REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0074AL212_5 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : BRYANT 
REMARK  ---------------------------------------------------------- 
TARGET T0074  
REMARK =======================================================================  
AUTHOR 2738-1421-4442  
REMARK Prepared by Anna Panchenko, Aron Marchler-Bauer, and Steve Bryant, NCBI   
REMARK =======================================================================  
METHOD Predictions were made with the potential and alignment model used in   
METHOD CASP1 and CASP2 predictions, as described by Madej et al. in Proteins   
METHOD 23:356-369, 1995. Convergence control has been added to the Gibbs-  
METHOD Sampling alignment model. In addition to contact-based threading   
METHOD potentials, PSSMs summarizing sequence conservation in the family   
METHOD represented by the template structure are used to score threading  
METHOD alignments. Threading "cores" summarizing the conserved substructure   
METHOD in the templates used for models below have been based on structure  
METHOD superpositions generated by VAST (Gibrat et al., Curr Opin Struct  
METHOD Biol 1996 Jun;6(3):377-385 ).  
METHOD The alignments have been calculated with the Gibbs Sampling threading  
METHOD engine (and with alignment constraints derived from sequence comparison,  
METHOD based on manually generated alignments, if PSSMs were not used to  
METHOD score alignments, models 3 and 4). The templates were  
METHOD identified by a sequence database search using BLAST, and in threading   
METHOD database-searches using PSSMs. Models 1 and 2 have been calculated  
METHOD with a weight of 1.0 for the PSSM-based scoring function, models 3  
METHOD and 4 with the contact-based threading potential and alignment   
METHOD constraints, model 5 represents the top hit from the automated  
METHOD threading database search.  
REMARK =======================================================================  
MODEL  5  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 2sas 
ATOM      1  N   LYS   125      22.091  -7.367  31.162  1.00  0.00              
ATOM      2  CA  LYS   125      23.540  -7.733  31.002  1.00  0.00              
ATOM      3  C   LYS   125      24.242  -6.439  30.615  1.00  0.00              
ATOM      4  O   LYS   125      23.579  -5.373  30.455  1.00  0.00              
ATOM      5  N   PRO   126      25.539  -6.533  30.417  1.00  0.00              
ATOM      6  CA  PRO   126      26.433  -5.450  30.082  1.00  0.00              
ATOM      7  C   PRO   126      25.909  -4.706  28.823  1.00  0.00              
ATOM      8  O   PRO   126      25.686  -3.507  28.906  1.00  0.00              
ATOM      9  N   GLU   127      25.745  -5.475  27.780  1.00  0.00              
ATOM     10  CA  GLU   127      25.261  -5.078  26.475  1.00  0.00              
ATOM     11  C   GLU   127      23.983  -4.247  26.588  1.00  0.00              
ATOM     12  O   GLU   127      23.894  -3.167  25.987  1.00  0.00              
ATOM     13  N   ASP   128      23.028  -4.804  27.349  1.00  0.00              
ATOM     14  CA  ASP   128      21.774  -4.103  27.549  1.00  0.00              
ATOM     15  C   ASP   128      21.999  -2.721  28.162  1.00  0.00              
ATOM     16  O   ASP   128      21.409  -1.726  27.749  1.00  0.00              
ATOM     17  N   LYS   129      22.837  -2.679  29.187  1.00  0.00              
ATOM     18  CA  LYS   129      23.155  -1.486  29.945  1.00  0.00              
ATOM     19  C   LYS   129      23.904  -0.453  29.124  1.00  0.00              
