PFRMAT AL 
TARGET T0044 
AUTHOR 7169-6295-1599 
METHOD We paid attention on the submitter's remark, saying the secondary structure 
METHOD predition was quite accurate. Therefore we believed the structure of T0044 
METHOD was irregular alpha/beta type. Furthermore we took into account the 
METHOD functional similarity: ATP-binding might be required to the parent 
METHOD structure. The target sequence, its apparently homologues sequences and 
METHOD their alignment were threaded on the structural library composed from PDB 
METHOD rel.83. The structure of 3hsc ranked at the top position in a trial of the 
METHOD forward folding search. Although its score was not significant level, it 
METHOD meets the conditions described above. 
MODEL 3 
PARENT 3HSC 
M 1 Y 15 
V 2 S 16 
K 3 C 17 
R 4 V 18 
M 5 G 19 
I 6 V 20 
A 7 F 21 
L 8 Q 22 
D 9 H 23 
G 10 G 24 
A 11 K 25 
Q 12 V 26 
G 13 E 27 
E 14 I 28 
G 15 I 29 
G 16 A 30 
G 17 N 31 
Q 18 D 32 
I 19 Q 33 
L 20 G 34 
R 21 N 35 
S 22 R 36 
A 23 T 37 
L 24 T 38 
S 25 P 39 
L 26 S 40 
S 27 Y 41 
M 28 V 42 
I 29 A 43 
T 30 F 44 
G 31 T 45 
Q 32 D 46 
P 33 T 47 
T 35 E 48 
I 36 R 49 
T 37 L 50 
S 38 I 51 
I 39 G 52 
A 41 D 53 
G 42 A 54 
R 43 A 55 
A 44 K 56 
K 45 N 57 
P 46 Q 58 
L 48 V 59 
L 49 A 60 
R 50 M 61 
Q 51 N 62 
H 52 P 63 
L 53 T 64 
T 54 N 65 
A 55 T 66 
V 56 V 67 
K 57 F 68 
A 58 D 69 
A 59 A 70 
T 60 K 71 
E 61 R 72 
I 62 L 73 
C 63 I 74 
G 64 G 75 
A 65 R 76 
T 66 R 77 
V 67 F 78 
E 68 D 79 
G 69 D 80 
A 70 A 81 
E 71 V 82 
L 72 V 83 
G 73 Q 84 
S 74 S 85 
Q 75 D 86 
R 76 M 87 
L 77 K 88 
L 78 H 89 
F 79 W 90 
R 80 P 91 
P 81 F 92 
G 82 M 93 
T 83 V 94 
V 84 V 95 
R 85 N 96 
G 86 A 98 
G 87 G 99 
D 88 R 100 
Y 89 P 101 
R 90 K 102 
F 91 V 103 
A 92 Q 104 
I 93 V 105 
G 94 G 109 
S 95 E 110 
A 96 T 111 
G 97 K 112 
S 98 S 113 
C 99 F 114 
T 100 Y 115 
L 101 E 118 
V 102 V 119 
L 103 S 120 
Q 104 S 121 
T 105 M 122 
V 106 V 123 
L 107 L 124 
P 108 T 125 
A 109 K 126 
L 110 M 127 
W 111 I 130 
F 112 A 131 
A 113 E 132 
D 114 A 133 
G 115 G 136 
P 116 K 137 
S 117 T 138 
R 118 N 141 
V 119 A 142 
E 120 V 143 
V 121 V 144 
S 122 T 145 
G 123 V 146 
G 124 P 147 
T 125 A 148 
D 126 Y 149 
N 127 F 150 
P 128 N 151 
S 129 D 152 
A 130 S 153 
P 131 Q 154 
P 132 R 155 
A 133 Q 156 
D 134 A 157 
F 135 T 158 
I 136 K 159 
R 137 D 160 
R 138 A 161 
V 139 G 162 
L 140 T 163 
E 141 I 164 
P 142 A 165 
L 143 L 167 
L 144 N 168 
A 145 V 169 
K 146 L 170 
I 147 R 171 
G 148 I 172 
I 149 I 173 
H 150 N 174 
