REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0071AL215_1_2 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0071  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1huw 
ATOM      1  N   LEU    26     -32.336 -17.768 -19.425  1.00  0.00              
ATOM      2  CA  LEU    26     -33.094 -16.688 -18.841  1.00  0.00              
ATOM      3  C   LEU    26     -34.541 -17.065 -18.897  1.00  0.00              
ATOM      4  O   LEU    26     -35.195 -16.983 -17.886  1.00  0.00              
ATOM      5  N   LYS    27     -35.026 -17.586 -20.009  1.00  0.00              
ATOM      6  CA  LYS    27     -36.421 -17.943 -20.129  1.00  0.00              
ATOM      7  C   LYS    27     -36.786 -19.069 -19.164  1.00  0.00              
ATOM      8  O   LYS    27     -37.829 -19.000 -18.537  1.00  0.00              
ATOM      9  N   SER    28     -35.913 -20.057 -18.947  1.00  0.00              
ATOM     10  CA  SER    28     -36.186 -21.216 -18.114  1.00  0.00              
ATOM     11  C   SER    28     -36.201 -20.908 -16.619  1.00  0.00              
ATOM     12  O   SER    28     -37.078 -21.321 -15.852  1.00  0.00              
ATOM     13  N   GLU    29     -35.169 -20.222 -16.185  1.00  0.00              
ATOM     14  CA  GLU    29     -35.059 -19.850 -14.802  1.00  0.00              
ATOM     15  C   GLU    29     -36.099 -18.848 -14.359  1.00  0.00              
ATOM     16  O   GLU    29     -36.573 -18.980 -13.238  1.00  0.00              
ATOM     17  N   PHE    30     -36.533 -17.895 -15.174  1.00  0.00              
ATOM     18  CA  PHE    30     -37.549 -16.948 -14.705  1.00  0.00              
ATOM     19  C   PHE    30     -38.886 -17.630 -14.756  1.00  0.00              
ATOM     20  O   PHE    30     -39.715 -17.304 -13.932  1.00  0.00              
ATOM     21  N   ARG    31     -39.096 -18.566 -15.685  1.00  0.00              
ATOM     22  CA  ARG    31     -40.279 -19.414 -15.709  1.00  0.00              
ATOM     23  C   ARG    31     -40.355 -20.290 -14.427  1.00  0.00              
ATOM     24  O   ARG    31     -41.430 -20.377 -13.820  1.00  0.00              
ATOM     25  N   GLN    32     -39.275 -20.944 -13.952  1.00  0.00              
ATOM     26  CA  GLN    32     -39.351 -21.714 -12.717  1.00  0.00              
ATOM     27  C   GLN    32     -39.522 -20.870 -11.443  1.00  0.00              
ATOM     28  O   GLN    32     -40.238 -21.265 -10.520  1.00  0.00              
ATOM     29  N   ASN    33     -38.862 -19.699 -11.348  1.00  0.00              
ATOM     30  CA  ASN    33     -38.963 -18.852 -10.180  1.00  0.00              
ATOM     31  C   ASN    33     -40.390 -18.327 -10.070  1.00  0.00              
ATOM     32  O   ASN    33     -40.938 -18.324  -8.977  1.00  0.00              
ATOM     33  N   LEU    34     -41.010 -17.923 -11.192  1.00  0.00              
ATOM     34  CA  LEU    34     -42.379 -17.437 -11.266  1.00  0.00              
ATOM     35  C   LEU    34     -43.396 -18.512 -10.851  1.00  0.00              
ATOM     36  O   LEU    34     -44.315 -18.295 -10.060  1.00  0.00              
ATOM     37  N   GLY    35     -43.248 -19.696 -11.452  1.00  0.00              
ATOM     38  CA  GLY    35     -44.097 -20.803 -11.161  1.00  0.00              
