REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0085AL019_1_3 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : UCSC-COMPBIO 
REMARK  ---------------------------------------------------------- 
TARGET T0085  
AUTHOR 9070-5088-8627  
REMARK   
REMARK Prediction date: Monday June 22, 1998  
REMARK Group name: UCSC-compbio  
REMARK Authors: Christian Barrett, Melissa Cline, Mark Diekhans, Leslie Grate,  
REMARK 	 Kevin Karplus, David Haussler, and Richard Hughey  
REMARK University of California, Santa Cruz  
REMARK   
METHOD Overview  
METHOD   
METHOD Fold recognition was performed using the Target98 (SAM-T98) method  
METHOD [3] using SAM version 2.1.1 [1], a refinement of the methods developed  
METHOD by this group for CASP2 [2].  This method attempts to find and multiply   
METHOD align a set of homologs to a given sequence, then create an HMM from that   
METHOD multiple alignment.  
METHOD   
METHOD First, a set of sequence weights is determined from the alignment.  Next,   
METHOD Modelfromalign is used to build the model from the alignment and the   
METHOD sequence weights.  Finally, hmmscore performs a local, all-paths scoring   
METHOD of the sequences, using a reversed-sequence normalization feature.  
METHOD   
METHOD The weighting method, detailed in upcoming publications [3,4],  
METHOD combines the Henikoffs' scheme [5], Dirichlet mixtures [6], and an  
METHOD entropy method to set the final weights.  
METHOD   
METHOD Alignment generation  
METHOD   
METHOD The initial step uses BLASTP to search NRP twice: once to produce a set  
METHOD of very close homologs, and once to produce a set of possible homologs.  
METHOD   
METHOD The method then uses multiple iterations of a selection, training, and   
METHOD alignment procedure.  Each iteration involves an initial alignment, a set   
METHOD of search sequences, a threshold value, and a transition regularizer.   
METHOD   
METHOD The first iteration uses a single sequence (or seed alignment) as the   
METHOD initial alignment and the close homologs found by BLASTP are used as the   
METHOD search set.  The threshold is set very strictly, so that only good matches   
METHOD to the sequence are considered.  This iteration uses a transition regularizer   
METHOD that was designed to match the gap costs used by BLASTP.  
METHOD   
METHOD On subsequent iterations the input alignment is the output from the  
METHOD previous iteration, the search set is the larger set of possible  
METHOD homologs found by BLASTP, and the thresholds are gradually loosened.  
METHOD The second through second-from-last iteration use a ``long-match''  
METHOD transition regularizer, and the final iteration uses a transition regularizer   
METHOD trained on FSSP alignments.  
METHOD   
METHOD References  
METHOD [1] R. Hughey and A. Krogh, CABIOS 12(2): 95-107, 1996.  
METHOD     http://www.cse.ucsc.edu/research/compbio/sam.html.    
METHOD [2] K. Karplus, K. Sjolander, C. Barrett, M. Cline, D. Haussler, R.  
METHOD     Hughey, L. Holm, and C. Sander, Proteins: Structure, Function, and   
METHOD     Genetics, Suppl. 1, 134-9, 1997.  
METHOD [3] K. Karplus, C. Barrett, and R. Hughey, Technical Report UCSC-CRL-98-06,  
METHOD     Department of Computer Engineering, Univ. of California, Santa Cruz, 1998.  
METHOD [4] J. Park, K. Karplus, C. Barrett, R. Hughey, D. Haussler, T. Hubbard,  
METHOD     and C. Chothia, http://cyrah.med.harvard.edu/~jong/assess_final.html, 1998.  
METHOD [5] S. Henikoff and J. C. Henikoff, JMB, vol 243, pp 574-578, Nov 1994.  
METHOD [6] K. Sjolander, K. Karplus, M. P. Brown, R. Hughey, A. Krogh, I. S.  
METHOD    Mian, and D. Haussler, CABIOS 12(4):327-345, 1996.  
METHOD   
METHOD   
METHOD There are four obvious heme-binding sites in T0085: CSSCHK, CVGCHV,  
METHOD CESCHG, and CSACHL.  
METHOD   
METHOD Our prediction for T0085 should be considered in three parts.    