ATOM     20  O   LYS   129      23.754   0.765  29.396  1.00  0.00              
ATOM     21  N   ALA   130      24.638  -0.950  28.181  1.00  0.00              
ATOM     22  CA  ALA   130      25.430  -0.124  27.240  1.00  0.00              
ATOM     23  C   ALA   130      24.489   0.704  26.349  1.00  0.00              
ATOM     24  O   ALA   130      24.714   1.923  26.158  1.00  0.00              
ATOM     25  N   LYS   131      23.477   0.062  25.821  1.00  0.00              
ATOM     26  CA  LYS   131      22.476   0.629  24.913  1.00  0.00              
ATOM     27  C   LYS   131      21.552   1.510  25.715  1.00  0.00              
ATOM     28  O   LYS   131      21.069   2.507  25.163  1.00  0.00              
ATOM     29  N   TYR   132      21.271   1.125  26.954  1.00  0.00              
ATOM     30  CA  TYR   132      20.444   1.999  27.813  1.00  0.00              
ATOM     31  C   TYR   132      21.212   3.310  28.066  1.00  0.00              
ATOM     32  O   TYR   132      20.694   4.429  27.973  1.00  0.00              
ATOM     33  N   ASP   133      22.488   3.206  28.346  1.00  0.00              
ATOM     34  CA  ASP   133      23.312   4.409  28.556  1.00  0.00              
ATOM     35  C   ASP   133      23.178   5.253  27.279  1.00  0.00              
ATOM     36  O   ASP   133      22.887   6.456  27.325  1.00  0.00              
ATOM     37  N   ALA   134      23.349   4.587  26.127  1.00  0.00              
ATOM     38  CA  ALA   134      23.232   5.205  24.821  1.00  0.00              
ATOM     39  C   ALA   134      22.006   6.072  24.706  1.00  0.00              
ATOM     40  O   ALA   134      22.158   7.245  24.305  1.00  0.00              
ATOM     41  N   ILE   135      20.835   5.583  24.978  1.00  0.00              
ATOM     42  CA  ILE   135      19.601   6.422  24.906  1.00  0.00              
ATOM     43  C   ILE   135      19.576   7.512  25.947  1.00  0.00              
ATOM     44  O   ILE   135      18.976   8.623  25.749  1.00  0.00              
ATOM     45  N   PHE   136      20.172   7.285  27.117  1.00  0.00              
ATOM     46  CA  PHE   136      20.132   8.331  28.180  1.00  0.00              
ATOM     47  C   PHE   136      20.834   9.535  27.559  1.00  0.00              
ATOM     48  O   PHE   136      20.283  10.618  27.402  1.00  0.00              
ATOM     49  N   SER   138      18.225  11.797  25.464  1.00  0.00              
ATOM     50  CA  SER   138      17.512  12.564  26.514  1.00  0.00              
ATOM     51  C   SER   138      18.331  13.644  27.207  1.00  0.00              
ATOM     52  O   SER   138      17.740  14.726  27.371  1.00  0.00              
ATOM     53  N   LEU   139      19.534  13.313  27.586  1.00  0.00              
ATOM     54  CA  LEU   139      20.435  14.228  28.303  1.00  0.00              
ATOM     55  C   LEU   139      21.113  15.143  27.294  1.00  0.00              
ATOM     56  O   LEU   139      22.320  15.053  27.014  1.00  0.00              
ATOM     57  N   SER   140      20.307  16.050  26.759  1.00  0.00              
ATOM     58  CA  SER   140      20.771  17.021  25.725  1.00  0.00              
ATOM     59  C   SER   140      21.910  17.904  26.209  1.00  0.00              
ATOM     60  O   SER   140      22.853  18.109  25.437  1.00  0.00              
ATOM     61  N   PRO   141      21.825  18.364  27.455  1.00  0.00              
ATOM     62  CA  PRO   141      22.854  19.223  28.019  1.00  0.00              
ATOM     63  C   PRO   141      24.014  18.469  28.645  1.00  0.00              
ATOM     64  O   PRO   141      24.823  19.146  29.314  1.00  0.00              
