REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0074AL019_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : UCSC-COMPBIO 
REMARK  ---------------------------------------------------------- 
TARGET T0074  
AUTHOR 9070-5088-8627  
METHOD Overview  
METHOD   
METHOD Fold recognition was performed using the Target98 (SAM-T98) method  
METHOD [3] using SAM version 2.1.1 [1], a refinement of the methods developed  
METHOD by this group for CASP2 [2].  This method attempts to find and multiply   
METHOD align a set of homologs to a given sequence, then create an HMM from that   
METHOD multiple alignment.  
METHOD   
METHOD First, a set of sequence weights is determined from the alignment.  Next,   
METHOD Modelfromalign is used to build the model from the alignment and the   
METHOD sequence weights.  Finally, hmmscore performs a local, all-paths scoring   
METHOD of the sequences, using a reversed-sequence normalization feature.  
METHOD   
METHOD The weighting method, detailed in upcoming publications [3,4],  
METHOD combines the Henikoffs' scheme [5], Dirichlet mixtures [6], and an  
METHOD entropy method to set the final weights.  
METHOD   
METHOD Alignment generation  
METHOD   
METHOD The initial step uses BLASTP to search NRP twice: once to produce a set  
METHOD of very close homologs, and once to produce a set of possible homologs.  
METHOD   
METHOD The method then uses multiple iterations of a selection, training, and   
METHOD alignment procedure.  Each iteration involves an initial alignment, a set   
METHOD of search sequences, a threshold value, and a transition regularizer.   
METHOD   
METHOD The first iteration uses a single sequence (or seed alignment) as the   
METHOD initial alignment and the close homologs found by BLASTP are used as the   
METHOD search set.  The threshold is set very strictly, so that only good matches   
METHOD to the sequence are considered.  This iteration uses a transition regularizer   
METHOD that was designed to match the gap costs used by BLASTP.  
METHOD   
METHOD On subsequent iterations the input alignment is the output from the  
METHOD previous iteration, the search set is the larger set of possible  
METHOD homologs found by BLASTP, and the thresholds are gradually loosened.  
METHOD The second through second-from-last iteration use a ``long-match''  
METHOD transition regularizer, and the final iteration uses a transition regularizer   
METHOD trained on FSSP alignments.  
METHOD   
METHOD References  
METHOD [1] R. Hughey and A. Krogh, CABIOS 12(2): 95-107, 1996.  
METHOD     http://www.cse.ucsc.edu/research/compbio/sam.html.    
METHOD [2] K. Karplus, K. Sjolander, C. Barrett, M. Cline, D. Haussler, R.  
METHOD     Hughey, L. Holm, and C. Sander, Proteins: Structure, Function, and   
METHOD     Genetics, Suppl. 1, 134-9, 1997.  
METHOD [3] K. Karplus, C. Barrett, and R. Hughey, Technical Report UCSC-CRL-98-06,  
METHOD     Department of Computer Engineering, Univ. of California, Santa Cruz, 1998.  
METHOD [4] J. Park, K. Karplus, C. Barrett, R. Hughey, D. Haussler, T. Hubbard,  
METHOD     and C. Chothia, http://cyrah.med.harvard.edu/~jong/assess_final.html, 1998.  
METHOD [5] S. Henikoff and J. C. Henikoff, JMB, vol 243, pp 574-578, Nov 1994.  
METHOD [6] K. Sjolander, K. Karplus, M. P. Brown, R. Hughey, A. Krogh, I. S.  
METHOD    Mian, and D. Haussler, CABIOS 12(4):327-345, 1996.  
METHOD   
METHOD   
METHOD All methods (wu-blast, double-blast, target HMM, library HMMs) scored  
METHOD the EF-hand domains fairly well, and the submission included the  
METHOD information that this contained a calcium-binding site, so we were  
METHOD confident that it was an EF-hand domain.  The big decision was between  
METHOD calmodulin-like and calbindin-like domains.  
METHOD   
METHOD In addition to using the specified domain, we tried a longer section  
METHOD of EP15_HUMAN that included the earlier EF-hand domain as well, in the  
METHOD hope that this would give us greater discrimination.  We also used an  
METHOD earlier (fourth) iteration of the target alignment building process  
METHOD than usual, since almost all the EF-hands were included in the  
METHOD alignment by the sixth iteration.  Since the calmodulin domains  
METHOD usually occur in pairs, this change made the calmodulins score better  
METHOD than the calbindins.  
METHOD   
METHOD The 2scpA library model scored the longer 2-domain sequence best  
METHOD (-28.36, in the region where we had fewer than 1% false positives in  
METHOD our superfamily fold-recognition tests).    