METHOD   
METHOD The first part includes the first three heme-binding sites.  We are  
METHOD submitting an automatic alignment to 2cthA, which had a summed score  
METHOD of -63. For scores in this range, we had no false positives in our  
METHOD fold-recognition tests.  While 2cthA is a tetraheme protein, it does  
METHOD not appear that T0085 binds heme where 2cthA binds its second heme  
METHOD group.  
METHOD   
METHOD Since the 2cthA left much of T0085, including one heme-binding group,  
METHOD unaligned, we looked further down our list of hits until we found one  
METHOD that aligned well near the remaining heme-binding site.  
METHOD The 1ycc alignment looked good around the heme-binding site, but not so  
METHOD good on the back side of the heme, so we removed that part of the  
METHOD automatic alignment.  
METHOD   
METHOD In place of 1ycc for the fourth heme-binding site, we considered  
METHOD cytochromes 1cor and 1c52, since they associate electrostatically with  
METHOD phospholipid membranes, as T0085 does.  Because of what we considered  
METHOD structural problems, we chose to submit 1ycc plus an alignment to 1avc  
METHOD for the C-terminus instead.  
METHOD   
METHOD   
METHOD   
MODEL 1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1avc 
ATOM      1  N   GLY   148      -6.289  10.131   4.986  1.00  0.00              
ATOM      2  CA  GLY   148      -7.462   9.450   5.500  1.00  0.00              
ATOM      3  C   GLY   148      -8.146   8.713   4.365  1.00  0.00              
ATOM      4  O   GLY   148      -7.633   8.688   3.247  1.00  0.00              
ATOM      5  N   ALA   149      -9.300   8.113   4.641  1.00  0.00              
ATOM      6  CA  ALA   149     -10.031   7.380   3.614  1.00  0.00              
ATOM      7  C   ALA   149     -11.309   8.105   3.210  1.00  0.00              
ATOM      8  O   ALA   149     -11.715   8.062   2.049  1.00  0.00              
ATOM      9  N   LYS   150     -11.941   8.772   4.171  1.00  0.00              
ATOM     10  CA  LYS   150     -13.169   9.510   3.900  1.00  0.00              
ATOM     11  C   LYS   150     -12.841  10.992   3.739  1.00  0.00              
ATOM     12  O   LYS   150     -12.156  11.581   4.575  1.00  0.00              
ATOM     13  N   ALA   151     -13.326  11.582   2.651  1.00  0.00              
ATOM     14  CA  ALA   151     -13.080  12.991   2.370  1.00  0.00              
ATOM     15  C   ALA   151     -14.388  13.764   2.229  1.00  0.00              
ATOM     16  O   ALA   151     -15.417  13.198   1.858  1.00  0.00              
ATOM     17  N   PRO   152     -14.361  15.074   2.526  1.00  0.00              
ATOM     18  CA  PRO   152     -15.553  15.925   2.431  1.00  0.00              
ATOM     19  C   PRO   152     -16.333  15.711   1.138  1.00  0.00              
ATOM     20  O   PRO   152     -15.751  15.614   0.059  1.00  0.00              
ATOM     21  N   TYR   153     -17.655  15.636   1.259  1.00  0.00              
ATOM     22  CA  TYR   153     -18.521  15.430   0.105  1.00  0.00              
ATOM     23  C   TYR   153     -18.685  16.713  -0.703  1.00  0.00              
ATOM     24  O   TYR   153     -18.858  17.795  -0.141  1.00  0.00              
ATOM     25  N   THR   154     -18.624  16.582  -2.024  1.00  0.00              
ATOM     26  CA  THR   154     -18.778  17.736  -2.891  1.00  0.00              
ATOM     27  C   THR   154     -20.241  18.106  -3.024  1.00  0.00              
ATOM     28  O   THR   154     -21.114  17.251  -2.872  1.00  0.00              
ATOM     29  N   PRO   155     -20.515  19.376  -3.311  1.00  0.00              