ATOM     39  C   GLY    35     -43.974 -21.118  -9.679  1.00  0.00              
ATOM     40  O   GLY    35     -44.980 -21.189  -9.004  1.00  0.00              
ATOM     41  N   ARG    36     -42.784 -21.195  -9.115  1.00  0.00              
ATOM     42  CA  ARG    36     -42.618 -21.576  -7.735  1.00  0.00              
ATOM     43  C   ARG    36     -43.074 -20.463  -6.809  1.00  0.00              
ATOM     44  O   ARG    36     -43.714 -20.748  -5.809  1.00  0.00              
ATOM     45  N   MET    37     -42.870 -19.194  -7.131  1.00  0.00              
ATOM     46  CA  MET    37     -43.288 -18.106  -6.277  1.00  0.00              
ATOM     47  C   MET    37     -44.774 -17.887  -6.281  1.00  0.00              
ATOM     48  O   MET    37     -45.347 -17.674  -5.229  1.00  0.00              
ATOM     49  N   PHE    38     -45.418 -17.981  -7.433  1.00  0.00              
ATOM     50  CA  PHE    38     -46.787 -17.542  -7.588  1.00  0.00              
ATOM     51  C   PHE    38     -47.859 -18.521  -8.018  1.00  0.00              
ATOM     52  O   PHE    38     -49.007 -18.162  -7.761  1.00  0.00              
ATOM     53  N   ILE    39     -47.589 -19.668  -8.700  1.00  0.00              
ATOM     54  CA  ILE    39     -48.643 -20.541  -9.242  1.00  0.00              
ATOM     55  C   ILE    39     -48.911 -21.640  -8.248  1.00  0.00              
ATOM     56  O   ILE    39     -47.988 -22.309  -7.812  1.00  0.00              
ATOM     57  N   PHE    40     -50.134 -21.825  -7.758  1.00  0.00              
ATOM     58  CA  PHE    40     -50.404 -22.872  -6.794  1.00  0.00              
ATOM     59  C   PHE    40     -50.342 -24.186  -7.563  1.00  0.00              
ATOM     60  O   PHE    40     -50.690 -24.217  -8.744  1.00  0.00              
ATOM     61  N   TYR    41     -49.835 -25.227  -6.895  1.00  0.00              
ATOM     62  CA  TYR    41     -49.631 -26.579  -7.401  1.00  0.00              
ATOM     63  C   TYR    41     -50.783 -27.160  -8.222  1.00  0.00              
ATOM     64  O   TYR    41     -50.647 -27.857  -9.221  1.00  0.00              
ATOM     65  N   GLY    42     -51.956 -26.779  -7.763  1.00  0.00              
ATOM     66  CA  GLY    42     -53.215 -27.108  -8.372  1.00  0.00              
ATOM     67  C   GLY    42     -53.178 -26.637  -9.814  1.00  0.00              
ATOM     68  O   GLY    42     -53.458 -27.408 -10.728  1.00  0.00              
ATOM     69  N   ASN    43     -52.787 -25.379 -10.030  1.00  0.00              
ATOM     70  CA  ASN    43     -52.784 -24.819 -11.373  1.00  0.00              
ATOM     71  C   ASN    43     -51.623 -25.238 -12.277  1.00  0.00              
ATOM     72  O   ASN    43     -51.742 -25.130 -13.498  1.00  0.00              
ATOM     73  N   LYS    44     -50.529 -25.731 -11.674  1.00  0.00              
ATOM     74  CA  LYS    44     -49.360 -26.233 -12.366  1.00  0.00              
ATOM     75  C   LYS    44     -49.720 -27.523 -13.085  1.00  0.00              
ATOM     76  O   LYS    44     -49.394 -27.648 -14.267  1.00  0.00              
ATOM     77  N   THR    45     -50.414 -28.471 -12.431  1.00  0.00              
ATOM     78  CA  THR    45     -50.770 -29.733 -13.078  1.00  0.00              
ATOM     79  C   THR    45     -51.809 -29.591 -14.156  1.00  0.00              
