PFRMAT AL 
TARGET T0043 
AUTHOR 2746-8822-4809 
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION 
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996 
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED 
METHOD SECONDARY STRUCTURE  
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE 
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS  
MODEL 2 
PARENT 1gky 
L 11    I 6     
A 12    S 7     
S 13    G 8     
P 14    P 9     
L 15    S 10    
E 16    G 11    
Q 17    T 12    
V 18    G 13    
N 19    K 14    
A 20    S 15    
A 21    T 16    
L 22    L 17    
REMARK TAR GAP 2 
K 23    K 20    
A 24    L 21    
L 25    F 22    
G 26    A 23    
D 27    E 24    
I 28    Y 25    
P 29    P 26    
E 30    D 27    
S 31    S 28    
H 32    F 29    
I 33    G 30    
L 34    F 31    
T 35    S 32    
V 36    V 33    
S 37    S 34    
S 38    S 35    
F 39    T 36    
Y 40    T 37    
R 41    R 38    
T 42    T 39    
P 43    P 40    
P 44    R 41    
L 45    A 42    
G 46    G 43    
P 47    E 44    
Q 48    V 45    
D 49    N 46    
Q 50    G 47    
P 51    K 48    
D 52    D 49    
Y 53    Y 50    
REMARK TAR GAP 1 
L 54    F 52    
N 55    V 53    
A 56    S 54    
A 57    V 55    
V 58    D 56    
A 59    E 57    
L 60    F 58    
E 61    K 59    
T 62    S 60    
S 63    M 61    
L 64    I 62    
A 65    K 63    
P 66    N 64    
E 67    N 65    
E 68    E 66    
L 69    F 67    
L 70    I 68    
N 71    E 69    
H 72    W 70    
T 73    A 71    
Q 74    Q 72    
R 75    F 73    
I 76    S 74    
E 77    G 75    
L 78    N 76    
Q 79    Y 77    
Q 80    Y 78    
G 81    G 79    
R 82    S 80    
REMARK TAR GAP 4 
V 83    V 85    
R 84    K 86    
K 85    Q 87    
A 86    V 88    
E 87    S 89    
R 88    K 90    
W 89    S 91    
G 90    G 92    
P 91    K 93    
R 92    T 94    
T 93    C 95    
L 94    I 96    
REMARK REF GAP 1 
L 96    L 97    
D 97    D 98    
I 98    I 99    
M 99    D 100   
L 100   M 101   
F 101   Q 102   
G 102   G 103   
N 103   V 104   
E 104   K 105   
V 105   S 106   
I 106   V 107   
N 107   K 108   
REMARK REF GAP 4 
T 112   A 109   
V 113   I 110   
P 114   P 111   
H 115   E 112   
Y 116   L 113   
D 117   N 114   
TER 
END 