ATOM     30  CA  PRO   155     -21.890  19.843  -3.447  1.00  0.00              
ATOM     31  C   PRO   155     -22.640  19.502  -2.166  1.00  0.00              
ATOM     32  O   PRO   155     -23.785  19.050  -2.198  1.00  0.00              
ATOM     33  N   PHE   156     -21.971  19.723  -1.039  1.00  0.00              
ATOM     34  CA  PHE   156     -22.528  19.440   0.277  1.00  0.00              
ATOM     35  C   PHE   156     -23.740  20.308   0.600  1.00  0.00              
ATOM     36  O   PHE   156     -23.655  21.536   0.609  1.00  0.00              
ATOM     37  N   THR   157     -24.867  19.655   0.865  1.00  0.00              
ATOM     38  CA  THR   157     -26.104  20.351   1.203  1.00  0.00              
ATOM     39  C   THR   157     -26.647  19.811   2.522  1.00  0.00              
ATOM     40  O   THR   157     -27.382  18.825   2.545  1.00  0.00              
ATOM     41  N   PRO   158     -26.284  20.452   3.644  1.00  0.00              
ATOM     42  CA  PRO   158     -26.752  20.009   4.963  1.00  0.00              
ATOM     43  C   PRO   158     -28.270  19.870   5.029  1.00  0.00              
ATOM     44  O   PRO   158     -28.790  18.883   5.549  1.00  0.00              
ATOM     45  N   GLU   159     -28.972  20.864   4.494  1.00  0.00              
ATOM     46  CA  GLU   159     -30.430  20.872   4.493  1.00  0.00              
ATOM     47  C   GLU   159     -31.018  19.623   3.845  1.00  0.00              
ATOM     48  O   GLU   159     -31.991  19.059   4.343  1.00  0.00              
ATOM     49  N   VAL   160     -30.428  19.196   2.733  1.00  0.00              
ATOM     50  CA  VAL   160     -30.900  18.010   2.029  1.00  0.00              
ATOM     51  C   VAL   160     -30.510  16.758   2.805  1.00  0.00              
ATOM     52  O   VAL   160     -31.209  15.745   2.764  1.00  0.00              
ATOM     53  N   ASP   161     -29.389  16.838   3.514  1.00  0.00              
ATOM     54  CA  ASP   161     -28.898  15.719   4.306  1.00  0.00              
ATOM     55  C   ASP   161     -29.803  15.480   5.507  1.00  0.00              
ATOM     56  O   ASP   161     -30.314  14.377   5.700  1.00  0.00              
ATOM     57  N   ALA   162     -29.996  16.521   6.311  1.00  0.00              
ATOM     58  CA  ALA   162     -30.840  16.432   7.497  1.00  0.00              
ATOM     59  C   ALA   162     -32.229  15.915   7.136  1.00  0.00              
ATOM     60  O   ALA   162     -32.856  15.197   7.915  1.00  0.00              
ATOM     61  N   LYS   163     -32.702  16.284   5.950  1.00  0.00              
ATOM     62  CA  LYS   163     -34.016  15.859   5.483  1.00  0.00              
ATOM     63  C   LYS   163     -34.040  14.358   5.216  1.00  0.00              
ATOM     64  O   LYS   163     -34.941  13.653   5.671  1.00  0.00              
ATOM     65  N   TYR   164     -33.046  13.877   4.476  1.00  0.00              
ATOM     66  CA  TYR   164     -32.949  12.460   4.149  1.00  0.00              
ATOM     67  C   TYR   164     -32.802  11.634   5.422  1.00  0.00              
ATOM     68  O   TYR   164     -33.306  10.514   5.511  1.00  0.00              
ATOM     69  N   THR   165     -32.108  12.198   6.406  1.00  0.00              
ATOM     70  CA  THR   165     -31.896  11.524   7.679  1.00  0.00              
ATOM     71  C   THR   165     -33.210  11.440   8.444  1.00  0.00              
ATOM     72  O   THR   165     -33.580  10.381   8.952  1.00  0.00              
ATOM     73  N   PHE   166     -33.913  12.566   8.521  1.00  0.00              
ATOM     74  CA  PHE   166     -35.191  12.631   9.218  1.00  0.00              
ATOM     75  C   PHE   166     -36.196  11.676   8.581  1.00  0.00              
