REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0079AL156_1_2 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : BENNER-COHEN 
REMARK  ---------------------------------------------------------- 
TARGET T0079  
AUTHOR 5529-3140-9255  
REMARK Prediction team BENNER-COHEN has two group leaders,  
REMARK but we will consistently use Steven Benner's predictor  
REMARK number to avoid confusion concerning a second team  
REMARK connected with Fred Cohen (called Cohen, Fred).  
REMARK (Fred Cohen's number as a group leader is 6140-7890-6093).  
REMARK Prediction team members: D.L.Gerloff, G.Cannarozzi,  
REMARK M.Joachimiak, F.E.Cohen & S.A.Benner.  
REMARK  
REMARK This threading alignment prediction is NOT accompanied by  
REMARK a separate secondary structure submission !!  
REMARK   
METHOD Comments and method remarks will follow. Methods used  
METHOD are similar to what we described in our prediction for  
METHOD T0074.  
METHOD   
MODEL  1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1oct_C 
ATOM      1  N   ILE    68     -14.435  43.392  -9.286  1.00  0.00              
ATOM      2  CA  ILE    68     -14.131  42.228 -10.109  1.00  0.00              
ATOM      3  C   ILE    68     -14.648  40.937  -9.501  1.00  0.00              
ATOM      4  O   ILE    68     -15.211  40.094 -10.198  1.00  0.00              
ATOM      5  N   ALA    69     -14.444  40.793  -8.197  1.00  0.00              
ATOM      6  CA  ALA    69     -14.889  39.613  -7.482  1.00  0.00              
ATOM      7  C   ALA    69     -16.379  39.431  -7.739  1.00  0.00              
ATOM      8  O   ALA    69     -16.810  38.389  -8.248  1.00  0.00              
ATOM      9  N   GLN    70     -17.136  40.497  -7.482  1.00  0.00              
ATOM     10  CA  GLN    70     -18.586  40.492  -7.654  1.00  0.00              
ATOM     11  C   GLN    70     -19.065  40.200  -9.076  1.00  0.00              
ATOM     12  O   GLN    70     -19.745  39.192  -9.305  1.00  0.00              
ATOM     13  N   LYS    71     -18.735  41.079 -10.021  1.00  0.00              
ATOM     14  CA  LYS    71     -19.158  40.877 -11.408  1.00  0.00              
ATOM     15  C   LYS    71     -18.796  39.463 -11.838  1.00  0.00              
ATOM     16  O   LYS    71     -19.572  38.794 -12.523  1.00  0.00              
ATOM     17  N   LEU    72     -17.641  38.995 -11.376  1.00  0.00              
ATOM     18  CA  LEU    72     -17.199  37.661 -11.719  1.00  0.00              
ATOM     19  C   LEU    72     -18.198  36.635 -11.226  1.00  0.00              
ATOM     20  O   LEU    72     -18.549  35.716 -11.962  1.00  0.00              
ATOM     21  N   LYS    73     -18.668  36.795  -9.992  1.00  0.00              
ATOM     22  CA  LYS    73     -19.629  35.847  -9.438  1.00  0.00              
ATOM     23  C   LYS    73     -20.896  35.797 -10.294  1.00  0.00              
ATOM     24  O   LYS    73     -21.418  34.716 -10.578  1.00  0.00              
ATOM     25  N   GLU    74     -21.337  36.963 -10.763  1.00  0.00              
ATOM     26  CA  GLU    74     -22.535  37.056 -11.594  1.00  0.00              
ATOM     27  C   GLU    74     -22.327  36.347 -12.916  1.00  0.00              
ATOM     28  O   GLU    74     -22.925  35.300 -13.165  1.00  0.00              
ATOM     29  N   SER    75     -21.460  36.921 -13.750  1.00  0.00              
ATOM     30  CA  SER    75     -21.147  36.358 -15.056  1.00  0.00              