ATOM     65  N   VAL   142      24.051  17.162  28.557  1.00  0.00              
ATOM     66  CA  VAL   142      25.188  16.397  29.097  1.00  0.00              
ATOM     67  C   VAL   142      25.577  16.516  30.523  1.00  0.00              
ATOM     68  O   VAL   142      26.807  16.523  30.836  1.00  0.00              
ATOM     69  N   ASN   143      24.695  16.529  31.506  1.00  0.00              
ATOM     70  CA  ASN   143      25.141  16.637  32.919  1.00  0.00              
ATOM     71  C   ASN   143      24.925  15.381  33.714  1.00  0.00              
ATOM     72  O   ASN   143      25.135  15.355  34.947  1.00  0.00              
ATOM     73  N   GLY   144      24.535  14.262  33.088  1.00  0.00              
ATOM     74  CA  GLY   144      24.346  12.992  33.741  1.00  0.00              
ATOM     75  C   GLY   144      22.993  12.838  34.394  1.00  0.00              
ATOM     76  O   GLY   144      22.803  11.882  35.183  1.00  0.00              
ATOM     77  N   PHE   145      22.115  13.783  34.097  1.00  0.00              
ATOM     78  CA  PHE   145      20.755  13.819  34.647  1.00  0.00              
ATOM     79  C   PHE   145      19.819  14.327  33.514  1.00  0.00              
ATOM     80  O   PHE   145      20.277  15.173  32.759  1.00  0.00              
ATOM     81  N   LEU   146      18.623  13.815  33.573  1.00  0.00              
ATOM     82  CA  LEU   146      17.506  14.157  32.730  1.00  0.00              
ATOM     83  C   LEU   146      16.722  15.185  33.624  1.00  0.00              
ATOM     84  O   LEU   146      16.496  14.833  34.785  1.00  0.00              
ATOM     85  N   SER   147      16.354  16.296  33.052  1.00  0.00              
ATOM     86  CA  SER   147      15.603  17.344  33.797  1.00  0.00              
ATOM     87  C   SER   147      14.833  18.170  32.782  1.00  0.00              
ATOM     88  O   SER   147      15.326  18.022  31.645  1.00  0.00              
ATOM     89  N   GLY   148      13.822  18.924  33.130  1.00  0.00              
ATOM     90  CA  GLY   148      13.105  19.754  32.158  1.00  0.00              
ATOM     91  C   GLY   148      14.077  20.509  31.253  1.00  0.00              
ATOM     92  O   GLY   148      13.833  20.608  30.056  1.00  0.00              
ATOM     93  N   ASP   149      15.174  21.027  31.765  1.00  0.00              
ATOM     94  CA  ASP   149      16.083  21.783  30.921  1.00  0.00              
ATOM     95  C   ASP   149      16.574  20.989  29.707  1.00  0.00              
ATOM     96  O   ASP   149      16.972  21.641  28.702  1.00  0.00              
ATOM     97  N   LYS   150      16.634  19.699  29.803  1.00  0.00              
ATOM     98  CA  LYS   150      17.082  18.815  28.706  1.00  0.00              
ATOM     99  C   LYS   150      15.998  18.942  27.591  1.00  0.00              
ATOM    100  O   LYS   150      16.388  19.127  26.437  1.00  0.00              
ATOM    101  N   VAL   151      14.771  18.867  28.008  1.00  0.00              
ATOM    102  CA  VAL   151      13.603  19.014  27.135  1.00  0.00              
ATOM    103  C   VAL   151      13.531  20.419  26.534  1.00  0.00              
ATOM    104  O   VAL   151      13.126  20.597  25.361  1.00  0.00              
ATOM    105  N   LYS   152      13.898  21.469  27.265  1.00  0.00              
ATOM    106  CA  LYS   152      13.905  22.840  26.726  1.00  0.00              
ATOM    107  C   LYS   152      14.957  22.880  25.602  1.00  0.00              
ATOM    108  O   LYS   152      14.816  23.576  24.583  1.00  0.00              
ATOM    109  N   LEU   156       2.597  23.264  20.126  1.00  0.00              