ATOM     76  O   PHE   166     -36.956  11.005   9.276  1.00  0.00              
ATOM     77  N   LYS   167     -36.186  11.621   7.253  1.00  0.00              
ATOM     78  CA  LYS   167     -37.094  10.756   6.510  1.00  0.00              
ATOM     79  C   LYS   167     -36.804   9.281   6.761  1.00  0.00              
ATOM     80  O   LYS   167     -37.722   8.485   6.954  1.00  0.00              
ATOM     81  N   PHE   168     -36.427   1.668  10.673  1.00  0.00              
ATOM     82  CA  PHE   168     -35.498   2.749  10.372  1.00  0.00              
ATOM     83  C   PHE   168     -34.676   2.458   9.121  1.00  0.00              
ATOM     84  O   PHE   168     -33.935   1.479   9.075  1.00  0.00              
ATOM     85  N   ASP   169     -34.814   3.307   8.107  1.00  0.00              
ATOM     86  CA  ASP   169     -34.067   3.143   6.863  1.00  0.00              
ATOM     87  C   ASP   169     -32.592   3.386   7.165  1.00  0.00              
ATOM     88  O   ASP   169     -32.121   4.523   7.141  1.00  0.00              
ATOM     89  N   GLU   170     -31.867   2.308   7.448  1.00  0.00              
ATOM     90  CA  GLU   170     -30.452   2.397   7.783  1.00  0.00              
ATOM     91  C   GLU   170     -29.518   2.586   6.592  1.00  0.00              
ATOM     92  O   GLU   170     -28.480   3.236   6.713  1.00  0.00              
ATOM     93  N   MET   171     -29.879   2.022   5.444  1.00  0.00              
ATOM     94  CA  MET   171     -29.046   2.143   4.253  1.00  0.00              
ATOM     95  C   MET   171     -28.787   3.605   3.903  1.00  0.00              
ATOM     96  O   MET   171     -27.649   3.997   3.647  1.00  0.00              
ATOM     97  N   VAL   172     -29.847   4.406   3.892  1.00  0.00              
ATOM     98  CA  VAL   172     -29.726   5.826   3.581  1.00  0.00              
ATOM     99  C   VAL   172     -28.907   6.528   4.661  1.00  0.00              
ATOM    100  O   VAL   172     -28.095   7.406   4.368  1.00  0.00              
ATOM    101  N   LYS   173     -29.130   6.132   5.910  1.00  0.00              
ATOM    102  CA  LYS   173     -28.415   6.714   7.038  1.00  0.00              
ATOM    103  C   LYS   173     -26.914   6.493   6.879  1.00  0.00              
ATOM    104  O   LYS   173     -26.107   7.333   7.276  1.00  0.00              
ATOM    105  N   GLU   174     -26.546   5.361   6.289  1.00  0.00              
ATOM    106  CA  GLU   174     -25.142   5.025   6.084  1.00  0.00              
ATOM    107  C   GLU   174     -24.550   5.744   4.874  1.00  0.00              
ATOM    108  O   GLU   174     -23.449   6.288   4.946  1.00  0.00              
ATOM    109  N   VAL   175     -25.286   5.744   3.767  1.00  0.00              
ATOM    110  CA  VAL   175     -24.829   6.387   2.538  1.00  0.00              
ATOM    111  C   VAL   175     -24.457   7.853   2.740  1.00  0.00              
ATOM    112  O   VAL   175     -23.635   8.399   2.003  1.00  0.00              
ATOM    113  N   LYS   176     -25.061   8.489   3.737  1.00  0.00              
ATOM    114  CA  LYS   176     -24.785   9.893   4.016  1.00  0.00              
ATOM    115  C   LYS   176     -23.686  10.069   5.061  1.00  0.00              
ATOM    116  O   LYS   176     -22.620  10.605   4.765  1.00  0.00              
ATOM    117  N   ALA   177     -23.951   9.609   6.280  1.00  0.00              
ATOM    118  CA  ALA   177     -23.001   9.728   7.383  1.00  0.00              
ATOM    119  C   ALA   177     -21.581   9.261   7.062  1.00  0.00              
ATOM    120  O   ALA   177     -20.619  10.001   7.266  1.00  0.00              
