PFRMAT AL 
TARGET T0043 
AUTHOR 7169-6295-1599 
METHOD The target sequence and its apparent homologs as well as their 
METHOD multiple sequence alignment, were threaded through the structures in 
METHOD a library constructed from PDB rel.83. 
METHOD We examined the target with various threading methodologies that  
METHOD we have developed.  
METHOD The structure of fructose permease always ranked at relatively  
METHOD high positions. Its fold is a doubly wounded a/b type structure  
METHOD with a parallel beta-sheet, but topologicaly different from cutinase.  
METHOD E.C. No. of T0043 is more similar to that of fructose permease than  
METHOD cutinase, suggesting their possible similarity of functions. 
MODEL 2 
PARENT 1BLE 
T 1 I 4 
V 2 V 5 
A 3 L 6 
Y 4 A 7 
I 5 R 8 
A 6 I 9 
I 7 D 10 
G 8 D 11 
S 9 R 12 
N 10 F 13 
L 11 I 14 
A 12 H 15 
S 13 G 16 
P 14 Q 17 
Q 17 I 18 
V 18 L 19 
N 19 T 20 
A 20 R 21 
A 21 W 22 
L 22 I 23 
K 23 K 24 
A 24 V 25 
L 25 H 26 
G 26 A 27 
I 28 A 28 
P 29 D 29 
E 30 R 30 
S 31 I 31 
H 32 I 32 
I 33 V 33 
L 34 V 34 
T 35 S 35 
V 36 D 36 
S 37 D 37 
S 38 I 38 
F 39 A 39 
Y 40 Q 40 
R 41 R 44 
T 42 K 45 
P 43 T 46 
P 44 L 47 
L 45 I 48 
G 46 L 49 
P 47 S 50 
Q 48 V 51 
D 49 A 52 
Q 50 P 53 
P 51 S 54 
D 52 N 55 
Y 53 V 56 
L 54 K 57 
N 55 A 58 
A 56 S 59 
A 57 A 60 
V 58 V 61 
A 59 S 62 
L 60 V 63 
E 61 S 64 
T 62 A 69 
S 63 F 70 
L 64 H 71 
A 65 S 72 
P 66 P 73 
E 67 R 74 
E 68 Y 75 
L 69 E 76 
L 70 G 77 
N 71 V 78 
H 72 T 79 
T 73 A 80 
Q 74 M 81 
R 75 L 82 
I 76 L 83 
E 77 F 84 
L 78 E 85 
Q 79 N 86 
Q 80 P 87 
G 81 S 88 
R 82 D 89 
V 83 I 90 
R 84 V 91 
K 85 S 92 
A 86 L 93 
E 87 I 94 
R 88 E 95 
W 89 A 96 
G 90 G 97 
L 94 V 98 
D 95 P 99 
L 96 I 100 
D 97 K 101 
I 98 V 103 
M 99 N 104 
L 100 V 105 
F 101 G 106 
G 102 G 107 
N 103 M 108 
E 104 R 109 
V 105 F 110 
I 106 E 111 
N 107 N 112 
T 108 H 113 
E 109 R 114 
R 110 R 115 
L 111 Q 116 
T 112 I 117 
V 113 T 118 
P 114 K 119 
H 115 S 120 
Y 116 V 121 
D 117 S 122 
M 118 V 123 
K 119 T 124 
N 120 E 125 
R 121 Q 126 
G 122 D 127 
F 123 I 128 
M 124 A 130 
L 125 F 131 
W 126 E 132 
P 127 T 133 
L 128 L 134 
F 129 S 135 
E 130 D 136 
I 131 K 137 
A 132 G 138 
P 133 V 139 
E 134 K 140 
L 135 L 141 
V 136 E 142 
F 137 L 143 
P 138 R 144 
D 139 Q 145 
G 140 L 146 
E 141 P 147 
M 142 S 148 
L 143 D 149 
R 144 A 150 
Q 145 S 151 
I 146 E 152 
L 147 F 154 
H 148 V 155 
T 149 Q 156 
R 150 I 157 
A 151 L 158 
F 152 R 159 
D 153 N 160 
K 154 V 161 
L 155 T 162 
TER 
END 
