89    P 86    
Y 90    K 87    
E 91    E 88    
K 92    R 89    
REMARK REF GAP 2 
R 95    A 90    
E 96    E 91    
V 97    I 92    
Q 98    S 93    
L 99    M 94    
L 100   L 95    
R 101   E 96    
P 102   G 97    
L 103   A 98    
F 104   V 99    
T 105   L 100   
R 106   D 101   
L 107   I 102   
T 108   R 103   
L 109   Y 104   
G 110   G 105   
V 111   V 106   
P 112   S 107   
L 113   R 108   
L 114   I 109   
S 115   A 110   
S 116   Y 111   
H 117   S 112   
N 118   K 113   
D 119   D 114   
Y 120   F 115   
V 121   E 116   
Q 122   T 117   
L 123   L 118   
M 124   K 119   
Q 125   V 120   
A 126   D 121   
L 127   F 122   
R 128   L 123   
Q 129   S 124   
Q 130   K 125   
M 131   L 126   
P 132   P 127   
S 133   E 128   
L 134   M 129   
REMARK TAR GAP 6 
R 135   R 136   
Q 136   L 137   
T 137   C 138   
E 138   H 139   
K 139   K 140   
V 140   T 141   
V 141   Y 142   
F 142   L 143   
M 143   N 144   
G 144   G 145   
H 145   D 146   
G 146   H 147   
A 147   V 148   
S 148   T 149   
H 149   H 150   
H 150   P 151   
A 151   D 152   
F 152   F 153   
A 153   M 154   
A 154   L 155   
Y 155   Y 156   
A 156   D 157   
C 157   A 158   
L 158   L 159   
D 159   D 160   
H 160   V 161   
M 161   V 162   
REMARK TAR GAP 5 
M 162   M 168   
T 163   C 169   
A 164   L 170   
Q 165   D 171   
R 166   A 172   
F 167   F 173   
P 168   P 174   
A 169   K 175   
R 170   L 176   
V 171   V 177   
REMARK TAR GAP 3 
G 172   K 181   
A 173   R 182   
V 174   I 183   
E 175   E 184   
S 176   A 185   
Y 177   I 186   
P 178   P 187   
E 179   Q 188   
V 180   I 189   
D 181   D 190   
I 182   K 191   
L 183   Y 192   
I 184   L 193   
D 185   K 194   
S 186   S 195   
L 187   S 196   
R 188   K 197   
D 189   Y 198   
E 190   I 199   
G 191   A 200   
REMARK REF GAP 6 
M 198   W 201   
P 199   P 202   
L 200   L 203   
REMARK REF GAP 17 
D 218   Q 204   
S 219   G 205   
W 220   W 206   
K 221   Q 207   
M 222   A 208   
R 223   T 209   
F 224   F 210   
N 225   G 211   
A 226   G 212   
A 227   G 213   
G 228   D 214   
I 229   H 215   
P 230   P 216   
A 231   P 217   
T 232   K 218   
TER 
END 