ATOM    121  N   MET   178     -21.452   8.036   6.564  1.00  0.00              
ATOM    122  CA  MET   178     -20.142   7.476   6.239  1.00  0.00              
ATOM    123  C   MET   178     -19.456   8.137   5.046  1.00  0.00              
ATOM    124  O   MET   178     -18.304   7.827   4.740  1.00  0.00              
ATOM    125  N   HIS   179     -20.158   9.042   4.374  1.00  0.00              
ATOM    126  CA  HIS   179     -19.591   9.721   3.216  1.00  0.00              
ATOM    127  C   HIS   179     -19.531  11.234   3.402  1.00  0.00              
ATOM    128  O   HIS   179     -19.775  11.997   2.467  1.00  0.00              
ATOM    129  N   GLU   180     -19.203  11.656   4.619  1.00  0.00              
ATOM    130  CA  GLU   180     -19.096  13.072   4.949  1.00  0.00              
ATOM    131  C   GLU   180     -18.020  13.273   6.009  1.00  0.00              
ATOM    132  O   GLU   180     -17.941  12.512   6.974  1.00  0.00              
ATOM    133  N   HIS   181     -17.189  14.294   5.826  1.00  0.00              
ATOM    134  CA  HIS   181     -16.130  14.586   6.783  1.00  0.00              
ATOM    135  C   HIS   181     -16.761  14.895   8.134  1.00  0.00              
ATOM    136  O   HIS   181     -17.870  15.427   8.199  1.00  0.00              
ATOM    137  N   TYR   182     -16.059  14.555   9.211  1.00  0.00              
ATOM    138  CA  TYR   182     -16.566  14.799  10.556  1.00  0.00              
ATOM    139  C   TYR   182     -17.075  16.229  10.698  1.00  0.00              
ATOM    140  O   TYR   182     -18.030  16.486  11.429  1.00  0.00              
ATOM    141  N   LYS   183     -16.432  17.155   9.994  1.00  0.00              
ATOM    142  CA  LYS   183     -16.826  18.557  10.035  1.00  0.00              
ATOM    143  C   LYS   183     -18.197  18.725   9.391  1.00  0.00              
ATOM    144  O   LYS   183     -19.104  19.316   9.979  1.00  0.00              
ATOM    145  N   LEU   184     -18.341  18.201   8.177  1.00  0.00              
ATOM    146  CA  LEU   184     -19.605  18.283   7.455  1.00  0.00              
ATOM    147  C   LEU   184     -20.703  17.635   8.290  1.00  0.00              
ATOM    148  O   LEU   184     -21.859  18.055   8.249  1.00  0.00              
ATOM    149  N   GLU   185     -20.331  16.608   9.047  1.00  0.00              
ATOM    150  CA  GLU   185     -21.276  15.906   9.902  1.00  0.00              
ATOM    151  C   GLU   185     -21.773  16.864  10.976  1.00  0.00              
ATOM    152  O   GLU   185     -22.971  16.944  11.245  1.00  0.00              
ATOM    153  N   GLY   186     -20.840  17.591  11.585  1.00  0.00              
ATOM    154  CA  GLY   186     -21.180  18.557  12.624  1.00  0.00              
ATOM    155  C   GLY   186     -22.150  19.581  12.050  1.00  0.00              
ATOM    156  O   GLY   186     -22.953  20.170  12.774  1.00  0.00              
ATOM    157  N   VAL   187     -22.066  19.787  10.739  1.00  0.00              
ATOM    158  CA  VAL   187     -22.936  20.730  10.054  1.00  0.00              
ATOM    159  C   VAL   187     -24.346  20.157   9.961  1.00  0.00              
ATOM    160  O   VAL   187     -25.327  20.852  10.227  1.00  0.00              
ATOM    161  N   PHE   188     -24.439  18.886   9.583  1.00  0.00              
ATOM    162  CA  PHE   188     -25.729  18.219   9.463  1.00  0.00              
ATOM    163  C   PHE   188     -26.428  18.213  10.818  1.00  0.00              
ATOM    164  O   PHE   188     -27.656  18.206  10.893  1.00  0.00              
ATOM    165  N   GLU   189     -25.639  18.219  11.887  1.00  0.00              
