REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0071AL215_1_4 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0071  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1huw 
ATOM      1  N   ALA    98     -41.788  -7.685 -19.687  1.00  0.00              
ATOM      2  CA  ALA    98     -40.965  -6.725 -18.979  1.00  0.00              
ATOM      3  C   ALA    98     -41.107  -6.756 -17.457  1.00  0.00              
ATOM      4  O   ALA    98     -40.123  -6.752 -16.721  1.00  0.00              
ATOM      5  N   PRO    99     -42.327  -6.792 -16.924  1.00  0.00              
ATOM      6  CA  PRO    99     -42.478  -6.793 -15.467  1.00  0.00              
ATOM      7  C   PRO    99     -42.028  -8.028 -14.734  1.00  0.00              
ATOM      8  O   PRO    99     -41.592  -7.944 -13.586  1.00  0.00              
ATOM      9  N   VAL   100     -42.154  -9.168 -15.430  1.00  0.00              
ATOM     10  CA  VAL   100     -41.616 -10.426 -14.920  1.00  0.00              
ATOM     11  C   VAL   100     -40.117 -10.324 -14.667  1.00  0.00              
ATOM     12  O   VAL   100     -39.626 -10.604 -13.566  1.00  0.00              
ATOM     13  N   LEU   101     -39.385  -9.892 -15.712  1.00  0.00              
ATOM     14  CA  LEU   101     -37.933  -9.835 -15.645  1.00  0.00              
ATOM     15  C   LEU   101     -37.524  -8.744 -14.672  1.00  0.00              
ATOM     16  O   LEU   101     -36.569  -8.928 -13.917  1.00  0.00              
ATOM     17  N   ASN   102     -38.258  -7.602 -14.611  1.00  0.00              
ATOM     18  CA  ASN   102     -37.920  -6.528 -13.671  1.00  0.00              
ATOM     19  C   ASN   102     -38.088  -7.009 -12.215  1.00  0.00              
ATOM     20  O   ASN   102     -37.333  -6.675 -11.293  1.00  0.00              
ATOM     21  N   ILE   103     -39.037  -7.904 -11.969  1.00  0.00              
ATOM     22  CA  ILE   103     -39.211  -8.452 -10.632  1.00  0.00              
ATOM     23  C   ILE   103     -38.380  -9.660 -10.235  1.00  0.00              
ATOM     24  O   ILE   103     -38.309 -10.065  -9.071  1.00  0.00              
ATOM     25  N   GLN   104     -37.745 -10.269 -11.236  1.00  0.00              
ATOM     26  CA  GLN   104     -37.023 -11.497 -11.010  1.00  0.00              
ATOM     27  C   GLN   104     -35.785 -11.312 -10.172  1.00  0.00              
ATOM     28  O   GLN   104     -35.140 -10.276 -10.252  1.00  0.00              
ATOM     29  N   PHE   105     -35.449 -12.254  -9.289  1.00  0.00              
ATOM     30  CA  PHE   105     -34.183 -12.238  -8.577  1.00  0.00              
ATOM     31  C   PHE   105     -33.106 -13.055  -9.299  1.00  0.00              
ATOM     32  O   PHE   105     -32.017 -13.182  -8.771  1.00  0.00              
ATOM     33  N   ARG   106     -33.384 -13.660 -10.458  1.00  0.00              
ATOM     34  CA  ARG   106     -32.459 -14.491 -11.235  1.00  0.00              
ATOM     35  C   ARG   106     -31.447 -13.542 -11.819  1.00  0.00              
ATOM     36  O   ARG   106     -31.790 -12.522 -12.419  1.00  0.00              
ATOM     37  N   TYR   107     -30.191 -13.932 -11.642  1.00  0.00              
ATOM     38  CA  TYR   107     -29.071 -13.132 -12.092  1.00  0.00              
ATOM     39  C   TYR   107     -29.254 -12.743 -13.554  1.00  0.00              
ATOM     40  O   TYR   107     -29.545 -13.569 -14.419  1.00  0.00              
ATOM     41  N   GLY   108     -29.223 -11.417 -13.726  1.00  0.00              
ATOM     42  CA  GLY   108     -29.304 -10.785 -15.024  1.00  0.00              
ATOM     43  C   GLY   108     -30.670 -10.591 -15.612  1.00  0.00              
