PFRMAT AL 
TARGET T0043 
AUTHOR 4438-1214-3249 
REMARK The N terminal alignment where the active site lies gave a  
REMARK strong signal, however, the C terminal region gave minimal signal.   
REMARK We were greatly reassured by the similarity in substrate and function 
REMARK between the two proteins. 
METHOD H3P2 method (Rice and Eisenberg) found a guanosine kinase 
METHOD Directional Profile Method (Weiss and Eisenberg) gave structures 
METHOD with similar core folds, further validating the fold. 
MODEL 1 
PARENT 1gky 
T 1 R 2  
V 2 P 3  
A 3 I 4 
Y 4 V 5 
I 5 I 6 
A 6 S 7 
G 8 G 8  
S 9 S 10 
N 10 G 11 
L 11 T 12 
A 12 G 13 
S 13 K 14 
E 16 S 15 
Q 17 T 16 
A 21 L 17 
L 22 L 18 
K 23 K 20 
L 25 L 21  
G 26 A 23 
D 27 E 24 
I 28 Y 25  
P 29 P 26 
E 30 D 27 
S 31 S 28 
H 32 F 29 
I 33 G 30 
L 34 F 31 
T 35 S 32 
V 36 V 33 
S 37 S 34 
S 38 S 35 
F 39 T 36 
Y 40 T 37 
R 41 R 38 
T 42 T 39 
P 43 P 40 
P 44 R 41 
L 45 A 42 
G 46 G 43 
Q 48 E 44  
D 49 V 45 
Q 50 N 46 
P 51 G 47 
D 52 D 49 
Y 53 Y 50  
N 55 N 51 
A 56 F 52 
V 58 V 53 
S 63 S 54 
L 64 V 55 
E 67 D 56 
E 68 E 57 
L 69 F 58 
H 72 K 59 
T 73 S 60  
Q 74 M 61 
I 76 I 62 
E 77 K 63 
Q 79 N 64 
Q 80 N 65 
G 81 E 66 
V 83 F 67 
A 86 I 68 
E 87 E 69 
W 89 W 70 
G 90 A 71 
R 92 Q 72  
T 93 F 73 
L 94 S 74 
D 95 G 75 
L 96 N 76 
D 97 Y 77 
I 98 Y 78 
G 102 G 79 
N 103 S 80  
E 104 T 81 
V 105 V 82 
I 106 A 83 
N 107 Q 87 
T 108 S 89 
R 110 K 90 
L 111 L 97  
T 112 D 98 
V 113 I 99 
D 117 D 100  
M 118 M 101 
N 120 Q 102 
G 122 G 103 
L 125 V 104 
W 126 K 105 
P 127 S 106 
L 128 V 107 
E 130 K 108 
A 132 A 109 
P 133 P 111 
E 134 E 112 
L 135 L 113 
V 136 A 115 
F 137 F 119 
P 138 P 123 
D 139 D 127   
G 140 L 128 
E 141 K 129 
M 142 K 130 
L 143 R 131 
R 144 L 132 
Q 145 E 133 
I 146 G 134 
L 147 R 135 
H 148 G 136 
T 149 T 137 
R 150 E 138 
A 151 T 139 
F 152 E 140 
D 153 E 141  
K 154 S 142 
L 155 I 143 
N 156 N 144 
K 157 K 145 
TER 
END 
