REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0065AL277_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : DEERFIELD 
REMARK  ---------------------------------------------------------- 
TARGET T0065  
AUTHOR 8120-3487-1357  
REMARK Matrix Used: BS_30_25%  
REMARK Alignment Method Used: Quasi-Global Dynamic Programming  
METHOD Sequence-Structure alignment based on the environments  
METHOD published in: Deerfield, Holland-Minkley, Geigel, and   
METHOD Nicholas 1997. "Classification of the Environment of   
METHOD Protein Residues" J. Prot. Chem. 16:441-446.  
METHOD   
METHOD This test uses our latest (unpublished) environment   
METHOD classifications and extentions.  
MODEL  1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1oyb 
ATOM      1  N   MET B   1      39.657  87.459  12.646  1.00  0.00              
ATOM      2  CA  MET B   1      38.908  88.681  12.577  1.00  0.00              
ATOM      3  C   MET B   1      38.200  89.071  13.847  1.00  0.00              
ATOM      4  O   MET B   1      38.066  90.266  14.146  1.00  0.00              
ATOM      5  N   LYS B   2      37.724  88.119  14.655  1.00  0.00              
ATOM      6  CA  LYS B   2      37.133  88.519  15.917  1.00  0.00              
ATOM      7  C   LYS B   2      38.224  89.080  16.828  1.00  0.00              
ATOM      8  O   LYS B   2      38.096  90.027  17.602  1.00  0.00              
ATOM      9  N   ASN B   3      39.357  88.393  16.732  1.00  0.00              
ATOM     10  CA  ASN B   3      40.514  88.654  17.530  1.00  0.00              
ATOM     11  C   ASN B   3      41.070  90.008  17.170  1.00  0.00              
ATOM     12  O   ASN B   3      41.400  90.785  18.062  1.00  0.00              
ATOM     13  N   ALA B   4      41.241  90.293  15.894  1.00  0.00              
ATOM     14  CA  ALA B   4      41.661  91.595  15.387  1.00  0.00              
ATOM     15  C   ALA B   4      40.807  92.757  15.947  1.00  0.00              
ATOM     16  O   ALA B   4      41.292  93.770  16.476  1.00  0.00              
ATOM     17  N   LYS B   5      39.496  92.584  15.924  1.00  0.00              
ATOM     18  CA  LYS B   5      38.553  93.499  16.551  1.00  0.00              
ATOM     19  C   LYS B   5      38.882  93.816  17.979  1.00  0.00              
ATOM     20  O   LYS B   5      38.767  94.945  18.417  1.00  0.00              
ATOM     21  N   GLN B   6      39.225  92.787  18.759  1.00  0.00              
ATOM     22  CA  GLN B   6      39.379  92.973  20.190  1.00  0.00              
ATOM     23  C   GLN B   6      40.775  93.330  20.591  1.00  0.00              
ATOM     24  O   GLN B   6      41.096  93.462  21.767  1.00  0.00              
ATOM     25  N   GLU B   7      41.651  93.451  19.619  1.00  0.00              
ATOM     26  CA  GLU B   7      43.034  93.822  19.896  1.00  0.00              
ATOM     27  C   GLU B   7      43.928  92.634  20.174  1.00  0.00              
ATOM     28  O   GLU B   7      45.041  92.872  20.659  1.00  0.00              
ATOM     29  N   HIS B   8      43.554  91.386  19.798  1.00  0.00              
ATOM     30  CA  HIS B   8      44.312  90.209  20.257  1.00  0.00              
ATOM     31  C   HIS B   8      45.069  89.530  19.118  1.00  0.00              
ATOM     32  O   HIS B   8      44.681  89.713  17.974  1.00  0.00              
ATOM     33  N   PHE B   9      46.138  88.796  19.399  1.00  0.00              
ATOM     34  CA  PHE B   9      46.885  88.053  18.390  1.00  0.00              
ATOM     35  C   PHE B   9      46.172  86.844  17.846  1.00  0.00              
ATOM     36  O   PHE B   9      45.293  86.326  18.524  1.00  0.00              
ATOM     37  N   GLU B  10      54.315  79.898  12.211  1.00  0.00              
ATOM     38  CA  GLU B  10      53.812  80.946  11.344  1.00  0.00              