METHOD   
METHOD We then considered conservation patterns, the gaps,  and the  
METHOD insertions in various alignments to the calbindins and calmodulins.  
METHOD One alignment to 1osa had high residue conservation, but had a large  
METHOD insertion in the first binding pocket and a gap between the helices  
METHOD between the binding pockets.  One alignment to 5icb also had high  
METHOD residue identity, but needed 2 gaps on either side of the helix that  
METHOD distinguishes calbindins from calmodulins---making the calbindin  
METHOD hypothesis less likely.  
METHOD   
METHOD The first binding pocket probably does not bind calcium (it is  
METHOD disrupted in all our alignments), but the second pocket is highly  
METHOD conserved, so probably retains Ca-binding.  
METHOD   
METHOD We finally chose a 2scpA alignment that had an insertion in the first  
METHOD binding pocket and reasonably good conservation for the rest.  The  
METHOD placement of the first helix is somewhat arbitrary---the 2-residue  
METHOD insert could have been a 1-residue gap or a 6-residue insert just as  
METHOD easily.   
METHOD   
MODEL 1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 2scp_A 
ATOM      1  N   PRO   121      20.637  19.365  14.641  1.00  0.00              
ATOM      2  CA  PRO   121      21.774  19.123  15.540  1.00  0.00              
ATOM      3  C   PRO   121      23.052  18.717  14.799  1.00  0.00              
ATOM      4  O   PRO   121      23.889  18.005  15.410  1.00  0.00              
ATOM      5  N   TRP   122      23.242  19.155  13.586  1.00  0.00              
ATOM      6  CA  TRP   122      24.362  18.800  12.722  1.00  0.00              
ATOM      7  C   TRP   122      25.745  19.068  13.311  1.00  0.00              
ATOM      8  O   TRP   122      26.686  18.357  12.959  1.00  0.00              
ATOM      9  N   ALA   123      25.779  20.129  14.114  1.00  0.00              
ATOM     10  CA  ALA   123      27.066  20.554  14.718  1.00  0.00              
ATOM     11  C   ALA   123      27.638  19.523  15.648  1.00  0.00              
ATOM     12  O   ALA   123      28.848  19.584  16.004  1.00  0.00              
ATOM     13  N   VAL   124      26.805  18.534  16.040  1.00  0.00              
ATOM     14  CA  VAL   124      27.328  17.472  16.913  1.00  0.00              
ATOM     15  C   VAL   124      28.179  16.540  16.033  1.00  0.00              
ATOM     16  O   VAL   124      29.095  15.926  16.547  1.00  0.00              
ATOM     17  N   LYS   125      27.861  16.455  14.763  1.00  0.00              
ATOM     18  CA  LYS   125      28.603  15.612  13.809  1.00  0.00              
ATOM     19  C   LYS   125      29.730  16.455  13.148  1.00  0.00              
ATOM     20  O   LYS   125      30.832  15.959  12.860  1.00  0.00              
ATOM     21  N   PRO   126      29.390  17.714  12.901  1.00  0.00              
ATOM     22  CA  PRO   126      30.282  18.640  12.219  1.00  0.00              
ATOM     23  C   PRO   126      31.321  19.306  13.088  1.00  0.00              
ATOM     24  O   PRO   126      32.359  19.727  12.526  1.00  0.00              
ATOM     25  N   GLU   127      31.057  19.411  14.372  1.00  0.00              
ATOM     26  CA  GLU   127      31.883  19.987  15.411  1.00  0.00              
ATOM     27  C   GLU   127      33.378  19.736  15.375  1.00  0.00              
ATOM     28  O   GLU   127      34.149  20.686  15.607  1.00  0.00              
ATOM     29  N   ASP   128      33.812  18.497  15.106  1.00  0.00              
ATOM     30  CA  ASP   128      35.209  18.168  15.027  1.00  0.00              
ATOM     31  C   ASP   128      35.942  18.807  13.828  1.00  0.00              
ATOM     32  O   ASP   128      37.202  18.686  13.878  1.00  0.00              
ATOM     33  N   LYS   129      35.254  19.267  12.805  1.00  0.00              
ATOM     34  CA  LYS   129      36.032  19.775  11.622  1.00  0.00              
ATOM     35  C   LYS   129      37.024  20.870  11.970  1.00  0.00              
ATOM     36  O   LYS   129      38.170  20.871  11.480  1.00  0.00              
ATOM     37  N   ALA   130      36.585  21.894  12.702  1.00  0.00              
