REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0068AL215_1_2 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0068  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1rmg 
ATOM      1  N   GLY   112      12.370  88.145 109.855  1.00  0.00              
ATOM      2  CA  GLY   112      12.973  88.004 111.180  1.00  0.00              
ATOM      3  C   GLY   112      12.122  87.080 112.061  1.00  0.00              
ATOM      4  O   GLY   112      10.903  87.269 112.163  1.00  0.00              
ATOM      5  N   ILE   113      12.772  86.102 112.694  1.00  0.00              
ATOM      6  CA  ILE   113      12.107  85.132 113.569  1.00  0.00              
ATOM      7  C   ILE   113      12.357  85.527 115.015  1.00  0.00              
ATOM      8  O   ILE   113      13.502  85.713 115.402  1.00  0.00              
ATOM      9  N   TYR   114      11.302  85.628 115.817  1.00  0.00              
ATOM     10  CA  TYR   114      11.429  85.995 117.220  1.00  0.00              
ATOM     11  C   TYR   114      11.076  84.798 118.071  1.00  0.00              
ATOM     12  O   TYR   114      10.051  84.157 117.845  1.00  0.00              
ATOM     13  N   GLY   115      11.885  84.522 119.084  1.00  0.00              
ATOM     14  CA  GLY   115      11.592  83.401 119.949  1.00  0.00              
ATOM     15  C   GLY   115      10.460  83.727 120.922  1.00  0.00              
ATOM     16  O   GLY   115      10.515  84.722 121.644  1.00  0.00              
ATOM     17  N   PRO   116       9.419  82.901 120.899  1.00  0.00              
ATOM     18  CA  PRO   116       8.307  83.021 121.836  1.00  0.00              
ATOM     19  C   PRO   116       8.216  81.669 122.590  1.00  0.00              
ATOM     20  O   PRO   116       7.650  81.600 123.685  1.00  0.00              
ATOM     21  N   GLY   117       8.767  80.607 121.992  1.00  0.00              
ATOM     22  CA  GLY   117       8.747  79.280 122.599  1.00  0.00              
ATOM     23  C   GLY   117       9.703  79.204 123.769  1.00  0.00              
ATOM     24  O   GLY   117      10.727  79.884 123.779  1.00  0.00              
ATOM     25  N   THR   118       9.407  78.350 124.735  1.00  0.00              
ATOM     26  CA  THR   118      10.251  78.244 125.918  1.00  0.00              
ATOM     27  C   THR   118      10.883  76.870 126.142  1.00  0.00              
ATOM     28  O   THR   118      11.541  76.641 127.168  1.00  0.00              
ATOM     29  N   ILE   119      10.682  75.954 125.205  1.00  0.00              
ATOM     30  CA  ILE   119      11.247  74.620 125.339  1.00  0.00              
ATOM     31  C   ILE   119      12.776  74.672 125.231  1.00  0.00              
ATOM     32  O   ILE   119      13.358  75.697 124.854  1.00  0.00              
ATOM     33  N   ASP   120      13.412  73.569 125.614  1.00  0.00              
ATOM     34  CA  ASP   120      14.860  73.401 125.551  1.00  0.00              
ATOM     35  C   ASP   120      15.171  72.860 124.156  1.00  0.00              
ATOM     36  O   ASP   120      14.259  72.634 123.360  1.00  0.00              
ATOM     37  N   GLY   121      16.443  72.613 123.869  1.00  0.00              
ATOM     38  CA  GLY   121      16.789  72.065 122.570  1.00  0.00              
ATOM     39  C   GLY   121      17.307  73.085 121.584  1.00  0.00              
ATOM     40  O   GLY   121      17.956  74.061 121.967  1.00  0.00              
ATOM     41  N   GLN   122      17.025  72.849 120.311  1.00  0.00              
ATOM     42  CA  GLN   122      17.459  73.724 119.234  1.00  0.00              
ATOM     43  C   GLN   122      16.235  74.324 118.535  1.00  0.00              
ATOM     44  O   GLN   122      15.339  73.591 118.092  1.00  0.00              
ATOM     45  N   GLY   123      16.184  75.646 118.428  1.00  0.00              
ATOM     46  CA  GLY   123      15.058  76.277 117.749  1.00  0.00              
ATOM     47  C   GLY   123      14.965  75.782 116.313  1.00  0.00              
ATOM     48  O   GLY   123      13.888  75.418 115.828  1.00  0.00              
ATOM     49  N   GLY   124      16.107  75.723 115.640  1.00  0.00              
ATOM     50  CA  GLY   124      16.155  75.269 114.261  1.00  0.00              
ATOM     51  C   GLY   124      17.277  74.247 114.114  1.00  0.00              
ATOM     52  O   GLY   124      18.431  74.537 114.423  1.00  0.00              
ATOM     53  N   VAL   125      16.934  73.043 113.673  1.00  0.00              
ATOM     54  CA  VAL   125      17.931  71.996 113.485  1.00  0.00              
ATOM     55  C   VAL   125      17.768  71.417 112.110  1.00  0.00              
ATOM     56  O   VAL   125      16.654  71.154 111.689  1.00  0.00              
ATOM     57  N   LYS   126      18.860  71.298 111.371  1.00  0.00              
ATOM     58  CA  LYS   126      18.820  70.696 110.045  1.00  0.00              
ATOM     59  C   LYS   126      19.764  69.515 110.182  1.00  0.00              
ATOM     60  O   LYS   126      20.902  69.674 110.632  1.00  0.00              
ATOM     61  N   LEU   127      19.299  68.327 109.831  1.00  0.00              
ATOM     62  CA  LEU   127      20.136  67.153 109.955  1.00  0.00              
ATOM     63  C   LEU   127      20.033  66.251 108.746  1.00  0.00              
ATOM     64  O   LEU   127      19.060  66.308 107.976  1.00  0.00              
ATOM     65  N   GLN   128      21.058  65.417 108.595  1.00  0.00              
ATOM     66  CA  GLN   128      21.131  64.402 107.556  1.00  0.00              
ATOM     67  C   GLN   128      20.590  64.958 106.246  1.00  0.00              
ATOM     68  O   GLN   128      19.607  64.461 105.699  1.00  0.00              
END