ATOM     39  C   GLU B  10      53.862  80.626   9.903  1.00  0.00              
ATOM     40  O   GLU B  10      53.411  81.367   9.075  1.00  0.00              
ATOM     41  N   LEU B  11      54.456  79.543   9.556  1.00  0.00              
ATOM     42  CA  LEU B  11      54.593  79.181   8.173  1.00  0.00              
ATOM     43  C   LEU B  11      53.719  77.978   7.896  1.00  0.00              
ATOM     44  O   LEU B  11      54.100  77.279   6.969  1.00  0.00              
ATOM     45  N   ASP B  12      52.660  77.617   8.652  1.00  0.00              
ATOM     46  CA  ASP B  12      51.816  76.472   8.359  1.00  0.00              
ATOM     47  C   ASP B  12      50.463  76.972   8.809  1.00  0.00              
ATOM     48  O   ASP B  12      50.277  77.373   9.948  1.00  0.00              
ATOM     49  N   GLN B  13      49.505  76.960   7.947  1.00  0.00              
ATOM     50  CA  GLN B  13      48.212  77.462   8.285  1.00  0.00              
ATOM     51  C   GLN B  13      47.203  76.332   8.406  1.00  0.00              
ATOM     52  O   GLN B  13      47.485  75.195   8.017  1.00  0.00              
ATOM     53  N   GLU B  14      46.017  76.612   8.970  1.00  0.00              
ATOM     54  CA  GLU B  14      45.005  75.590   9.193  1.00  0.00              
ATOM     55  C   GLU B  14      44.357  75.164   7.887  1.00  0.00              
ATOM     56  O   GLU B  14      44.291  73.952   7.632  1.00  0.00              
ATOM     57  N   TRP B  15      43.872  76.128   7.094  1.00  0.00              
ATOM     58  CA  TRP B  15      43.242  75.875   5.797  1.00  0.00              
ATOM     59  C   TRP B  15      43.014  77.220   5.062  1.00  0.00              
ATOM     60  O   TRP B  15      43.094  78.309   5.654  1.00  0.00              
ATOM     61  N   VAL B  16      42.457  77.073   3.868  1.00  0.00              
ATOM     62  CA  VAL B  16      42.085  78.117   2.937  1.00  0.00              
ATOM     63  C   VAL B  16      41.419  79.346   3.506  1.00  0.00              
ATOM     64  O   VAL B  16      41.967  80.441   3.451  1.00  0.00              
ATOM     65  N   GLU B  17      40.230  79.135   4.071  1.00  0.00              
ATOM     66  CA  GLU B  17      39.460  80.245   4.545  1.00  0.00              
ATOM     67  C   GLU B  17      39.984  80.870   5.821  1.00  0.00              
ATOM     68  O   GLU B  17      39.584  82.011   6.102  1.00  0.00              
ATOM     69  N   LEU B  18      40.889  80.177   6.559  1.00  0.00              
ATOM     70  CA  LEU B  18      41.418  80.648   7.812  1.00  0.00              
ATOM     71  C   LEU B  18      42.478  81.545   7.360  1.00  0.00              
ATOM     72  O   LEU B  18      42.582  82.599   7.990  1.00  0.00              
ATOM     73  N   MET B  19      43.245  81.232   6.298  1.00  0.00              
ATOM     74  CA  MET B  19      44.190  82.281   5.832  1.00  0.00              
ATOM     75  C   MET B  19      43.491  83.448   5.095  1.00  0.00              
ATOM     76  O   MET B  19      43.935  84.602   5.185  1.00  0.00              
ATOM     77  N   VAL B  20      42.325  83.175   4.468  1.00  0.00              
ATOM     78  CA  VAL B  20      41.503  84.222   3.845  1.00  0.00              
ATOM     79  C   VAL B  20      41.188  85.253   4.938  1.00  0.00              
ATOM     80  O   VAL B  20      41.580  86.426   4.820  1.00  0.00              
ATOM     81  N   GLU B  21      40.613  84.700   6.030  1.00  0.00              
ATOM     82  CA  GLU B  21      40.198  85.460   7.172  1.00  0.00              
ATOM     83  C   GLU B  21      41.254  86.368   7.726  1.00  0.00              
ATOM     84  O   GLU B  21      41.047  87.589   7.849  1.00  0.00              
ATOM     85  N   ALA B  22      42.404  85.766   7.906  1.00  0.00              
ATOM     86  CA  ALA B  22      43.504  86.424   8.551  1.00  0.00              