ATOM    110  CA  LEU   156       2.139  21.860  20.200  1.00  0.00              
ATOM    111  C   LEU   156       3.291  20.958  20.588  1.00  0.00              
ATOM    112  O   LEU   156       3.137  20.090  21.443  1.00  0.00              
ATOM    113  N   ASN   157       4.395  21.170  19.908  1.00  0.00              
ATOM    114  CA  ASN   157       5.627  20.380  20.135  1.00  0.00              
ATOM    115  C   ASN   157       6.024  20.412  21.616  1.00  0.00              
ATOM    116  O   ASN   157       6.419  19.438  22.262  1.00  0.00              
ATOM    117  N   SER   158       5.907  21.582  22.175  1.00  0.00              
ATOM    118  CA  SER   158       6.245  21.833  23.580  1.00  0.00              
ATOM    119  C   SER   158       5.342  21.036  24.525  1.00  0.00              
ATOM    120  O   SER   158       5.903  20.417  25.431  1.00  0.00              
ATOM    121  N   LYS   159       4.040  21.031  24.269  1.00  0.00              
ATOM    122  CA  LYS   159       3.039  20.334  25.008  1.00  0.00              
ATOM    123  C   LYS   159       3.324  18.826  25.006  1.00  0.00              
ATOM    124  O   LYS   159       3.191  18.168  26.064  1.00  0.00              
ATOM    125  N   LEU   160       3.774  18.291  23.873  1.00  0.00              
ATOM    126  CA  LEU   160       4.094  16.854  23.836  1.00  0.00              
ATOM    127  C   LEU   160       5.384  16.585  24.592  1.00  0.00              
ATOM    128  O   LEU   160       5.513  15.452  25.101  1.00  0.00              
ATOM    129  N   PRO   161       6.283  17.535  24.692  1.00  0.00              
ATOM    130  CA  PRO   161       7.542  17.352  25.446  1.00  0.00              
ATOM    131  C   PRO   161       7.244  17.435  26.954  1.00  0.00              
ATOM    132  O   PRO   161       7.791  16.731  27.818  1.00  0.00              
ATOM    133  N   VAL   162       6.378  18.388  27.296  1.00  0.00              
ATOM    134  CA  VAL   162       5.981  18.597  28.699  1.00  0.00              
ATOM    135  C   VAL   162       5.357  17.316  29.250  1.00  0.00              
ATOM    136  O   VAL   162       5.688  16.806  30.319  1.00  0.00              
ATOM    137  N   ASP   163       4.451  16.836  28.472  1.00  0.00              
ATOM    138  CA  ASP   163       3.663  15.620  28.618  1.00  0.00              
ATOM    139  C   ASP   163       4.625  14.425  28.624  1.00  0.00              
ATOM    140  O   ASP   163       4.449  13.425  29.322  1.00  0.00              
ATOM    141  N   ILE   164       5.697  14.495  27.846  1.00  0.00              
ATOM    142  CA  ILE   164       6.688  13.418  27.850  1.00  0.00              
ATOM    143  C   ILE   164       7.454  13.467  29.184  1.00  0.00              
ATOM    144  O   ILE   164       7.473  12.427  29.943  1.00  0.00              
ATOM    145  N   LEU   165       8.022  14.576  29.540  1.00  0.00              
ATOM    146  CA  LEU   165       8.776  14.762  30.781  1.00  0.00              
ATOM    147  C   LEU   165       7.959  14.301  32.007  1.00  0.00              
ATOM    148  O   LEU   165       8.437  13.625  32.923  1.00  0.00              
ATOM    149  N   GLY   166       6.700  14.710  31.995  1.00  0.00              
ATOM    150  CA  GLY   166       5.736  14.377  33.037  1.00  0.00              
ATOM    151  C   GLY   166       5.636  12.871  33.192  1.00  0.00              
ATOM    152  O   GLY   166       5.694  12.351  34.311  1.00  0.00              
ATOM    153  N   ARG   167       5.490  12.155  32.098  1.00  0.00              
ATOM    154  CA  ARG   167       5.368  10.683  32.187  1.00  0.00              