ATOM     38  CA  ALA   130      37.413  23.018  13.109  1.00  0.00              
ATOM     39  C   ALA   130      38.594  22.582  13.960  1.00  0.00              
ATOM     40  O   ALA   130      39.675  23.214  13.874  1.00  0.00              
ATOM     41  N   LYS   131      38.386  21.517  14.743  1.00  0.00              
ATOM     42  CA  LYS   131      39.527  20.999  15.539  1.00  0.00              
ATOM     43  C   LYS   131      40.528  20.365  14.590  1.00  0.00              
ATOM     44  O   LYS   131      41.733  20.584  14.708  1.00  0.00              
ATOM     45  N   TYR   132      40.041  19.602  13.611  1.00  0.00              
ATOM     46  CA  TYR   132      40.976  18.952  12.634  1.00  0.00              
ATOM     47  C   TYR   132      41.758  20.058  11.889  1.00  0.00              
ATOM     48  O   TYR   132      42.964  19.952  11.694  1.00  0.00              
ATOM     49  N   ASP   133      40.978  21.087  11.555  1.00  0.00              
ATOM     50  CA  ASP   133      41.552  22.231  10.827  1.00  0.00              
ATOM     51  C   ASP   133      42.681  22.863  11.652  1.00  0.00              
ATOM     52  O   ASP   133      43.781  23.131  11.118  1.00  0.00              
ATOM     53  N   ALA   134      42.397  23.141  12.894  1.00  0.00              
ATOM     54  CA  ALA   134      43.400  23.806  13.777  1.00  0.00              
ATOM     55  C   ALA   134      44.681  22.971  13.869  1.00  0.00              
ATOM     56  O   ALA   134      45.828  23.446  13.850  1.00  0.00              
ATOM     57  N   ILE   135      44.519  21.663  14.038  1.00  0.00              
ATOM     58  CA  ILE   135      45.724  20.787  14.147  1.00  0.00              
ATOM     59  C   ILE   135      46.502  20.827  12.861  1.00  0.00              
ATOM     60  O   ILE   135      47.765  20.924  12.874  1.00  0.00              
ATOM     61  N   PHE   136      45.833  20.757  11.700  1.00  0.00              
ATOM     62  CA  PHE   136      46.528  20.713  10.410  1.00  0.00              
ATOM     63  C   PHE   136      47.224  22.000   9.987  1.00  0.00              
ATOM     64  O   PHE   136      48.177  21.931   9.163  1.00  0.00              
ATOM     65  N   ASP   137      46.779  23.138  10.453  1.00  0.00              
ATOM     66  CA  ASP   137      47.355  24.471  10.165  1.00  0.00              
ATOM     67  C   ASP   137      48.631  24.667  11.025  1.00  0.00              
ATOM     68  O   ASP   137      48.624  25.383  12.045  1.00  0.00              
ATOM     69  N   SER   138      49.663  23.950  10.644  1.00  0.00              
ATOM     70  CA  SER   138      50.886  23.970  11.462  1.00  0.00              
ATOM     71  C   SER   138      51.605  25.282  11.486  1.00  0.00              
ATOM     72  O   SER   138      52.394  25.510  12.446  1.00  0.00              
ATOM     73  N   LEU   139      51.422  26.142  10.509  1.00  0.00              
ATOM     74  CA  LEU   139      52.110  27.467  10.568  1.00  0.00              
ATOM     75  C   LEU   139      51.125  28.477  11.147  1.00  0.00              
ATOM     76  O   LEU   139      51.467  29.675  11.145  1.00  0.00              
ATOM     77  N   SER   140      49.946  28.022  11.555  1.00  0.00              
ATOM     78  CA  SER   140      48.891  28.855  12.141  1.00  0.00              
ATOM     79  C   SER   140      48.555  30.134  11.427  1.00  0.00              
ATOM     80  O   SER   140      48.288  31.225  12.016  1.00  0.00              
ATOM     81  N   ASN   143      48.485  30.064  10.105  1.00  0.00              
ATOM     82  CA  ASN   143      48.155  31.267   9.315  1.00  0.00              
ATOM     83  C   ASN   143      46.678  31.236   9.030  1.00  0.00              
ATOM     84  O   ASN   143      46.233  32.098   8.291  1.00  0.00              
ATOM     85  N   GLY   144      45.932  30.267   9.561  1.00  0.00              
ATOM     86  CA  GLY   144      44.501  30.176   9.343  1.00  0.00              
ATOM     87  C   GLY   144      44.055  29.644   8.006  1.00  0.00              
ATOM     88  O   GLY   144      42.843  29.776   7.664  1.00  0.00              
ATOM     89  N   PHE   145      44.929  29.084   7.214  1.00  0.00              
