PFRMAT AL 
TARGET T0046 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 2 
PARENT 1rho_C 
S 3     D 93    
I 4     L 94    
T 5     E 95    
A 6     S 96    
Y 7     F 97    
S 8     K 98    
K 9     K 99    
N 10    Q 100   
G 11    S 101   
L 12    F 102   
REMARK TAR GAP 8 
K 13    R 111   
I 14    I 112   
E 15    K 113   
F 16    I 114   
T 17    S 115   
F 18    F 116   
E 19    R 117   
R 20    V 118   
S 21    N 119   
N 22    R 120   
T 23    E 121   
N 24    I 122   
P 25    V 123   
S 26    S 124   
V 27    G 125   
T 28    K 127   
V 29    Y 128   
I 30    I 129   
T 31    E 130   
I 32    H 131   
Q 33    T 132   
A 34    Y 133   
S 35    R 134   
N 36    K 135   
S 37    G 136   
T 38    V 137   
E 39    K 138   
L 40    I 139   
D 41    D 140   
M 42    K 141   
T 43    T 142   
D 44    D 143   
F 45    Y 144   
V 46    V 146   
REMARK REF GAP 1 
Q 48    G 147   
A 49    S 148   
A 50    Y 149   
V 51    G 150   
P 52    P 151   
K 53    R 152   
T 54    A 153   
F 55    E 154   
Q 56    E 155   
L 57    Y 156   
Q 58    E 157   
L 59    F 158   
L 60    L 159   
S 61    T 160   
P 62    P 161   
S 63    V 162   
S 64    E 163   
S 65    E 164   
V 66    A 165   
V 67    P 166   
P 68    K 167   
A 69    G 168   
F 70    L 170   
N 71    A 171   
T 72    R 172   
G 73    G 173   
T 74    S 174   
I 75    Y 175   
T 76    S 176   
Q 77    I 177   
V 78    K 178   
I 79    S 179   
K 80    R 180   
V 81    F 181   
L 82    T 182   
N 83    D 183   
P 84    D 184   
Q 85    D 185   
K 86    K 186   
REMARK TAR GAP 1 
Q 87    D 188   
Q 88    H 189   
L 89    L 190   
R 90    S 191   
M 91    W 192   
R 92    E 193   
I 93    W 194   
K 94    N 195   
L 95    L 196   
T 96    T 197   
Y 97    I 198   
N 98    K 199   
H 99    K 200   
K 100   D 201   
TER 
END 