ATOM     44  O   GLY   108     -30.760 -10.003 -16.682  1.00  0.00              
ATOM     45  N   GLY   109     -31.757 -11.047 -14.999  1.00  0.00              
ATOM     46  CA  GLY   109     -33.076 -10.881 -15.571  1.00  0.00              
ATOM     47  C   GLY   109     -33.565  -9.449 -15.484  1.00  0.00              
ATOM     48  O   GLY   109     -34.015  -8.882 -16.472  1.00  0.00              
ATOM     49  N   THR   110     -33.430  -8.846 -14.300  1.00  0.00              
ATOM     50  CA  THR   110     -33.968  -7.513 -14.038  1.00  0.00              
ATOM     51  C   THR   110     -33.294  -6.377 -14.794  1.00  0.00              
ATOM     52  O   THR   110     -33.940  -5.363 -15.078  1.00  0.00              
ATOM     53  N   PHE   111     -32.017  -6.490 -15.141  1.00  0.00              
ATOM     54  CA  PHE   111     -31.471  -5.414 -15.922  1.00  0.00              
ATOM     55  C   PHE   111     -31.206  -5.793 -17.358  1.00  0.00              
ATOM     56  O   PHE   111     -30.407  -5.138 -18.020  1.00  0.00              
ATOM     57  N   GLN   112     -31.853  -6.865 -17.855  1.00  0.00              
ATOM     58  CA  GLN   112     -31.800  -7.243 -19.275  1.00  0.00              
ATOM     59  C   GLN   112     -32.862  -6.565 -20.134  1.00  0.00              
ATOM     60  O   GLN   112     -34.019  -6.482 -19.730  1.00  0.00              
ATOM     61  N   ASN   113     -32.504  -6.040 -21.314  1.00  0.00              
ATOM     62  CA  ASN   113     -33.485  -5.507 -22.233  1.00  0.00              
ATOM     63  C   ASN   113     -33.607  -6.705 -23.141  1.00  0.00              
ATOM     64  O   ASN   113     -32.767  -6.955 -24.002  1.00  0.00              
ATOM     65  N   VAL   114     -34.657  -7.483 -22.912  1.00  0.00              
ATOM     66  CA  VAL   114     -34.794  -8.717 -23.635  1.00  0.00              
ATOM     67  C   VAL   114     -35.219  -8.405 -25.062  1.00  0.00              
ATOM     68  O   VAL   114     -34.942  -9.204 -25.943  1.00  0.00              
ATOM     69  N   SER   115     -35.793  -7.262 -25.406  1.00  0.00              
ATOM     70  CA  SER   115     -36.103  -6.979 -26.805  1.00  0.00              
ATOM     71  C   SER   115     -34.834  -6.889 -27.651  1.00  0.00              
ATOM     72  O   SER   115     -34.813  -7.338 -28.796  1.00  0.00              
ATOM     73  N   VAL   116     -33.806  -6.260 -27.084  1.00  0.00              
ATOM     74  CA  VAL   116     -32.512  -6.099 -27.714  1.00  0.00              
ATOM     75  C   VAL   116     -31.765  -7.405 -27.909  1.00  0.00              
ATOM     76  O   VAL   116     -31.064  -7.571 -28.912  1.00  0.00              
ATOM     77  N   LYS   117     -31.894  -8.302 -26.935  1.00  0.00              
ATOM     78  CA  LYS   117     -31.259  -9.598 -27.026  1.00  0.00              
ATOM     79  C   LYS   117     -31.857 -10.354 -28.180  1.00  0.00              
ATOM     80  O   LYS   117     -31.137 -11.011 -28.906  1.00  0.00              
ATOM     81  N   LEU   118     -33.147 -10.237 -28.453  1.00  0.00              
ATOM     82  CA  LEU   118     -33.751 -10.887 -29.584  1.00  0.00              
ATOM     83  C   LEU   118     -33.392 -10.201 -30.923  1.00  0.00              
ATOM     84  O   LEU   118     -33.243 -10.866 -31.960  1.00  0.00              
ATOM     85  N   PRO   119     -33.264  -8.868 -30.972  1.00  0.00              
ATOM     86  CA  PRO   119     -32.900  -8.193 -32.211  1.00  0.00              
ATOM     87  C   PRO   119     -31.478  -8.531 -32.643  1.00  0.00              
ATOM     88  O   PRO   119     -31.202  -8.652 -33.833  1.00  0.00              
END