ATOM     90  CA  PHE   145      44.606  28.512   5.911  1.00  0.00              
ATOM     91  C   PHE   145      45.393  27.154   5.893  1.00  0.00              
ATOM     92  O   PHE   145      46.428  27.121   6.539  1.00  0.00              
ATOM     93  N   LEU   146      44.903  26.197   5.164  1.00  0.00              
ATOM     94  CA  LEU   146      45.688  24.968   5.005  1.00  0.00              
ATOM     95  C   LEU   146      46.270  25.024   3.586  1.00  0.00              
ATOM     96  O   LEU   146      45.519  25.198   2.606  1.00  0.00              
ATOM     97  N   SER   147      47.593  24.913   3.535  1.00  0.00              
ATOM     98  CA  SER   147      48.309  24.912   2.254  1.00  0.00              
ATOM     99  C   SER   147      48.446  23.459   1.787  1.00  0.00              
ATOM    100  O   SER   147      48.183  22.480   2.557  1.00  0.00              
ATOM    101  N   GLY   148      48.803  23.340   0.537  1.00  0.00              
ATOM    102  CA  GLY   148      49.035  22.042  -0.112  1.00  0.00              
ATOM    103  C   GLY   148      50.016  21.216   0.705  1.00  0.00              
ATOM    104  O   GLY   148      49.713  20.026   0.923  1.00  0.00              
ATOM    105  N   ASP   149      51.129  21.825   1.130  1.00  0.00              
ATOM    106  CA  ASP   149      52.110  21.073   1.942  1.00  0.00              
ATOM    107  C   ASP   149      51.498  20.578   3.234  1.00  0.00              
ATOM    108  O   ASP   149      51.752  19.423   3.650  1.00  0.00              
ATOM    109  N   LYS   150      50.775  21.447   3.932  1.00  0.00              
ATOM    110  CA  LYS   150      50.124  21.066   5.213  1.00  0.00              
ATOM    111  C   LYS   150      49.126  19.953   4.982  1.00  0.00              
ATOM    112  O   LYS   150      49.068  18.971   5.767  1.00  0.00              
ATOM    113  N   VAL   151      48.370  20.026   3.905  1.00  0.00              
ATOM    114  CA  VAL   151      47.384  18.977   3.596  1.00  0.00              
ATOM    115  C   VAL   151      48.049  17.630   3.304  1.00  0.00              
ATOM    116  O   VAL   151      47.577  16.576   3.757  1.00  0.00              
ATOM    117  N   LYS   152      49.120  17.673   2.514  1.00  0.00              
ATOM    118  CA  LYS   152      49.914  16.500   2.146  1.00  0.00              
ATOM    119  C   LYS   152      50.430  15.795   3.396  1.00  0.00              
ATOM    120  O   LYS   152      50.373  14.538   3.461  1.00  0.00              
ATOM    121  N   PRO   153      50.909  16.572   4.349  1.00  0.00              
ATOM    122  CA  PRO   153      51.434  16.079   5.620  1.00  0.00              
ATOM    123  C   PRO   153      50.320  15.407   6.420  1.00  0.00              
ATOM    124  O   PRO   153      50.563  14.362   7.069  1.00  0.00              
ATOM    125  N   VAL   154      49.134  16.013   6.328  1.00  0.00              
ATOM    126  CA  VAL   154      47.952  15.473   7.020  1.00  0.00              
ATOM    127  C   VAL   154      47.657  14.052   6.457  1.00  0.00              
ATOM    128  O   VAL   154      47.410  13.137   7.242  1.00  0.00              
ATOM    129  N   LEU   155      47.604  13.959   5.148  1.00  0.00              
ATOM    130  CA  LEU   155      47.308  12.642   4.492  1.00  0.00              
ATOM    131  C   LEU   155      48.339  11.623   4.938  1.00  0.00              
ATOM    132  O   LEU   155      48.018  10.428   5.214  1.00  0.00              
ATOM    133  N   LEU   156      49.589  12.080   4.964  1.00  0.00              
ATOM    134  CA  LEU   156      50.708  11.258   5.423  1.00  0.00              
ATOM    135  C   LEU   156      50.577  10.821   6.858  1.00  0.00              
ATOM    136  O   LEU   156      51.073   9.723   7.230  1.00  0.00              
ATOM    137  N   ASN   157      49.973  11.621   7.711  1.00  0.00              
ATOM    138  CA  ASN   157      49.828  11.261   9.131  1.00  0.00              
ATOM    139  C   ASN   157      48.778  10.130   9.222  1.00  0.00              
ATOM    140  O   ASN   157      48.933   9.287  10.096  1.00  0.00              
ATOM    141  N   SER   158      47.776  10.188   8.365  1.00  0.00              