ATOM     87  C   ALA B  22      43.999  87.572   7.770  1.00  0.00              
ATOM     88  O   ALA B  22      44.214  88.620   8.351  1.00  0.00              
ATOM     89  N   LYS B  23      44.186  87.408   6.480  1.00  0.00              
ATOM     90  CA  LYS B  23      44.711  88.533   5.751  1.00  0.00              
ATOM     91  C   LYS B  23      43.658  89.607   5.589  1.00  0.00              
ATOM     92  O   LYS B  23      44.042  90.712   5.902  1.00  0.00              
ATOM     93  N   GLU B  24      42.381  89.395   5.246  1.00  0.00              
ATOM     94  CA  GLU B  24      41.397  90.466   5.230  1.00  0.00              
ATOM     95  C   GLU B  24      41.499  91.210   6.559  1.00  0.00              
ATOM     96  O   GLU B  24      41.708  92.412   6.584  1.00  0.00              
ATOM     97  N   ALA B  25      41.591  90.455   7.658  1.00  0.00              
ATOM     98  CA  ALA B  25      41.631  91.002   8.985  1.00  0.00              
ATOM     99  C   ALA B  25      42.918  91.618   9.346  1.00  0.00              
ATOM    100  O   ALA B  25      43.106  92.183  10.421  1.00  0.00              
ATOM    101  N   ASN B  26      43.862  91.411   8.476  1.00  0.00              
ATOM    102  CA  ASN B  26      45.233  91.852   8.674  1.00  0.00              
ATOM    103  C   ASN B  26      45.785  91.413  10.020  1.00  0.00              
ATOM    104  O   ASN B  26      46.458  92.109  10.793  1.00  0.00              
ATOM    105  N   ILE B  27      54.230  81.708  18.917  1.00  0.00              
ATOM    106  CA  ILE B  27      54.268  82.167  20.297  1.00  0.00              
ATOM    107  C   ILE B  27      55.700  82.262  20.733  1.00  0.00              
ATOM    108  O   ILE B  27      56.481  81.388  20.381  1.00  0.00              
ATOM    109  N   SER B  28      56.084  83.199  21.574  1.00  0.00              
ATOM    110  CA  SER B  28      57.439  83.251  22.083  1.00  0.00              
ATOM    111  C   SER B  28      57.342  82.446  23.369  1.00  0.00              
ATOM    112  O   SER B  28      56.236  82.194  23.892  1.00  0.00              
ATOM    113  N   PRO B  29      58.470  82.070  23.961  1.00  0.00              
ATOM    114  CA  PRO B  29      58.492  81.350  25.222  1.00  0.00              
ATOM    115  C   PRO B  29      57.712  82.120  26.237  1.00  0.00              
ATOM    116  O   PRO B  29      56.885  81.594  26.941  1.00  0.00              
ATOM    117  N   GLU B  30      57.897  83.421  26.194  1.00  0.00              
ATOM    118  CA  GLU B  30      57.249  84.354  27.062  1.00  0.00              
ATOM    119  C   GLU B  30      55.756  84.337  27.090  1.00  0.00              
ATOM    120  O   GLU B  30      55.112  84.372  28.139  1.00  0.00              
ATOM    121  N   GLU B  31      55.234  84.291  25.890  1.00  0.00              
ATOM    122  CA  GLU B  31      53.826  84.237  25.724  1.00  0.00              
ATOM    123  C   GLU B  31      53.287  82.826  25.970  1.00  0.00              
ATOM    124  O   GLU B  31      52.085  82.750  26.306  1.00  0.00              
ATOM    125  N   ILE B  32      54.083  81.718  25.839  1.00  0.00              
ATOM    126  CA  ILE B  32      53.665  80.346  26.244  1.00  0.00              
ATOM    127  C   ILE B  32      53.511  80.438  27.764  1.00  0.00              
ATOM    128  O   ILE B  32      52.467  80.007  28.259  1.00  0.00              
ATOM    129  N   ARG B  33      54.451  81.025  28.549  1.00  0.00              
ATOM    130  CA  ARG B  33      54.359  81.171  30.023  1.00  0.00              
ATOM    131  C   ARG B  33      53.133  81.904  30.566  1.00  0.00              
ATOM    132  O   ARG B  33      52.547  81.561  31.606  1.00  0.00              
ATOM    133  N   LYS B  34      52.734  82.940  29.860  1.00  0.00              