ATOM     31  C   SER    75     -20.975  34.843 -14.975  1.00  0.00              
ATOM     32  O   SER    75     -21.649  34.098 -15.680  1.00  0.00              
ATOM     33  N   ASN    76     -20.153  34.401 -14.027  1.00  0.00              
ATOM     34  CA  ASN    76     -19.865  32.982 -13.826  1.00  0.00              
ATOM     35  C   ASN    76     -21.096  32.096 -13.702  1.00  0.00              
ATOM     36  O   ASN    76     -21.238  31.097 -14.417  1.00  0.00              
ATOM     37  N   GLU    77     -21.956  32.434 -12.750  1.00  0.00              
ATOM     38  CA  GLU    77     -23.145  31.636 -12.515  1.00  0.00              
ATOM     39  C   GLU    77     -24.154  31.765 -13.646  1.00  0.00              
ATOM     40  O   GLU    77     -24.773  30.772 -14.039  1.00  0.00              
ATOM     41  N   PRO    78     -20.590  26.271 -12.104  1.00  0.00              
ATOM     42  CA  PRO    78     -20.449  26.119 -10.671  1.00  0.00              
ATOM     43  C   PRO    78     -19.003  26.492 -10.371  1.00  0.00              
ATOM     44  O   PRO    78     -18.169  26.531 -11.277  1.00  0.00              
ATOM     45  N   ILE    79     -18.697  26.768  -9.110  1.00  0.00              
ATOM     46  CA  ILE    79     -17.330  27.100  -8.734  1.00  0.00              
ATOM     47  C   ILE    79     -16.479  25.877  -9.023  1.00  0.00              
ATOM     48  O   ILE    79     -15.297  25.998  -9.323  1.00  0.00              
ATOM     49  N   LEU    80     -17.105  24.703  -8.945  1.00  0.00              
ATOM     50  CA  LEU    80     -16.417  23.449  -9.202  1.00  0.00              
ATOM     51  C   LEU    80     -15.898  23.344 -10.623  1.00  0.00              
ATOM     52  O   LEU    80     -14.785  22.863 -10.850  1.00  0.00              
ATOM     53  N   TYR    81     -16.712  23.777 -11.584  1.00  0.00              
ATOM     54  CA  TYR    81     -16.310  23.752 -12.988  1.00  0.00              
ATOM     55  C   TYR    81     -15.209  24.786 -13.136  1.00  0.00              
ATOM     56  O   TYR    81     -14.072  24.452 -13.474  1.00  0.00              
ATOM     57  N   LEU    82     -15.555  26.031 -12.809  1.00  0.00              
ATOM     58  CA  LEU    82     -14.641  27.163 -12.887  1.00  0.00              
ATOM     59  C   LEU    82     -13.252  26.817 -12.378  1.00  0.00              
ATOM     60  O   LEU    82     -12.248  27.213 -12.966  1.00  0.00              
ATOM     61  N   ALA    83     -13.198  26.073 -11.283  1.00  0.00              
ATOM     62  CA  ALA    83     -11.915  25.695 -10.733  1.00  0.00              
ATOM     63  C   ALA    83     -11.177  24.780 -11.683  1.00  0.00              
ATOM     64  O   ALA    83     -10.095  25.114 -12.163  1.00  0.00              
ATOM     65  N   GLU    84     -11.818  23.665 -12.021  1.00  0.00              
ATOM     66  CA  GLU    84     -11.233  22.660 -12.905  1.00  0.00              
ATOM     67  C   GLU    84     -11.023  23.095 -14.359  1.00  0.00              
ATOM     68  O   GLU    84     -10.223  22.486 -15.082  1.00  0.00              
ATOM     69  N   ARG    85     -11.719  24.152 -14.780  1.00  0.00              
ATOM     70  CA  ARG    85     -11.583  24.662 -16.143  1.00  0.00              
ATOM     71  C   ARG    85     -10.184  25.236 -16.265  1.00  0.00              
ATOM     72  O   ARG    85      -9.485  25.017 -17.255  1.00  0.00              