ATOM    142  CA  SER   158      46.735   9.153   8.290  1.00  0.00              
ATOM    143  C   SER   158      47.260   7.868   7.620  1.00  0.00              
ATOM    144  O   SER   158      46.456   6.934   7.431  1.00  0.00              
ATOM    145  N   LYS   159      48.515   7.801   7.278  1.00  0.00              
ATOM    146  CA  LYS   159      49.108   6.597   6.642  1.00  0.00              
ATOM    147  C   LYS   159      48.859   6.557   5.144  1.00  0.00              
ATOM    148  O   LYS   159      49.204   5.573   4.466  1.00  0.00              
ATOM    149  N   LEU   160      48.237   7.571   4.572  1.00  0.00              
ATOM    150  CA  LEU   160      47.958   7.606   3.125  1.00  0.00              
ATOM    151  C   LEU   160      49.125   8.133   2.287  1.00  0.00              
ATOM    152  O   LEU   160      49.944   8.936   2.755  1.00  0.00              
ATOM    153  N   PRO   161      49.136   7.639   1.063  1.00  0.00              
ATOM    154  CA  PRO   161      50.107   8.027   0.036  1.00  0.00              
ATOM    155  C   PRO   161      49.812   9.477  -0.347  1.00  0.00              
ATOM    156  O   PRO   161      48.685   9.802  -0.757  1.00  0.00              
ATOM    157  N   VAL   162      50.854  10.296  -0.191  1.00  0.00              
ATOM    158  CA  VAL   162      50.772  11.753  -0.409  1.00  0.00              
ATOM    159  C   VAL   162      50.310  12.082  -1.806  1.00  0.00              
ATOM    160  O   VAL   162      49.808  13.208  -2.028  1.00  0.00              
ATOM    161  N   ASP   163      50.462  11.112  -2.689  1.00  0.00              
ATOM    162  CA  ASP   163      50.040  11.345  -4.076  1.00  0.00              
ATOM    163  C   ASP   163      48.537  11.305  -4.163  1.00  0.00              
ATOM    164  O   ASP   163      48.002  11.662  -5.217  1.00  0.00              
ATOM    165  N   ILE   164      47.818  10.918  -3.130  1.00  0.00              
ATOM    166  CA  ILE   164      46.350  10.924  -3.160  1.00  0.00              
ATOM    167  C   ILE   164      45.800  12.276  -2.648  1.00  0.00              
ATOM    168  O   ILE   164      44.582  12.527  -2.806  1.00  0.00              
ATOM    169  N   LEU   165      46.671  13.110  -2.098  1.00  0.00              
ATOM    170  CA  LEU   165      46.187  14.388  -1.548  1.00  0.00              
ATOM    171  C   LEU   165      45.575  15.348  -2.520  1.00  0.00              
ATOM    172  O   LEU   165      44.545  15.998  -2.230  1.00  0.00              
ATOM    173  N   GLY   166      46.203  15.564  -3.680  1.00  0.00              
ATOM    174  CA  GLY   166      45.723  16.570  -4.618  1.00  0.00              
ATOM    175  C   GLY   166      44.276  16.438  -4.972  1.00  0.00              
ATOM    176  O   GLY   166      43.570  17.486  -4.955  1.00  0.00              
ATOM    177  N   ARG   167      43.798  15.236  -5.294  1.00  0.00              
ATOM    178  CA  ARG   167      42.372  15.071  -5.678  1.00  0.00              
ATOM    179  C   ARG   167      41.442  15.508  -4.546  1.00  0.00              
ATOM    180  O   ARG   167      40.395  16.091  -4.806  1.00  0.00              
ATOM    181  N   VAL   168      41.823  15.221  -3.303  1.00  0.00              
ATOM    182  CA  VAL   168      40.964  15.606  -2.162  1.00  0.00              
ATOM    183  C   VAL   168      41.090  17.119  -1.930  1.00  0.00              
ATOM    184  O   VAL   168      40.072  17.756  -1.682  1.00  0.00              
ATOM    185  N   TRP   169      42.295  17.646  -1.981  1.00  0.00              
ATOM    186  CA  TRP   169      42.562  19.089  -1.779  1.00  0.00              
ATOM    187  C   TRP   169      41.703  19.891  -2.778  1.00  0.00              
ATOM    188  O   TRP   169      40.994  20.826  -2.405  1.00  0.00              
ATOM    189  N   GLU   170      41.805  19.523  -4.022  1.00  0.00              
ATOM    190  CA  GLU   170      41.156  20.129  -5.177  1.00  0.00              
ATOM    191  C   GLU   170      39.653  20.182  -5.016  1.00  0.00              
ATOM    192  O   GLU   170      39.043  21.212  -5.360  1.00  0.00              
ATOM    193  N   LEU   171      39.069  19.168  -4.438  1.00  0.00              
