REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0068AL215_1_9 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0068  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1rmg 
ATOM      1  N   LYS   349      32.647  99.569 122.831  1.00  0.00              
ATOM      2  CA  LYS   349      33.075 100.293 124.024  1.00  0.00              
ATOM      3  C   LYS   349      32.503  99.550 125.236  1.00  0.00              
ATOM      4  O   LYS   349      33.143  99.466 126.285  1.00  0.00              
ATOM      5  N   LYS   350      31.296  99.004 125.068  1.00  0.00              
ATOM      6  CA  LYS   350      30.590  98.238 126.106  1.00  0.00              
ATOM      7  C   LYS   350      29.879  97.082 125.383  1.00  0.00              
ATOM      8  O   LYS   350      29.556  97.203 124.197  1.00  0.00              
ATOM      9  N   PRO   351      29.644  95.976 126.093  1.00  0.00              
ATOM     10  CA  PRO   351      28.963  94.807 125.522  1.00  0.00              
ATOM     11  C   PRO   351      27.447  94.913 125.744  1.00  0.00              
ATOM     12  O   PRO   351      26.963  95.942 126.202  1.00  0.00              
ATOM     13  N   ILE   352      26.703  93.838 125.508  1.00  0.00              
ATOM     14  CA  ILE   352      25.253  93.901 125.645  1.00  0.00              
ATOM     15  C   ILE   352      24.612  93.350 126.910  1.00  0.00              
ATOM     16  O   ILE   352      23.404  93.119 126.966  1.00  0.00              
ATOM     17  N   GLU   353      25.418  93.179 127.943  1.00  0.00              
ATOM     18  CA  GLU   353      24.891  92.724 129.212  1.00  0.00              
ATOM     19  C   GLU   353      24.143  91.416 129.199  1.00  0.00              
ATOM     20  O   GLU   353      24.362  90.590 128.321  1.00  0.00              
ATOM     21  N   VAL   354      23.231  91.256 130.155  1.00  0.00              
ATOM     22  CA  VAL   354      22.467  90.019 130.318  1.00  0.00              
ATOM     23  C   VAL   354      20.991  90.209 130.666  1.00  0.00              
ATOM     24  O   VAL   354      20.243  89.228 130.787  1.00  0.00              
ATOM     25  N   THR   355      20.545  91.451 130.778  1.00  0.00              
ATOM     26  CA  THR   355      19.166  91.656 131.194  1.00  0.00              
ATOM     27  C   THR   355      18.253  92.497 130.317  1.00  0.00              
ATOM     28  O   THR   355      17.132  92.792 130.716  1.00  0.00              
ATOM     29  N   MET   356      18.736  92.929 129.163  1.00  0.00              
ATOM     30  CA  MET   356      17.931  93.725 128.254  1.00  0.00              
ATOM     31  C   MET   356      18.097  93.118 126.871  1.00  0.00              
ATOM     32  O   MET   356      19.118  92.486 126.584  1.00  0.00              
ATOM     33  N   LYS   357      17.094  93.282 126.020  1.00  0.00              
ATOM     34  CA  LYS   357      17.157  92.724 124.687  1.00  0.00              
ATOM     35  C   LYS   357      18.357  93.297 123.954  1.00  0.00              
ATOM     36  O   LYS   357      18.851  94.379 124.295  1.00  0.00              
ATOM     37  N   ASN   358      18.814  92.568 122.947  1.00  0.00              
ATOM     38  CA  ASN   358      19.969  92.965 122.172  1.00  0.00              
ATOM     39  C   ASN   358      19.509  93.412 120.796  1.00  0.00              
ATOM     40  O   ASN   358      18.817  92.673 120.105  1.00  0.00              
ATOM     41  N   VAL   359      19.854  94.649 120.395  1.00  0.00              
ATOM     42  CA  VAL   359      19.456  95.162 119.081  1.00  0.00              
ATOM     43  C   VAL   359      20.129  94.373 117.956  1.00  0.00              
ATOM     44  O   VAL   359      21.299  93.999 118.066  1.00  0.00              
ATOM     45  N   LYS   360      19.383  94.114 116.890  1.00  0.00              
ATOM     46  CA  LYS   360      19.881  93.359 115.753  1.00  0.00              
ATOM     47  C   LYS   360      20.913  94.159 114.957  1.00  0.00              
ATOM     48  O   LYS   360      20.623  95.252 114.478  1.00  0.00              
ATOM     49  N   LEU   361      22.129  93.615 114.787  1.00  0.00              
ATOM     50  CA  LEU   361      23.162  94.337 114.036  1.00  0.00              
ATOM     51  C   LEU   361      23.039  94.175 112.530  1.00  0.00              
ATOM     52  O   LEU   361      22.162  93.457 112.045  1.00  0.00              
ATOM     53  N   THR   362      23.876  94.897 111.790  1.00  0.00              
ATOM     54  CA  THR   362      23.930  94.751 110.342  1.00  0.00              
ATOM     55  C   THR   362      25.175  93.876 110.135  1.00  0.00              