ATOM    134  CA  LYS B  34      51.545  83.689  30.112  1.00  0.00              
ATOM    135  C   LYS B  34      50.337  82.794  29.914  1.00  0.00              
ATOM    136  O   LYS B  34      49.405  82.912  30.694  1.00  0.00              
ATOM    137  N   TYR B  35      50.305  81.876  28.939  1.00  0.00              
ATOM    138  CA  TYR B  35      49.160  81.013  28.761  1.00  0.00              
ATOM    139  C   TYR B  35      49.245  80.083  29.926  1.00  0.00              
ATOM    140  O   TYR B  35      48.202  79.787  30.469  1.00  0.00              
ATOM    141  N   LEU B  36      50.370  79.673  30.448  1.00  0.00              
ATOM    142  CA  LEU B  36      50.333  78.786  31.595  1.00  0.00              
ATOM    143  C   LEU B  36      49.784  79.504  32.790  1.00  0.00              
ATOM    144  O   LEU B  36      48.999  78.915  33.517  1.00  0.00              
ATOM    145  N   LEU B  37      50.180  80.770  32.973  1.00  0.00              
ATOM    146  CA  LEU B  37      49.610  81.601  34.003  1.00  0.00              
ATOM    147  C   LEU B  37      48.091  81.661  33.961  1.00  0.00              
ATOM    148  O   LEU B  37      47.397  81.481  34.987  1.00  0.00              
ATOM    149  N   LEU B  38      47.514  81.885  32.805  1.00  0.00              
ATOM    150  CA  LEU B  38      46.064  81.918  32.661  1.00  0.00              
ATOM    151  C   LEU B  38      45.371  80.584  32.869  1.00  0.00              
ATOM    152  O   LEU B  38      44.242  80.553  33.405  1.00  0.00              
ATOM    153  N   ASN B  39      45.961  79.429  32.455  1.00  0.00              
ATOM    154  CA  ASN B  39      45.447  78.111  32.769  1.00  0.00              
ATOM    155  C   ASN B  39      45.345  77.969  34.265  1.00  0.00              
ATOM    156  O   ASN B  39      44.377  77.445  34.794  1.00  0.00              
ATOM    157  N   LYS B  40      46.337  78.318  35.056  1.00  0.00              
ATOM    158  CA  LYS B  40      46.277  78.143  36.512  1.00  0.00              
ATOM    159  C   LYS B  40      45.158  78.992  37.130  1.00  0.00              
ATOM    160  O   LYS B  40      44.338  78.519  37.907  1.00  0.00              
ATOM    161  N   LYS B  41      45.022  80.254  36.731  1.00  0.00              
ATOM    162  CA  LYS B  41      44.009  81.146  37.233  1.00  0.00              
ATOM    163  C   LYS B  41      42.670  80.639  36.932  1.00  0.00              
ATOM    164  O   LYS B  41      41.842  80.658  37.835  1.00  0.00              
ATOM    165  N   SER B  42      42.435  80.208  35.698  1.00  0.00              
ATOM    166  CA  SER B  42      41.118  79.697  35.282  1.00  0.00              
ATOM    167  C   SER B  42      40.776  78.402  35.964  1.00  0.00              
ATOM    168  O   SER B  42      39.597  78.212  36.241  1.00  0.00              
ATOM    169  N   ALA B  43      41.734  77.474  36.200  1.00  0.00              
ATOM    170  CA  ALA B  43      41.548  76.307  37.046  1.00  0.00              
ATOM    171  C   ALA B  43      41.283  76.748  38.505  1.00  0.00              
ATOM    172  O   ALA B  43      40.343  76.211  39.136  1.00  0.00              
ATOM    173  N   HIS B  44      41.990  77.709  39.135  1.00  0.00              
ATOM    174  CA  HIS B  44      41.647  78.295  40.437  1.00  0.00              
ATOM    175  C   HIS B  44      40.246  78.837  40.427  1.00  0.00              
ATOM    176  O   HIS B  44      39.445  78.524  41.322  1.00  0.00              
ATOM    177  N   PRO B  45      39.829  79.563  39.407  1.00  0.00              
ATOM    178  CA  PRO B  45      38.474  80.062  39.344  1.00  0.00              
ATOM    179  C   PRO B  45      37.373  79.033  39.302  1.00  0.00              
ATOM    180  O   PRO B  45      36.283  79.270  39.884  1.00  0.00              
ATOM    181  N   GLY B  46      37.600  77.923  38.582  1.00  0.00              