ATOM    194  CA  LEU   171      37.627  19.131  -4.170  1.00  0.00              
ATOM    195  C   LEU   171      37.223  20.141  -3.116  1.00  0.00              
ATOM    196  O   LEU   171      36.086  20.653  -3.188  1.00  0.00              
ATOM    197  N   SER   172      38.080  20.377  -2.141  1.00  0.00              
ATOM    198  CA  SER   172      37.756  21.308  -1.051  1.00  0.00              
ATOM    199  C   SER   172      38.017  22.757  -1.467  1.00  0.00              
ATOM    200  O   SER   172      37.279  23.651  -1.056  1.00  0.00              
ATOM    201  N   ASP   173      39.052  22.967  -2.271  1.00  0.00              
ATOM    202  CA  ASP   173      39.451  24.311  -2.722  1.00  0.00              
ATOM    203  C   ASP   173      38.495  24.870  -3.794  1.00  0.00              
ATOM    204  O   ASP   173      38.921  25.054  -4.938  1.00  0.00              
ATOM    205  N   ILE   174      37.281  25.251  -3.428  1.00  0.00              
ATOM    206  CA  ILE   174      36.329  25.728  -4.416  1.00  0.00              
ATOM    207  C   ILE   174      36.669  27.033  -5.101  1.00  0.00              
ATOM    208  O   ILE   174      36.083  27.283  -6.208  1.00  0.00              
ATOM    209  N   ASP   175      37.471  27.889  -4.490  1.00  0.00              
ATOM    210  CA  ASP   175      37.804  29.177  -5.155  1.00  0.00              
ATOM    211  C   ASP   175      39.129  29.088  -5.860  1.00  0.00              
ATOM    212  O   ASP   175      39.550  30.122  -6.427  1.00  0.00              
ATOM    213  N   HIS   176      39.772  27.934  -5.807  1.00  0.00              
ATOM    214  CA  HIS   176      40.991  27.675  -6.555  1.00  0.00              
ATOM    215  C   HIS   176      42.154  28.599  -6.229  1.00  0.00              
ATOM    216  O   HIS   176      42.969  28.771  -7.129  1.00  0.00              
ATOM    217  N   ASP   177      42.222  29.151  -5.053  1.00  0.00              
ATOM    218  CA  ASP   177      43.274  30.068  -4.624  1.00  0.00              
ATOM    219  C   ASP   177      44.445  29.264  -4.075  1.00  0.00              
ATOM    220  O   ASP   177      45.392  29.873  -3.603  1.00  0.00              
ATOM    221  N   GLY   178      44.345  27.934  -4.097  1.00  0.00              
ATOM    222  CA  GLY   178      45.452  27.071  -3.659  1.00  0.00              
ATOM    223  C   GLY   178      45.645  26.932  -2.181  1.00  0.00              
ATOM    224  O   GLY   178      46.710  26.444  -1.713  1.00  0.00              
ATOM    225  N   MET   179      44.636  27.293  -1.402  1.00  0.00              
ATOM    226  CA  MET   179      44.628  27.171   0.049  1.00  0.00              
ATOM    227  C   MET   179      43.276  26.631   0.534  1.00  0.00              
ATOM    228  O   MET   179      42.316  26.907  -0.193  1.00  0.00              
ATOM    229  N   LEU   180      43.189  26.055   1.680  1.00  0.00              
ATOM    230  CA  LEU   180      41.895  25.673   2.258  1.00  0.00              
ATOM    231  C   LEU   180      41.573  26.654   3.406  1.00  0.00              
ATOM    232  O   LEU   180      42.310  26.755   4.401  1.00  0.00              
ATOM    233  N   ASP   181      40.460  27.372   3.272  1.00  0.00              
ATOM    234  CA  ASP   181      39.988  28.278   4.349  1.00  0.00              
ATOM    235  C   ASP   181      39.184  27.379   5.328  1.00  0.00              
ATOM    236  O   ASP   181      38.807  26.278   4.921  1.00  0.00              
ATOM    237  N   ARG   182      38.911  27.840   6.541  1.00  0.00              
ATOM    238  CA  ARG   182      38.127  27.071   7.504  1.00  0.00              
ATOM    239  C   ARG   182      36.749  26.764   6.908  1.00  0.00              
ATOM    240  O   ARG   182      36.149  25.710   7.132  1.00  0.00              
ATOM    241  N   ASP   183      36.186  27.773   6.251  1.00  0.00              
ATOM    242  CA  ASP   183      34.897  27.727   5.638  1.00  0.00              
ATOM    243  C   ASP   183      34.881  26.610   4.580  1.00  0.00              
ATOM    244  O   ASP   183      33.975  25.775   4.653  1.00  0.00              