Q 151 E 175 
Q 152 P 176 
T 153 T 177 
T 154 A 178 
L 155 A 179 
L 156 A 180 
R 157 I 181 
H 158 Y 183 
G 159 G 184 
F 160 L 185 
Y 161 D 186 
P 162 K 188 
A 163 V 189 
G 164 G 190 
G 165 A 191 
G 166 E 192 
V 167 R 193 
V 168 N 194 
A 169 V 195 
T 170 L 196 
E 171 I 197 
V 172 F 198 
S 173 L 200 
P 174 G 201 
V 175 G 202 
A 176 G 203 
S 177 T 204 
F 178 F 205 
N 179 D 206 
T 180 V 207 
L 181 S 208 
Q 182 I 209 
L 183 L 210 
G 184 T 211 
E 185 I 212 
R 186 E 213 
G 187 D 214 
N 188 G 215 
I 189 I 216 
V 190 F 217 
Q 191 E 218 
M 192 V 219 
V 196 K 220 
L 197 S 221 
L 198 T 222 
A 199 A 223 
G 200 G 224 
V 201 D 225 
P 202 T 226 
R 203 H 227 
H 204 L 228 
V 205 G 229 
A 206 G 230 
E 207 E 231 
R 208 D 232 
E 209 F 233 
I 210 D 234 
A 211 N 235 
T 212 R 236 
L 213 M 237 
A 214 V 238 
G 215 N 239 
S 216 H 240 
F 217 F 241 
S 218 I 242 
L 219 A 243 
H 220 E 244 
E 221 F 245 
Q 222 K 246 
N 223 R 247 
I 224 K 248 
H 225 H 249 
N 226 K 250 
L 227 K 251 
P 228 D 252 
R 229 I 253 
D 230 S 254 
Q 231 E 255 
G 232 N 256 
P 233 K 257 
G 234 R 258 
N 235 A 259 
T 236 V 260 
V 237 R 261 
S 238 R 262 
L 239 L 263 
E 240 R 264 
V 241 T 265 
E 242 A 266 
S 243 C 267 
E 244 E 268 
N 245 R 269 
I 246 A 270 
T 247 K 271 
E 248 R 272 
R 249 T 273 
F 250 L 274 
F 251 S 275 
G 254 S 276 
E 255 S 277 
K 256 T 278 
R 257 Q 279 
V 258 A 280 
S 259 S 281 
A 260 I 282 
E 261 E 283 
V 262 I 284 
A 265 D 285 
Q 266 S 286 
L 267 L 287 
V 268 Y 288 
K 269 E 289 
E 270 G 290 
V 271 I 291 
K 272 D 292 
R 273 F 293 
Y 274 T 295 
L 275 S 296 
A 276 I 297 
S 277 T 298 
T 278 R 299 
A 279 A 300 
A 280 R 301 
V 281 F 302 
G 282 E 303 
E 283 E 304 
Y 284 L 305 
L 285 N 306 
A 286 A 307 
D 287 D 308 
Q 288 L 309 
L 289 F 310 
V 290 R 311 
L 291 T 313 
P 292 L 314 
M 293 D 315 
A 294 P 316 
L 295 V 317 
A 296 E 318 
G 297 K 319 
A 298 A 320 
G 299 R 322 
E 300 D 323 
F 301 A 324 
T 302 K 325 
V 303 L 326 
A 304 D 327 
H 305 K 328 
P 306 S 329 
S 307 Q 330 
C 308 I 331 
H 309 H 332 
L 310 D 333 
L 311 I 334 
T 312 V 335 
N 313 L 336 
I 314 V 337 
A 315 G 338 
V 316 G 339 
V 317 S 340 
E 318 T 341 
R 319 R 342 
F 320 I 343 
L 321 P 344 
P 322 K 345 
V 323 I 346 
R 324 Q 347 
F 325 K 348 
S 326 L 349 
L 327 L 350 
I 328 Q 351 
E 329 D 352 
T 330 F 353 
D 331 F 354 
G 332 N 355 
V 333 G 356 
T 334 K 357 
R 335 E 358 
V 336 L 359 
S 337 N 360 
I 338 K 361 
E 339 S 362 
G 340 I 363 
S 341 N 364 
H 342 P 365 
H 343 D 366 
H 344 E 367 
H 345 A 368 
H 346 V 369 
H 347 A 370 
TER 
END  