ATOM     73  N   TYR    86      -9.765  25.933 -15.217  1.00  0.00              
ATOM     74  CA  TYR    86      -8.439  26.520 -15.176  1.00  0.00              
ATOM     75  C   TYR    86      -7.420  25.393 -15.114  1.00  0.00              
ATOM     76  O   TYR    86      -6.236  25.590 -15.402  1.00  0.00              
ATOM     77  N   SER    90      -9.360  24.003  -6.487  1.00  0.00              
ATOM     78  CA  SER    90     -10.527  23.424  -5.841  1.00  0.00              
ATOM     79  C   SER    90     -11.650  24.443  -5.741  1.00  0.00              
ATOM     80  O   SER    90     -11.432  25.655  -5.838  1.00  0.00              
ATOM     81  N   GLN    91     -12.854  23.930  -5.538  1.00  0.00              
ATOM     82  CA  GLN    91     -14.035  24.764  -5.406  1.00  0.00              
ATOM     83  C   GLN    91     -13.859  25.726  -4.237  1.00  0.00              
ATOM     84  O   GLN    91     -14.282  26.883  -4.295  1.00  0.00              
ATOM     85  N   GLN    92     -13.183  25.239  -3.200  1.00  0.00              
ATOM     86  CA  GLN    92     -12.918  26.015  -1.997  1.00  0.00              
ATOM     87  C   GLN    92     -12.244  27.350  -2.308  1.00  0.00              
ATOM     88  O   GLN    92     -12.728  28.398  -1.890  1.00  0.00              
ATOM     89  N   THR    93     -11.153  27.312  -3.070  1.00  0.00              
ATOM     90  CA  THR    93     -10.430  28.529  -3.425  1.00  0.00              
ATOM     91  C   THR    93     -11.306  29.490  -4.211  1.00  0.00              
ATOM     92  O   THR    93     -11.250  30.703  -4.005  1.00  0.00              
ATOM     93  N   LEU    94     -12.130  28.934  -5.092  1.00  0.00              
ATOM     94  CA  LEU    94     -13.013  29.738  -5.923  1.00  0.00              
ATOM     95  C   LEU    94     -14.036  30.445  -5.056  1.00  0.00              
ATOM     96  O   LEU    94     -14.241  31.651  -5.172  1.00  0.00              
ATOM     97  N   THR    95     -14.650  29.679  -4.164  1.00  0.00              
ATOM     98  CA  THR    95     -15.654  30.201  -3.253  1.00  0.00              
ATOM     99  C   THR    95     -15.070  31.316  -2.417  1.00  0.00              
ATOM    100  O   THR    95     -15.642  32.396  -2.328  1.00  0.00              
ATOM    101  N   ARG    96     -13.913  31.047  -1.824  1.00  0.00              
ATOM    102  CA  ARG    96     -13.243  32.026  -0.987  1.00  0.00              
ATOM    103  C   ARG    96     -12.879  33.276  -1.746  1.00  0.00              
ATOM    104  O   ARG    96     -12.929  34.369  -1.189  1.00  0.00              
ATOM    105  N   THR    97     -12.508  33.124  -3.014  1.00  0.00              
ATOM    106  CA  THR    97     -12.146  34.288  -3.810  1.00  0.00              
ATOM    107  C   THR    97     -13.381  35.145  -4.025  1.00  0.00              
ATOM    108  O   THR    97     -13.314  36.371  -3.967  1.00  0.00              
ATOM    109  N   PHE    98     -14.511  34.491  -4.258  1.00  0.00              
ATOM    110  CA  PHE    98     -15.749  35.207  -4.483  1.00  0.00              
ATOM    111  C   PHE    98     -16.188  35.945  -3.236  1.00  0.00              
ATOM    112  O   PHE    98     -16.604  37.098  -3.301  1.00  0.00              
ATOM    113  N   LYS    99     -16.050  35.289  -2.094  1.00  0.00              
ATOM    114  CA  LYS    99     -16.441  35.879  -0.824  1.00  0.00              