ATOM    245  N   GLU   184      35.804  26.595   3.635  1.00  0.00              
ATOM    246  CA  GLU   184      35.808  25.516   2.611  1.00  0.00              
ATOM    247  C   GLU   184      35.908  24.125   3.216  1.00  0.00              
ATOM    248  O   GLU   184      35.237  23.153   2.746  1.00  0.00              
ATOM    249  N   PHE   185      36.750  24.008   4.206  1.00  0.00              
ATOM    250  CA  PHE   185      37.039  22.751   4.916  1.00  0.00              
ATOM    251  C   PHE   185      35.799  22.216   5.607  1.00  0.00              
ATOM    252  O   PHE   185      35.507  21.011   5.511  1.00  0.00              
ATOM    253  N   ALA   186      35.119  23.086   6.383  1.00  0.00              
ATOM    254  CA  ALA   186      33.922  22.615   7.065  1.00  0.00              
ATOM    255  C   ALA   186      32.782  22.331   6.064  1.00  0.00              
ATOM    256  O   ALA   186      32.002  21.402   6.322  1.00  0.00              
ATOM    257  N   VAL   187      32.649  23.139   5.008  1.00  0.00              
ATOM    258  CA  VAL   187      31.571  22.895   4.050  1.00  0.00              
ATOM    259  C   VAL   187      31.769  21.523   3.382  1.00  0.00              
ATOM    260  O   VAL   187      30.820  20.739   3.283  1.00  0.00              
ATOM    261  N   ALA   188      33.002  21.273   2.929  1.00  0.00              
ATOM    262  CA  ALA   188      33.264  19.978   2.290  1.00  0.00              
ATOM    263  C   ALA   188      33.085  18.802   3.280  1.00  0.00              
ATOM    264  O   ALA   188      32.611  17.764   2.823  1.00  0.00              
ATOM    265  N   MET   189      33.586  18.974   4.486  1.00  0.00              
ATOM    266  CA  MET   189      33.538  17.944   5.531  1.00  0.00              
ATOM    267  C   MET   189      32.071  17.647   5.868  1.00  0.00              
ATOM    268  O   MET   189      31.727  16.461   6.099  1.00  0.00              
ATOM    269  N   PHE   190      31.306  18.740   5.881  1.00  0.00              
ATOM    270  CA  PHE   190      29.865  18.632   6.205  1.00  0.00              
ATOM    271  C   PHE   190      29.212  17.808   5.112  1.00  0.00              
ATOM    272  O   PHE   190      28.495  16.870   5.476  1.00  0.00              
ATOM    273  N   LEU   191      29.539  18.070   3.887  1.00  0.00              
ATOM    274  CA  LEU   191      29.002  17.310   2.741  1.00  0.00              
ATOM    275  C   LEU   191      29.396  15.825   2.864  1.00  0.00              
ATOM    276  O   LEU   191      28.561  14.932   2.617  1.00  0.00              
ATOM    277  N   VAL   192      30.649  15.602   3.243  1.00  0.00              
ATOM    278  CA  VAL   192      31.103  14.173   3.389  1.00  0.00              
ATOM    279  C   VAL   192      30.223  13.427   4.374  1.00  0.00              
ATOM    280  O   VAL   192      29.813  12.264   4.117  1.00  0.00              
ATOM    281  N   TYR   193      29.983  14.016   5.526  1.00  0.00              
ATOM    282  CA  TYR   193      29.214  13.378   6.589  1.00  0.00              
ATOM    283  C   TYR   193      27.729  13.235   6.312  1.00  0.00              
ATOM    284  O   TYR   193      27.106  12.226   6.749  1.00  0.00              
ATOM    285  N   CYS   194      27.197  14.272   5.667  1.00  0.00              
ATOM    286  CA  CYS   194      25.758  14.379   5.462  1.00  0.00              
ATOM    287  C   CYS   194      25.194  13.945   4.154  1.00  0.00              
ATOM    288  O   CYS   194      23.962  13.622   4.180  1.00  0.00              
ATOM    289  N   ALA   195      25.882  13.963   3.075  1.00  0.00              
ATOM    290  CA  ALA   195      25.299  13.581   1.772  1.00  0.00              
ATOM    291  C   ALA   195      25.073  12.064   1.663  1.00  0.00              
ATOM    292  O   ALA   195      25.989  11.251   1.878  1.00  0.00              
ATOM    293  N   LEU   196      23.848  11.744   1.296  1.00  0.00              
ATOM    294  CA  LEU   196      23.406  10.363   1.079  1.00  0.00              
ATOM    295  C   LEU   196      23.771   9.933  -0.341  1.00  0.00              
ATOM    296  O   LEU   196      23.795   8.708  -0.635  1.00  0.00              
