REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0084AL215_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0084  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1vpt 
ATOM      1  N   GLY     3      15.361  38.454  34.069  1.00  0.00              
ATOM      2  CA  GLY     3      14.212  39.314  33.836  1.00  0.00              
ATOM      3  C   GLY     3      13.867  39.191  32.366  1.00  0.00              
ATOM      4  O   GLY     3      14.742  39.322  31.514  1.00  0.00              
ATOM      5  N   ARG     4      12.604  38.883  32.073  1.00  0.00              
ATOM      6  CA  ARG     4      12.131  38.727  30.706  1.00  0.00              
ATOM      7  C   ARG     4      10.881  39.532  30.471  1.00  0.00              
ATOM      8  O   ARG     4      10.109  39.772  31.395  1.00  0.00              
ATOM      9  N   GLU     5      10.679  39.934  29.221  1.00  0.00              
ATOM     10  CA  GLU     5       9.494  40.691  28.840  1.00  0.00              
ATOM     11  C   GLU     5       8.344  39.719  28.647  1.00  0.00              
ATOM     12  O   GLU     5       7.318  39.809  29.305  1.00  0.00              
ATOM     13  N   GLY     6       8.542  38.792  27.722  1.00  0.00              
ATOM     14  CA  GLY     6       7.566  37.768  27.401  1.00  0.00              
ATOM     15  C   GLY     6       8.301  36.461  27.122  1.00  0.00              
ATOM     16  O   GLY     6       9.542  36.446  27.019  1.00  0.00              
ATOM     17  N   VAL     7       7.566  35.328  27.142  1.00  0.00              
ATOM     18  CA  VAL     7       8.213  34.039  26.873  1.00  0.00              
ATOM     19  C   VAL     7       8.174  33.737  25.366  1.00  0.00              
ATOM     20  O   VAL     7       7.567  34.498  24.591  1.00  0.00              
ATOM     21  N   LEU     8       8.870  32.675  24.952  1.00  0.00              
ATOM     22  CA  LEU     8       8.850  32.245  23.557  1.00  0.00              
ATOM     23  C   LEU     8       7.521  31.491  23.416  1.00  0.00              
ATOM     24  O   LEU     8       7.273  30.538  24.166  1.00  0.00              
ATOM     25  N   LYS     9       6.659  31.966  22.517  1.00  0.00              
ATOM     26  CA  LYS     9       5.360  31.356  22.256  1.00  0.00              
ATOM     27  C   LYS     9       5.408  30.378  21.087  1.00  0.00              
ATOM     28  O   LYS     9       4.745  29.338  21.110  1.00  0.00              
ATOM     29  N   LYS    10       6.196  30.719  20.069  1.00  0.00              
ATOM     30  CA  LYS    10       6.349  29.883  18.874  1.00  0.00              
ATOM     31  C   LYS    10       7.804  29.509  18.606  1.00  0.00              
ATOM     32  O   LYS    10       8.721  30.227  19.038  1.00  0.00              
ATOM     33  N   LEU    11       7.999  28.389  17.899  1.00  0.00              
ATOM     34  CA  LEU    11       9.334  27.862  17.583  1.00  0.00              
ATOM     35  C   LEU    11      10.207  28.897  16.868  1.00  0.00              
ATOM     36  O   LEU    11      11.390  29.084  17.175  1.00  0.00              
ATOM     37  N   ARG    12       9.537  29.648  16.012  1.00  0.00              
ATOM     38  CA  ARG    12      10.120  30.668  15.178  1.00  0.00              
ATOM     39  C   ARG    12      10.749  31.818  15.961  1.00  0.00              
ATOM     40  O   ARG    12      11.583  32.555  15.435  1.00  0.00              
ATOM     41  N   ALA    13      10.367  31.952  17.226  1.00  0.00              
ATOM     42  CA  ALA    13      10.882  33.009  18.093  1.00  0.00              
ATOM     43  C   ALA    13      12.196  32.643  18.769  1.00  0.00              
ATOM     44  O   ALA    13      12.939  33.535  19.215  1.00  0.00              
ATOM     45  N   VAL    14      12.481  31.342  18.861  1.00  0.00              