ATOM    182  CA  GLY B  46      36.605  76.875  38.412  1.00  0.00              
ATOM    183  C   GLY B  46      36.453  76.154  39.736  1.00  0.00              
ATOM    184  O   GLY B  46      35.321  75.896  40.156  1.00  0.00              
ATOM    185  N   PRO B  47      37.553  75.851  40.445  1.00  0.00              
ATOM    186  CA  PRO B  47      37.479  75.177  41.720  1.00  0.00              
ATOM    187  C   PRO B  47      36.904  76.110  42.751  1.00  0.00              
ATOM    188  O   PRO B  47      36.039  75.672  43.469  1.00  0.00              
ATOM    189  N   ALA B  48      37.347  77.347  42.889  1.00  0.00              
ATOM    190  CA  ALA B  48      36.733  78.336  43.767  1.00  0.00              
ATOM    191  C   ALA B  48      35.259  78.534  43.442  1.00  0.00              
ATOM    192  O   ALA B  48      34.444  78.619  44.363  1.00  0.00              
ATOM    193  N   ALA B  49      34.740  78.563  42.220  1.00  0.00              
ATOM    194  CA  ALA B  49      33.290  78.644  42.041  1.00  0.00              
ATOM    195  C   ALA B  49      32.590  77.296  42.323  1.00  0.00              
ATOM    196  O   ALA B  49      31.357  77.190  42.197  1.00  0.00              
ATOM    197  N   ARG B  50      33.322  76.199  42.636  1.00  0.00              
ATOM    198  CA  ARG B  50      32.630  74.970  42.979  1.00  0.00              
ATOM    199  C   ARG B  50      32.684  73.778  41.996  1.00  0.00              
ATOM    200  O   ARG B  50      31.929  72.796  42.154  1.00  0.00              
ATOM    201  N   SER B  51      33.501  73.795  40.955  1.00  0.00              
ATOM    202  CA  SER B  51      33.608  72.647  40.078  1.00  0.00              
ATOM    203  C   SER B  51      34.342  71.517  40.782  1.00  0.00              
ATOM    204  O   SER B  51      35.141  71.730  41.711  1.00  0.00              
ATOM    205  N   HIS B  52      34.101  70.267  40.394  1.00  0.00              
ATOM    206  CA  HIS B  52      34.833  69.158  41.017  1.00  0.00              
ATOM    207  C   HIS B  52      36.264  68.947  40.498  1.00  0.00              
ATOM    208  O   HIS B  52      37.081  68.202  41.074  1.00  0.00              
ATOM    209  N   THR B  53      36.567  69.534  39.328  1.00  0.00              
ATOM    210  CA  THR B  53      37.884  69.365  38.693  1.00  0.00              
ATOM    211  C   THR B  53      37.962  70.031  37.304  1.00  0.00              
ATOM    212  O   THR B  53      36.999  70.695  36.857  1.00  0.00              
ATOM    213  N   VAL B  54      39.095  69.916  36.595  1.00  0.00              
ATOM    214  CA  VAL B  54      39.196  70.542  35.286  1.00  0.00              
ATOM    215  C   VAL B  54      39.761  69.504  34.338  1.00  0.00              
ATOM    216  O   VAL B  54      40.467  68.605  34.785  1.00  0.00              
ATOM    217  N   ASN B  55      39.389  69.506  33.064  1.00  0.00              
ATOM    218  CA  ASN B  55      40.017  68.708  32.030  1.00  0.00              
ATOM    219  C   ASN B  55      40.839  69.657  31.131  1.00  0.00              
ATOM    220  O   ASN B  55      40.403  70.692  30.632  1.00  0.00              
ATOM    221  N   PRO B  56      42.105  69.328  30.932  1.00  0.00              
ATOM    222  CA  PRO B  56      42.964  70.127  30.092  1.00  0.00              
ATOM    223  C   PRO B  56      42.666  69.649  28.705  1.00  0.00              
ATOM    224  O   PRO B  56      42.846  68.484  28.421  1.00  0.00              
ATOM    225  N   PHE B  57      42.199  70.520  27.792  1.00  0.00              
ATOM    226  CA  PHE B  57      41.908  70.131  26.420  1.00  0.00              
ATOM    227  C   PHE B  57      43.208  70.182  25.664  1.00  0.00              
ATOM    228  O   PHE B  57      43.755  71.237  25.414  1.00  0.00              
END