ATOM    297  N   GLU   197      23.988  10.929  -1.167  1.00  0.00              
ATOM    298  CA  GLU   197      24.358  10.694  -2.560  1.00  0.00              
ATOM    299  C   GLU   197      25.837  11.020  -2.789  1.00  0.00              
ATOM    300  O   GLU   197      26.562  11.505  -1.907  1.00  0.00              
ATOM    301  N   LYS   198      26.242  10.773  -4.003  1.00  0.00              
ATOM    302  CA  LYS   198      27.599  10.942  -4.518  1.00  0.00              
ATOM    303  C   LYS   198      27.919  12.419  -4.737  1.00  0.00              
ATOM    304  O   LYS   198      27.037  13.121  -5.296  1.00  0.00              
ATOM    305  N   GLU   199      29.078  12.839  -4.320  1.00  0.00              
ATOM    306  CA  GLU   199      29.530  14.241  -4.502  1.00  0.00              
ATOM    307  C   GLU   199      31.045  14.218  -4.635  1.00  0.00              
ATOM    308  O   GLU   199      31.611  13.104  -4.456  1.00  0.00              
ATOM    309  N   PRO   200      31.667  15.350  -4.914  1.00  0.00              
ATOM    310  CA  PRO   200      33.153  15.297  -5.016  1.00  0.00              
ATOM    311  C   PRO   200      33.800  15.163  -3.636  1.00  0.00              
ATOM    312  O   PRO   200      34.945  14.691  -3.537  1.00  0.00              
ATOM    313  N   VAL   201      33.091  15.550  -2.586  1.00  0.00              
ATOM    314  CA  VAL   201      33.620  15.492  -1.219  1.00  0.00              
ATOM    315  C   VAL   201      33.591  14.097  -0.587  1.00  0.00              
ATOM    316  O   VAL   201      34.028  13.962   0.559  1.00  0.00              
ATOM    317  N   PRO   202      33.160  13.111  -1.363  1.00  0.00              
ATOM    318  CA  PRO   202      33.184  11.730  -0.842  1.00  0.00              
ATOM    319  C   PRO   202      34.615  11.317  -0.502  1.00  0.00              
ATOM    320  O   PRO   202      34.809  10.462   0.375  1.00  0.00              
ATOM    321  N   MET   203      35.606  11.934  -1.131  1.00  0.00              
ATOM    322  CA  MET   203      36.992  11.603  -0.868  1.00  0.00              
ATOM    323  C   MET   203      37.638  12.526   0.166  1.00  0.00              
ATOM    324  O   MET   203      38.882  12.516   0.233  1.00  0.00              
ATOM    325  N   SER   204      36.844  13.191   0.970  1.00  0.00              
ATOM    326  CA  SER   204      37.375  14.073   2.023  1.00  0.00              
ATOM    327  C   SER   204      38.455  13.382   2.829  1.00  0.00              
ATOM    328  O   SER   204      39.400  14.078   3.297  1.00  0.00              
ATOM    329  N   LEU   205      38.266  12.084   3.147  1.00  0.00              
ATOM    330  CA  LEU   205      39.243  11.364   3.976  1.00  0.00              
ATOM    331  C   LEU   205      40.116  10.383   3.189  1.00  0.00              
ATOM    332  O   LEU   205      40.573   9.354   3.741  1.00  0.00              
ATOM    333  N   PRO   206      40.297  10.656   1.935  1.00  0.00              
ATOM    334  CA  PRO   206      41.114   9.840   1.031  1.00  0.00              
ATOM    335  C   PRO   206      40.180   8.883   0.284  1.00  0.00              
ATOM    336  O   PRO   206      38.938   9.017   0.222  1.00  0.00              
ATOM    337  N   PRO   207      40.821   7.925  -0.363  1.00  0.00              
ATOM    338  CA  PRO   207      40.103   6.912  -1.165  1.00  0.00              
ATOM    339  C   PRO   207      39.152   6.067  -0.338  1.00  0.00              
ATOM    340  O   PRO   207      39.453   5.641   0.791  1.00  0.00              
ATOM    341  N   ALA   208      37.978   5.762  -0.877  1.00  0.00              
ATOM    342  CA  ALA   208      36.946   4.994  -0.233  1.00  0.00              
ATOM    343  C   ALA   208      37.280   3.494  -0.169  1.00  0.00              
ATOM    344  O   ALA   208      37.727   2.927  -1.143  1.00  0.00              
ATOM    345  N   LEU   209      36.944   2.893   0.975  1.00  0.00              
ATOM    346  CA  LEU   209      37.124   1.459   1.185  1.00  0.00              
ATOM    347  C   LEU   209      35.886   0.705   0.512  1.00  0.00              
ATOM    348  O   LEU   209      36.204  -0.597   0.609  1.00  0.00              
END