ATOM    166  CA  GLU   189     -26.185  18.235  13.237  1.00  0.00              
ATOM    167  C   GLU   189     -26.771  19.619  13.487  1.00  0.00              
ATOM    168  O   GLU   189     -27.903  19.755  13.952  1.00  0.00              
ATOM    169  N   GLY   190     -25.986  20.644  13.168  1.00  0.00              
ATOM    170  CA  GLY   190     -26.407  22.029  13.336  1.00  0.00              
ATOM    171  C   GLY   190     -27.692  22.263  12.553  1.00  0.00              
ATOM    172  O   GLY   190     -28.692  22.727  13.099  1.00  0.00              
ATOM    173  N   GLU   191     -27.648  21.937  11.265  1.00  0.00              
ATOM    174  CA  GLU   191     -28.795  22.101  10.382  1.00  0.00              
ATOM    175  C   GLU   191     -30.008  21.351  10.918  1.00  0.00              
ATOM    176  O   GLU   191     -31.058  21.946  11.163  1.00  0.00              
ATOM    177  N   PRO   192     -29.856  20.042  11.095  1.00  0.00              
ATOM    178  CA  PRO   192     -30.933  19.200  11.600  1.00  0.00              
ATOM    179  C   PRO   192     -31.627  19.857  12.786  1.00  0.00              
ATOM    180  O   PRO   192     -32.854  19.939  12.831  1.00  0.00              
ATOM    181  N   LYS   193     -30.834  20.326  13.743  1.00  0.00              
ATOM    182  CA  LYS   193     -31.369  20.975  14.933  1.00  0.00              
ATOM    183  C   LYS   193     -32.084  22.276  14.585  1.00  0.00              
ATOM    184  O   LYS   193     -33.250  22.463  14.929  1.00  0.00              
ATOM    185  N   PHE   194     -31.381  23.171  13.898  1.00  0.00              
ATOM    186  CA  PHE   194     -31.945  24.460  13.510  1.00  0.00              
ATOM    187  C   PHE   194     -33.014  24.331  12.428  1.00  0.00              
ATOM    188  O   PHE   194     -33.384  25.319  11.792  1.00  0.00              
ATOM    189  N   LYS   195     -33.510  23.115  12.224  1.00  0.00              
ATOM    190  CA  LYS   195     -34.535  22.869  11.217  1.00  0.00              
ATOM    191  C   LYS   195     -35.748  22.165  11.817  1.00  0.00              
ATOM    192  O   LYS   195     -36.889  22.523  11.524  1.00  0.00              
ATOM    193  N   PHE   196     -35.497  21.165  12.658  1.00  0.00              
ATOM    194  CA  PHE   196     -36.569  20.401  13.290  1.00  0.00              
ATOM    195  C   PHE   196     -36.648  20.634  14.794  1.00  0.00              
ATOM    196  O   PHE   196     -37.586  20.177  15.448  1.00  0.00              
ATOM    197  N   HIS   197     -35.666  21.340  15.341  1.00  0.00              
ATOM    198  CA  HIS   197     -35.662  21.592  16.770  1.00  0.00              
ATOM    199  C   HIS   197     -35.440  20.302  17.537  1.00  0.00              
ATOM    200  O   HIS   197     -35.827  20.181  18.700  1.00  0.00              
ATOM    201  N   ASP   198     -34.814  19.333  16.876  1.00  0.00              
ATOM    202  CA  ASP   198     -34.529  18.037  17.482  1.00  0.00              
ATOM    203  C   ASP   198     -33.044  17.709  17.381  1.00  0.00              
ATOM    204  O   ASP   198     -32.374  18.111  16.429  1.00  0.00              
ATOM    205  N   GLU   199     -32.535  16.975  18.365  1.00  0.00              
ATOM    206  CA  GLU   199     -31.131  16.580  18.379  1.00  0.00              
ATOM    207  C   GLU   199     -30.959  15.328  17.527  1.00  0.00              
ATOM    208  O   GLU   199     -31.543  14.285  17.823  1.00  0.00              
ATOM    209  N   PHE   200     -30.159  15.433  16.471  1.00  0.00              
ATOM    210  CA  PHE   200     -29.927  14.307  15.574  1.00  0.00              
ATOM    211  C   PHE   200     -29.364  13.089  16.295  1.00  0.00              