ATOM    115  C   LYS    99     -15.400  36.843  -0.263  1.00  0.00              
ATOM    116  O   LYS    99     -15.564  37.351   0.849  1.00  0.00              
ATOM    117  N   ASN   100     -14.345  37.107  -1.035  1.00  0.00              
ATOM    118  CA  ASN   100     -13.259  37.989  -0.603  1.00  0.00              
ATOM    119  C   ASN   100     -12.647  37.485   0.694  1.00  0.00              
ATOM    120  O   ASN   100     -12.163  38.262   1.512  1.00  0.00              
ATOM    121  N   TYR   101     -12.685  36.170   0.866  1.00  0.00              
ATOM    122  CA  TYR   101     -12.160  35.516   2.048  1.00  0.00              
ATOM    123  C   TYR   101     -10.729  35.015   1.825  1.00  0.00              
ATOM    124  O   TYR   101     -10.418  33.844   2.057  1.00  0.00              
ATOM    125  N   PHE   102      -9.863  35.910   1.358  1.00  0.00              
ATOM    126  CA  PHE   102      -8.457  35.585   1.112  1.00  0.00              
ATOM    127  C   PHE   102      -7.599  36.822   1.346  1.00  0.00              
ATOM    128  O   PHE   102      -8.112  37.934   1.465  1.00  0.00              
ATOM    129  N   ASP   103      -6.289  36.619   1.428  1.00  0.00              
ATOM    130  CA  ASP   103      -5.361  37.716   1.652  1.00  0.00              
ATOM    131  C   ASP   103      -5.329  38.623   0.441  1.00  0.00              
ATOM    132  O   ASP   103      -5.494  38.176  -0.690  1.00  0.00              
ATOM    133  N   VAL   104      -5.099  39.902   0.688  1.00  0.00              
ATOM    134  CA  VAL   104      -5.033  40.881  -0.376  1.00  0.00              
ATOM    135  C   VAL   104      -4.101  40.431  -1.494  1.00  0.00              
ATOM    136  O   VAL   104      -4.406  40.609  -2.665  1.00  0.00              
ATOM    137  N   PRO   105      -2.979  39.826  -1.120  1.00  0.00              
ATOM    138  CA  PRO   105      -2.002  39.350  -2.091  1.00  0.00              
ATOM    139  C   PRO   105      -2.549  38.213  -2.934  1.00  0.00              
ATOM    140  O   PRO   105      -2.440  38.228  -4.154  1.00  0.00              
ATOM    141  N   PRO   106      -3.142  37.228  -2.274  1.00  0.00              
ATOM    142  CA  PRO   106      -3.690  36.079  -2.969  1.00  0.00              
ATOM    143  C   PRO   106      -4.819  36.548  -3.854  1.00  0.00              
ATOM    144  O   PRO   106      -5.062  35.995  -4.921  1.00  0.00              
ATOM    145  N   HIS   107      -5.500  37.590  -3.408  1.00  0.00              
ATOM    146  CA  HIS   107      -6.600  38.143  -4.170  1.00  0.00              
ATOM    147  C   HIS   107      -6.063  38.795  -5.438  1.00  0.00              
ATOM    148  O   HIS   107      -6.619  38.606  -6.523  1.00  0.00              
ATOM    149  N   LYS   108      -4.951  39.514  -5.302  1.00  0.00              
ATOM    150  CA  LYS   108      -4.327  40.185  -6.435  1.00  0.00              
ATOM    151  C   LYS   108      -3.672  39.185  -7.369  1.00  0.00              
ATOM    152  O   LYS   108      -3.554  39.427  -8.565  1.00  0.00              
ATOM    153  N   TYR   109      -3.250  38.058  -6.816  1.00  0.00              
ATOM    154  CA  TYR   109      -2.609  37.023  -7.604  1.00  0.00              
ATOM    155  C   TYR   109      -3.631  36.268  -8.450  1.00  0.00              
ATOM    156  O   TYR   109      -3.366  35.932  -9.604  1.00  0.00              
END