ATOM     46  CA  VAL    14      13.718  30.877  19.490  1.00  0.00              
ATOM     47  C   VAL    14      14.902  31.460  18.700  1.00  0.00              
ATOM     48  O   VAL    14      15.095  31.154  17.528  1.00  0.00              
ATOM     49  N   GLU    15      15.662  32.334  19.345  1.00  0.00              
ATOM     50  CA  GLU    15      16.772  32.999  18.682  1.00  0.00              
ATOM     51  C   GLU    15      18.152  32.538  19.120  1.00  0.00              
ATOM     52  O   GLU    15      19.056  33.351  19.269  1.00  0.00              
ATOM     53  N   ASN    16      18.314  31.248  19.369  1.00  0.00              
ATOM     54  CA  ASN    16      19.611  30.741  19.767  1.00  0.00              
ATOM     55  C   ASN    16      19.589  29.225  19.734  1.00  0.00              
ATOM     56  O   ASN    16      18.513  28.618  19.700  1.00  0.00              
ATOM     57  N   GLU    17      20.778  28.622  19.683  1.00  0.00              
ATOM     58  CA  GLU    17      20.913  27.170  19.637  1.00  0.00              
ATOM     59  C   GLU    17      22.095  26.599  20.387  1.00  0.00              
ATOM     60  O   GLU    17      23.059  27.300  20.662  1.00  0.00              
ATOM     61  N   LEU    18      21.985  25.317  20.719  1.00  0.00              
ATOM     62  CA  LEU    18      22.978  24.582  21.498  1.00  0.00              
ATOM     63  C   LEU    18      23.156  23.171  20.950  1.00  0.00              
ATOM     64  O   LEU    18      22.184  22.520  20.556  1.00  0.00              
ATOM     65  N   HIS    19      24.386  22.673  20.992  1.00  0.00              
ATOM     66  CA  HIS    19      24.661  21.328  20.513  1.00  0.00              
ATOM     67  C   HIS    19      23.937  20.358  21.444  1.00  0.00              
ATOM     68  O   HIS    19      24.130  20.396  22.664  1.00  0.00              
ATOM     69  N   TYR    20      23.058  19.539  20.873  1.00  0.00              
ATOM     70  CA  TYR    20      22.305  18.559  21.640  1.00  0.00              
ATOM     71  C   TYR    20      23.224  17.550  22.330  1.00  0.00              
ATOM     72  O   TYR    20      24.106  16.971  21.702  1.00  0.00              
ATOM     73  N   ASN    21      23.009  17.343  23.624  1.00  0.00              
ATOM     74  CA  ASN    21      23.802  16.399  24.391  1.00  0.00              
ATOM     75  C   ASN    21      22.908  15.212  24.724  1.00  0.00              
ATOM     76  O   ASN    21      22.065  15.292  25.608  1.00  0.00              
ATOM     77  N   LYS    22      23.086  14.087  24.008  1.00  0.00              
ATOM     78  CA  LYS    22      22.305  12.859  24.198  1.00  0.00              
ATOM     79  C   LYS    22      22.138  12.360  25.628  1.00  0.00              
ATOM     80  O   LYS    22      21.212  11.597  25.904  1.00  0.00              
ATOM     81  N   SER    23      22.891  12.806  26.561  1.00  0.00              
ATOM     82  CA  SER    23      22.873  12.380  27.959  1.00  0.00              
ATOM     83  C   SER    23      21.711  13.063  28.705  1.00  0.00              
ATOM     84  O   SER    23      21.414  12.745  29.863  1.00  0.00              
ATOM     85  N   LEU    24      21.103  14.002  27.950  1.00  0.00              
ATOM     86  CA  LEU    24      19.956  14.727  28.467  1.00  0.00              
ATOM     87  C   LEU    24      18.746  13.798  28.577  1.00  0.00              
ATOM     88  O   LEU    24      17.850  14.009  29.404  1.00  0.00              
ATOM     89  N   LEU    25      18.751  12.750  27.755  1.00  0.00              
ATOM     90  CA  LEU    25      17.672  11.767  27.721  1.00  0.00              
ATOM     91  C   LEU    25      17.444  11.044  29.043  1.00  0.00              
ATOM     92  O   LEU    25      16.337  10.596  29.314  1.00  0.00              
ATOM     93  N   GLU    26      18.475  10.959  29.877  1.00  0.00              