ATOM    212  O   PHE   200     -29.793  11.964  16.045  1.00  0.00              
ATOM    213  N   GLN   201     -28.402  13.314  17.184  1.00  0.00              
ATOM    214  CA  GLN   201     -27.784  12.225  17.934  1.00  0.00              
ATOM    215  C   GLN   201     -28.822  11.414  18.707  1.00  0.00              
ATOM    216  O   GLN   201     -28.854  10.187  18.616  1.00  0.00              
ATOM    217  N   ALA   202     -29.667  12.104  19.466  1.00  0.00              
ATOM    218  CA  ALA   202     -30.704  11.443  20.251  1.00  0.00              
ATOM    219  C   ALA   202     -31.606  10.612  19.346  1.00  0.00              
ATOM    220  O   ALA   202     -32.026   9.514  19.711  1.00  0.00              
ATOM    221  N   SER   203     -31.898  11.144  18.164  1.00  0.00              
ATOM    222  CA  SER   203     -32.744  10.451  17.201  1.00  0.00              
ATOM    223  C   SER   203     -31.999   9.252  16.626  1.00  0.00              
ATOM    224  O   SER   203     -32.574   8.179  16.437  1.00  0.00              
ATOM    225  N   ALA   204     -30.713   9.445  16.349  1.00  0.00              
ATOM    226  CA  ALA   204     -29.869   8.392  15.798  1.00  0.00              
ATOM    227  C   ALA   204     -29.687   7.274  16.817  1.00  0.00              
ATOM    228  O   ALA   204     -29.827   6.093  16.498  1.00  0.00              
ATOM    229  N   LYS   205     -29.369   7.663  18.047  1.00  0.00              
ATOM    230  CA  LYS   205     -29.158   6.716  19.134  1.00  0.00              
ATOM    231  C   LYS   205     -30.382   5.832  19.350  1.00  0.00              
ATOM    232  O   LYS   205     -30.262   4.620  19.526  1.00  0.00              
ATOM    233  N   PRO   206     -31.560   6.446  19.327  1.00  0.00              
ATOM    234  CA  PRO   206     -32.806   5.720  19.547  1.00  0.00              
ATOM    235  C   PRO   206     -33.262   4.861  18.371  1.00  0.00              
ATOM    236  O   PRO   206     -33.782   3.761  18.565  1.00  0.00              
ATOM    237  N   ALA   207     -33.074   5.351  17.153  1.00  0.00              
ATOM    238  CA  ALA   207     -33.491   4.607  15.972  1.00  0.00              
ATOM    239  C   ALA   207     -32.480   3.550  15.519  1.00  0.00              
ATOM    240  O   ALA   207     -32.818   2.640  14.761  1.00  0.00              
ATOM    241  N   LYS   208     -31.241   3.667  15.989  1.00  0.00              
ATOM    242  CA  LYS   208     -30.200   2.704  15.633  1.00  0.00              
ATOM    243  C   LYS   208     -29.845   1.826  16.832  1.00  0.00              
ATOM    244  O   LYS   208     -30.101   2.196  17.979  1.00  0.00              
ATOM    245  N   LYS   209     -29.257   0.664  16.566  1.00  0.00              
ATOM    246  CA  LYS   209     -28.880  -0.262  17.632  1.00  0.00              
ATOM    247  C   LYS   209     -27.711  -1.163  17.241  1.00  0.00              
ATOM    248  O   LYS   209     -27.406  -1.323  16.060  1.00  0.00              
ATOM    249  N   GLY   210     -27.061  -1.745  18.245  1.00  0.00              
ATOM    250  CA  GLY   210     -25.942  -2.638  17.997  1.00  0.00              
ATOM    251  C   GLY   210     -24.654  -1.956  17.581  1.00  0.00              
ATOM    252  O   GLY   210     -24.478  -0.754  17.784  1.00  0.00              
ATOM    253  N   LYS   211     -23.747  -2.737  17.000  1.00  0.00              
ATOM    254  CA  LYS   211     -22.460  -2.224  16.544  1.00  0.00              
ATOM    255  C   LYS   211     -22.663  -1.055  15.589  1.00  0.00              
ATOM    256  O   LYS   211     -21.913  -0.079  15.620  1.00  0.00              
END