ATOM     80  O   THR    45     -51.787 -30.259 -15.176  1.00  0.00              
ATOM     81  N   SER    46     -52.723 -28.664 -13.931  1.00  0.00              
ATOM     82  CA  SER    46     -53.759 -28.371 -14.878  1.00  0.00              
ATOM     83  C   SER    46     -53.230 -27.864 -16.220  1.00  0.00              
ATOM     84  O   SER    46     -53.609 -28.356 -17.293  1.00  0.00              
ATOM     85  N   THR    47     -52.327 -26.870 -16.130  1.00  0.00              
ATOM     86  CA  THR    47     -51.743 -26.243 -17.314  1.00  0.00              
ATOM     87  C   THR    47     -50.829 -27.251 -17.999  1.00  0.00              
ATOM     88  O   THR    47     -50.803 -27.278 -19.225  1.00  0.00              
ATOM     89  N   GLN    48     -50.106 -28.087 -17.240  1.00  0.00              
ATOM     90  CA  GLN    48     -49.263 -29.113 -17.809  1.00  0.00              
ATOM     91  C   GLN    48     -50.046 -29.987 -18.793  1.00  0.00              
ATOM     92  O   GLN    48     -49.616 -30.227 -19.926  1.00  0.00              
ATOM     93  N   PHE    49     -51.259 -30.381 -18.378  1.00  0.00              
ATOM     94  CA  PHE    49     -52.031 -31.291 -19.184  1.00  0.00              
ATOM     95  C   PHE    49     -52.811 -30.575 -20.250  1.00  0.00              
ATOM     96  O   PHE    49     -53.230 -31.218 -21.207  1.00  0.00              
ATOM     97  N   LEU    50     -52.999 -29.251 -20.135  1.00  0.00              
ATOM     98  CA  LEU    50     -53.620 -28.440 -21.175  1.00  0.00              
ATOM     99  C   LEU    50     -52.914 -27.091 -21.288  1.00  0.00              
ATOM    100  O   LEU    50     -53.360 -26.101 -20.690  1.00  0.00              
ATOM    101  N   ASN    51     -51.776 -27.015 -22.017  1.00  0.00              
ATOM    102  CA  ASN    51     -51.067 -25.760 -22.296  1.00  0.00              
ATOM    103  C   ASN    51     -51.825 -24.651 -23.063  1.00  0.00              
ATOM    104  O   ASN    51     -52.591 -24.952 -23.986  1.00  0.00              
ATOM    105  N   PHE    52     -51.658 -23.364 -22.685  1.00  0.00              
ATOM    106  CA  PHE    52     -52.332 -22.251 -23.360  1.00  0.00              
ATOM    107  C   PHE    52     -51.431 -21.638 -24.414  1.00  0.00              
ATOM    108  O   PHE    52     -50.847 -20.561 -24.334  1.00  0.00              
ATOM    109  N   THR    53     -51.403 -22.479 -25.444  1.00  0.00              
ATOM    110  CA  THR    53     -50.626 -22.279 -26.655  1.00  0.00              
ATOM    111  C   THR    53     -51.222 -21.202 -27.572  1.00  0.00              
ATOM    112  O   THR    53     -50.625 -20.773 -28.572  1.00  0.00              
ATOM    113  N   PRO    54     -52.434 -20.757 -27.208  1.00  0.00              
ATOM    114  CA  PRO    54     -53.096 -19.632 -27.848  1.00  0.00              
ATOM    115  C   PRO    54     -52.276 -18.385 -27.578  1.00  0.00              
ATOM    116  O   PRO    54     -52.157 -17.527 -28.451  1.00  0.00              
ATOM    117  N   THR    55     -51.701 -18.352 -26.356  1.00  0.00              
ATOM    118  CA  THR    55     -50.807 -17.295 -25.912  1.00  0.00              
ATOM    119  C   THR    55     -49.536 -17.287 -26.738  1.00  0.00              
ATOM    120  O   THR    55     -48.972 -16.210 -26.907  1.00  0.00              
END