ATOM     94  CA  GLU    26      18.363  10.261  31.158  1.00  0.00              
ATOM     95  C   GLU    26      18.099  11.183  32.337  1.00  0.00              
ATOM     96  O   GLU    26      18.124  10.753  33.494  1.00  0.00              
ATOM     97  N   GLU    27      17.772  12.419  31.961  1.00  0.00              
ATOM     98  CA  GLU    27      17.450  13.448  32.938  1.00  0.00              
ATOM     99  C   GLU    27      15.963  13.365  33.261  1.00  0.00              
ATOM    100  O   GLU    27      15.158  12.981  32.401  1.00  0.00              
ATOM    101  N   VAL    28      15.621  13.759  34.541  1.00  0.00              
ATOM    102  CA  VAL    28      14.211  13.779  34.935  1.00  0.00              
ATOM    103  C   VAL    28      13.342  14.486  33.903  1.00  0.00              
ATOM    104  O   VAL    28      13.543  15.671  33.613  1.00  0.00              
ATOM    105  N   LYS    29      12.379  13.747  33.356  1.00  0.00              
ATOM    106  CA  LYS    29      11.468  14.282  32.350  1.00  0.00              
ATOM    107  C   LYS    29      10.260  15.062  32.927  1.00  0.00              
ATOM    108  O   LYS    29       9.783  16.021  32.320  1.00  0.00              
ATOM    109  N   ASP    30       9.740  14.659  34.075  1.00  0.00              
ATOM    110  CA  ASP    30       8.617  15.408  34.623  1.00  0.00              
ATOM    111  C   ASP    30       8.689  15.624  36.139  1.00  0.00              
ATOM    112  O   ASP    30       9.177  14.778  36.892  1.00  0.00              
ATOM    113  N   GLU    31       8.208  16.782  36.568  1.00  0.00              
ATOM    114  CA  GLU    31       8.246  17.169  37.969  1.00  0.00              
ATOM    115  C   GLU    31       6.877  17.316  38.649  1.00  0.00              
ATOM    116  O   GLU    31       6.824  17.624  39.853  1.00  0.00              
ATOM    117  N   LEU    32       5.797  17.107  37.877  1.00  0.00              
ATOM    118  CA  LEU    32       4.409  17.229  38.351  1.00  0.00              
ATOM    119  C   LEU    32       3.554  16.008  38.079  1.00  0.00              
ATOM    120  O   LEU    32       3.748  15.326  37.072  1.00  0.00              
ATOM    121  N   GLN    33       2.625  15.681  39.000  1.00  0.00              
ATOM    122  CA  GLN    33       1.762  14.525  38.758  1.00  0.00              
ATOM    123  C   GLN    33       0.781  14.985  37.674  1.00  0.00              
ATOM    124  O   GLN    33       0.423  16.170  37.598  1.00  0.00              
ATOM    125  N   LYS    34       0.433  14.070  36.784  1.00  0.00              
ATOM    126  CA  LYS    34      -0.466  14.360  35.675  1.00  0.00              
ATOM    127  C   LYS    34       0.049  15.502  34.807  1.00  0.00              
ATOM    128  O   LYS    34      -0.754  16.181  34.164  1.00  0.00              
ATOM    129  N   MET    35       1.370  15.692  34.751  1.00  0.00              
ATOM    130  CA  MET    35       1.973  16.781  33.961  1.00  0.00              
ATOM    131  C   MET    35       1.591  16.743  32.473  1.00  0.00              
ATOM    132  O   MET    35       1.429  17.789  31.837  1.00  0.00              
ATOM    133  N   ARG    36       1.397  15.536  31.942  1.00  0.00              
ATOM    134  CA  ARG    36       1.015  15.379  30.551  1.00  0.00              
ATOM    135  C   ARG    36      -0.390  15.888  30.258  1.00  0.00              
ATOM    136  O   ARG    36      -0.625  16.455  29.193  1.00  0.00              
ATOM    137  N   GLN    37      -1.338  15.671  31.181  1.00  0.00              
ATOM    138  CA  GLN    37      -2.720  16.149  30.997  1.00  0.00              
ATOM    139  C   GLN    37      -2.729  17.686  31.065  1.00  0.00              
ATOM    140  O   GLN    37      -3.510  18.357  30.379  1.00  0.00              
END