ATOM    155  C   ARG   167       6.702  10.076  32.589  1.00  0.00              
ATOM    156  O   ARG   167       6.650   9.034  33.290  1.00  0.00              
ATOM    157  N   VAL   168       7.817  10.631  32.148  1.00  0.00              
ATOM    158  CA  VAL   168       9.101  10.029  32.546  1.00  0.00              
ATOM    159  C   VAL   168       9.321  10.305  34.048  1.00  0.00              
ATOM    160  O   VAL   168       9.589   9.331  34.782  1.00  0.00              
ATOM    161  N   TRP   169       9.267  11.573  34.416  1.00  0.00              
ATOM    162  CA  TRP   169       9.437  12.021  35.808  1.00  0.00              
ATOM    163  C   TRP   169       8.577  11.191  36.764  1.00  0.00              
ATOM    164  O   TRP   169       9.059  10.712  37.806  1.00  0.00              
ATOM    165  N   GLU   170       7.322  11.026  36.464  1.00  0.00              
ATOM    166  CA  GLU   170       6.377  10.260  37.291  1.00  0.00              
ATOM    167  C   GLU   170       6.591   8.779  37.370  1.00  0.00              
ATOM    168  O   GLU   170       5.896   8.044  38.101  1.00  0.00              
ATOM    169  N   LEU   171       7.538   8.228  36.643  1.00  0.00              
ATOM    170  CA  LEU   171       7.840   6.805  36.612  1.00  0.00              
ATOM    171  C   LEU   171       9.240   6.459  37.116  1.00  0.00              
ATOM    172  O   LEU   171       9.459   5.320  37.595  1.00  0.00              
ATOM    173  N   SER   172      10.143   7.380  36.924  1.00  0.00              
ATOM    174  CA  SER   172      11.542   7.116  37.259  1.00  0.00              
ATOM    175  C   SER   172      12.053   7.948  38.395  1.00  0.00              
ATOM    176  O   SER   172      13.035   7.508  38.983  1.00  0.00              
ATOM    177  N   ASP   173      11.397   9.065  38.683  1.00  0.00              
ATOM    178  CA  ASP   173      11.900   9.891  39.791  1.00  0.00              
ATOM    179  C   ASP   173      11.385   9.322  41.141  1.00  0.00              
ATOM    180  O   ASP   173      10.371   9.804  41.680  1.00  0.00              
ATOM    181  N   ILE   174      12.154   8.387  41.637  1.00  0.00              
ATOM    182  CA  ILE   174      11.803   7.731  42.893  1.00  0.00              
ATOM    183  C   ILE   174      11.789   8.637  44.110  1.00  0.00              
ATOM    184  O   ILE   174      10.796   8.487  44.869  1.00  0.00              
ATOM    185  N   ASP   175      12.739   9.526  44.330  1.00  0.00              
ATOM    186  CA  ASP   175      12.791  10.430  45.470  1.00  0.00              
ATOM    187  C   ASP   175      12.191  11.815  45.233  1.00  0.00              
ATOM    188  O   ASP   175      12.597  12.753  45.973  1.00  0.00              
ATOM    189  N   HIS   176      11.335  12.001  44.283  1.00  0.00              
ATOM    190  CA  HIS   176      10.675  13.232  43.972  1.00  0.00              
ATOM    191  C   HIS   176      11.401  14.551  43.934  1.00  0.00              
ATOM    192  O   HIS   176      10.742  15.560  44.321  1.00  0.00              
ATOM    193  N   ASP   177      12.586  14.662  43.409  1.00  0.00              
ATOM    194  CA  ASP   177      13.364  15.871  43.228  1.00  0.00              
ATOM    195  C   ASP   177      13.401  16.370  41.771  1.00  0.00              
ATOM    196  O   ASP   177      14.426  17.002  41.429  1.00  0.00              
ATOM    197  N   GLY   178      12.456  16.101  40.918  1.00  0.00              
ATOM    198  CA  GLY   178      12.380  16.523  39.514  1.00  0.00              
ATOM    199  C   GLY   178      13.618  16.324  38.666  1.00  0.00              
