PFRMAT SS 
TARGET T0074 
AUTHOR 2234-4819-7150 
REMARK Predictor remarks 
METHOD Secondary structure prediction is based on fold recognition 
METHOD using PSI-BLAST to build matrix from nr sequence database for search on PDB. 
METHOD Fold is based on PDB entry 1ahr.  Secondary structure prediction using 
METHOD several methods suggests the last 20 or so amino acids (not represented 
METHOD in the calmodulin fold) are coil. 
MODEL  1 
P H  1.00 
W H  1.00 
A H  1.00 
V H  1.00 
K H  1.00 
P H  1.00 
E H  1.00 
D H  1.00 
K H  1.00 
A H  1.00 
K H  1.00 
Y H  1.00 
D H  1.00 
A H  1.00 
I H  1.00 
F H  1.00 
D C  1.00 
S C  1.00 
L C  1.00 
S C  1.00 
P C  1.00 
V C  1.00 
N C  1.00 
G C  1.00 
F E  1.00 
L E  1.00 
S E  1.00 
G H  1.00 
D H  1.00 
K H  1.00 
V H  1.00 
K H  1.00 
P H  1.00 
V H  1.00 
L H  1.00 
L H  1.00 
N H  1.00 
S C  1.00 
K C  1.00 
L C  1.00 
P C  1.00 
V H  1.00 
D H  1.00 
I H  1.00 
L H  1.00 
G H  1.00 
R H  1.00 
V H  1.00 
W H  1.00 
E C  1.00 
L C  1.00 
S C  1.00 
D C  1.00 
I C  1.00 
D C  1.00 
H C  1.00 
D C  1.00 
G C  1.00 
M E  1.00 
L E  1.00 
D E  1.00 
R H  1.00 
D H  1.00 
E H  1.00 
F H  1.00 
A H  1.00 
V H  1.00 
A H  1.00 
M H  1.00 
F H  1.00 
L H  1.00 
V H  1.00 
Y H  1.00 
C H  1.00 
A H  1.00 
L C  1.00 
E C  1.00 
K C  1.00 
E C  1.00 
P C  1.00 
V C  1.00 
P C  1.00 
M C  1.00 
S C  1.00 
L C  1.00 
P C  1.00 
P C  1.00 
A C  1.00 
L C  1.00 
V C  1.00 
P C  1.00 
P C  1.00 
S C  1.00 
K C  1.00 
R C  1.00 
K C  1.00 
T C  1.00 
W C  1.00 
END 