ATOM     56  O   THR   362      26.038  93.787 111.023  1.00  0.00              
ATOM     57  N   SER   363      25.266  93.202 108.997  1.00  0.00              
ATOM     58  CA  SER   363      26.445  92.392 108.726  1.00  0.00              
ATOM     59  C   SER   363      27.549  93.340 108.229  1.00  0.00              
ATOM     60  O   SER   363      27.345  94.085 107.281  1.00  0.00              
ATOM     61  N   ASP   364      28.721  93.336 108.878  1.00  0.00              
ATOM     62  CA  ASP   364      29.767  94.240 108.398  1.00  0.00              
ATOM     63  C   ASP   364      30.497  93.791 107.133  1.00  0.00              
ATOM     64  O   ASP   364      30.298  92.693 106.612  1.00  0.00              
ATOM     65  N   SER   365      31.292  94.692 106.586  1.00  0.00              
ATOM     66  CA  SER   365      32.068  94.364 105.416  1.00  0.00              
ATOM     67  C   SER   365      33.538  94.622 105.726  1.00  0.00              
ATOM     68  O   SER   365      34.323  94.938 104.850  1.00  0.00              
ATOM     69  N   THR   366      33.909  94.498 106.986  1.00  0.00              
ATOM     70  CA  THR   366      35.294  94.680 107.360  1.00  0.00              
ATOM     71  C   THR   366      35.507  93.846 108.590  1.00  0.00              
ATOM     72  O   THR   366      34.885  94.093 109.629  1.00  0.00              
ATOM     73  N   TRP   367      36.408  92.876 108.481  1.00  0.00              
ATOM     74  CA  TRP   367      36.687  91.943 109.581  1.00  0.00              
ATOM     75  C   TRP   367      38.123  91.953 110.137  1.00  0.00              
ATOM     76  O   TRP   367      38.336  91.764 111.339  1.00  0.00              
ATOM     77  N   GLN   368      39.105  92.209 109.274  1.00  0.00              
ATOM     78  CA  GLN   368      40.497  92.238 109.706  1.00  0.00              
ATOM     79  C   GLN   368      41.180  93.442 109.051  1.00  0.00              
ATOM     80  O   GLN   368      40.923  93.751 107.897  1.00  0.00              
ATOM     81  N   ILE   369      42.063  94.133 109.786  1.00  0.00              
ATOM     82  CA  ILE   369      42.721  95.296 109.186  1.00  0.00              
ATOM     83  C   ILE   369      43.373  95.080 107.827  1.00  0.00              
ATOM     84  O   ILE   369      44.129  94.124 107.622  1.00  0.00              
ATOM     85  N   LYS   370      43.004  95.951 106.887  1.00  0.00              
ATOM     86  CA  LYS   370      43.567  95.939 105.551  1.00  0.00              
ATOM     87  C   LYS   370      43.015  94.946 104.569  1.00  0.00              
ATOM     88  O   LYS   370      43.463  94.912 103.423  1.00  0.00              
ATOM     89  N   ASN   371      42.018  94.165 104.972  1.00  0.00              
ATOM     90  CA  ASN   371      41.460  93.160 104.069  1.00  0.00              
ATOM     91  C   ASN   371      40.010  93.459 103.746  1.00  0.00              
ATOM     92  O   ASN   371      39.336  94.153 104.508  1.00  0.00              
ATOM     93  N   VAL   372      39.545  92.940 102.612  1.00  0.00              
ATOM     94  CA  VAL   372      38.157  93.113 102.188  1.00  0.00              
ATOM     95  C   VAL   372      37.493  91.741 102.256  1.00  0.00              
ATOM     96  O   VAL   372      38.179  90.724 102.236  1.00  0.00              
ATOM     97  N   ASN   373      36.154  91.691 102.372  1.00  0.00              
ATOM     98  CA  ASN   373      35.480  90.386 102.432  1.00  0.00              
ATOM     99  C   ASN   373      35.653  89.609 101.125  1.00  0.00              
ATOM    100  O   ASN   373      35.739  90.199 100.054  1.00  0.00              
ATOM    101  N   VAL   374      35.700  88.284 101.220  1.00  0.00              
ATOM    102  CA  VAL   374      35.851  87.438 100.038  1.00  0.00              
ATOM    103  C   VAL   374      34.646  87.489  99.120  1.00  0.00              
ATOM    104  O   VAL   374      34.782  87.341  97.907  1.00  0.00              
ATOM    105  N   LYS   375      33.465  87.641  99.703  1.00  0.00              
ATOM    106  CA  LYS   375      32.242  87.650  98.928  1.00  0.00              
ATOM    107  C   LYS   375      31.355  88.823  99.307  1.00  0.00              
ATOM    108  O   LYS   375      31.178  89.123 100.490  1.00  0.00              
ATOM    109  N   LYS   376      30.801  89.481  98.292  1.00  0.00              
ATOM    110  CA  LYS   376      29.924  90.626  98.480  1.00  0.00              
ATOM    111  C   LYS   376      28.643  90.203  99.188  1.00  0.00              
ATOM    112  O   LYS   376      28.200  89.061  99.051  1.00  0.00              
END