ATOM    200  O   GLY   178      13.836  17.052  37.654  1.00  0.00              
ATOM    201  N   MET   179      14.468  15.426  39.050  1.00  0.00              
ATOM    202  CA  MET   179      15.696  15.097  38.300  1.00  0.00              
ATOM    203  C   MET   179      15.628  13.575  38.097  1.00  0.00              
ATOM    204  O   MET   179      15.306  12.894  39.105  1.00  0.00              
ATOM    205  N   LEU   180      15.834  13.089  36.881  1.00  0.00              
ATOM    206  CA  LEU   180      15.853  11.622  36.712  1.00  0.00              
ATOM    207  C   LEU   180      17.364  11.324  36.611  1.00  0.00              
ATOM    208  O   LEU   180      18.040  11.887  35.721  1.00  0.00              
ATOM    209  N   ASP   181      17.903  10.517  37.523  1.00  0.00              
ATOM    210  CA  ASP   181      19.366  10.261  37.356  1.00  0.00              
ATOM    211  C   ASP   181      19.501   9.013  36.502  1.00  0.00              
ATOM    212  O   ASP   181      18.487   8.348  36.202  1.00  0.00              
ATOM    213  N   ARG   182      20.714   8.708  36.165  1.00  0.00              
ATOM    214  CA  ARG   182      21.106   7.509  35.409  1.00  0.00              
ATOM    215  C   ARG   182      20.595   6.256  36.127  1.00  0.00              
ATOM    216  O   ARG   182      19.946   5.406  35.514  1.00  0.00              
ATOM    217  N   ASP   183      20.935   6.166  37.403  1.00  0.00              
ATOM    218  CA  ASP   183      20.487   5.071  38.280  1.00  0.00              
ATOM    219  C   ASP   183      18.980   4.940  38.282  1.00  0.00              
ATOM    220  O   ASP   183      18.455   3.808  38.120  1.00  0.00              
ATOM    221  N   GLU   184      18.204   6.006  38.422  1.00  0.00              
ATOM    222  CA  GLU   184      16.740   5.844  38.381  1.00  0.00              
ATOM    223  C   GLU   184      16.271   5.454  36.980  1.00  0.00              
ATOM    224  O   GLU   184      15.321   4.651  36.848  1.00  0.00              
ATOM    225  N   PHE   185      16.921   5.986  35.967  1.00  0.00              
ATOM    226  CA  PHE   185      16.637   5.673  34.568  1.00  0.00              
ATOM    227  C   PHE   185      16.982   4.197  34.308  1.00  0.00              
ATOM    228  O   PHE   185      16.227   3.528  33.538  1.00  0.00              
ATOM    229  N   ALA   186      18.052   3.723  34.927  1.00  0.00              
ATOM    230  CA  ALA   186      18.446   2.270  34.744  1.00  0.00              
ATOM    231  C   ALA   186      17.328   1.432  35.367  1.00  0.00              
ATOM    232  O   ALA   186      16.708   0.562  34.742  1.00  0.00              
ATOM    233  N   VAL   187      17.027   1.738  36.625  1.00  0.00              
ATOM    234  CA  VAL   187      15.947   1.107  37.396  1.00  0.00              
ATOM    235  C   VAL   187      14.675   1.053  36.620  1.00  0.00              
ATOM    236  O   VAL   187      14.011   0.004  36.624  1.00  0.00              
ATOM    237  N   ALA   188      14.260   2.137  35.984  1.00  0.00              
ATOM    238  CA  ALA   188      13.037   2.182  35.170  1.00  0.00              
ATOM    239  C   ALA   188      13.138   1.130  34.056  1.00  0.00              
ATOM    240  O   ALA   188      12.192   0.363  33.812  1.00  0.00              
ATOM    241  N   MET   189      14.274   1.073  33.418  1.00  0.00              
ATOM    242  CA  MET   189      14.456   0.082  32.318  1.00  0.00              
ATOM    243  C   MET   189      14.490  -1.349  32.786  1.00  0.00              
ATOM    244  O   MET   189      13.896  -2.219  32.097  1.00  0.00              
END
