REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0065AL215_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0065  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1alo 
ATOM      1  N   TRP B  15      48.815 -23.482  47.494  1.00  0.00              
ATOM      2  CA  TRP B  15      50.074 -22.775  47.713  1.00  0.00              
ATOM      3  C   TRP B  15      49.964 -21.728  48.815  1.00  0.00              
ATOM      4  O   TRP B  15      50.953 -21.422  49.490  1.00  0.00              
ATOM      5  N   VAL B  16      48.771 -21.169  48.988  1.00  0.00              
ATOM      6  CA  VAL B  16      48.555 -20.219  50.064  1.00  0.00              
ATOM      7  C   VAL B  16      48.442 -21.012  51.366  1.00  0.00              
ATOM      8  O   VAL B  16      49.063 -20.653  52.364  1.00  0.00              
ATOM      9  N   GLU B  17      47.704 -22.119  51.338  1.00  0.00              
ATOM     10  CA  GLU B  17      47.544 -22.978  52.517  1.00  0.00              
ATOM     11  C   GLU B  17      48.889 -23.533  53.000  1.00  0.00              
ATOM     12  O   GLU B  17      49.076 -23.750  54.197  1.00  0.00              
ATOM     13  N   LEU B  18      49.797 -23.818  52.072  1.00  0.00              
ATOM     14  CA  LEU B  18      51.109 -24.316  52.452  1.00  0.00              
ATOM     15  C   LEU B  18      51.869 -23.266  53.302  1.00  0.00              
ATOM     16  O   LEU B  18      52.517 -23.629  54.290  1.00  0.00              
ATOM     17  N   MET B  19      51.780 -21.987  52.934  1.00  0.00              
ATOM     18  CA  MET B  19      52.434 -20.907  53.700  1.00  0.00              
ATOM     19  C   MET B  19      51.756 -20.737  55.059  1.00  0.00              
ATOM     20  O   MET B  19      52.399 -20.352  56.036  1.00  0.00              
ATOM     21  N   VAL B  20      50.455 -21.001  55.106  1.00  0.00              
ATOM     22  CA  VAL B  20      49.704 -20.925  56.350  1.00  0.00              
ATOM     23  C   VAL B  20      50.182 -22.037  57.286  1.00  0.00              
ATOM     24  O   VAL B  20      50.317 -21.815  58.490  1.00  0.00              
ATOM     25  N   GLU B  21      50.440 -23.223  56.740  1.00  0.00              
ATOM     26  CA  GLU B  21      50.943 -24.333  57.542  1.00  0.00              
ATOM     27  C   GLU B  21      52.378 -24.023  58.015  1.00  0.00              
ATOM     28  O   GLU B  21      52.715 -24.275  59.173  1.00  0.00              
ATOM     29  N   ALA B  22      53.219 -23.509  57.120  1.00  0.00              
ATOM     30  CA  ALA B  22      54.585 -23.146  57.479  1.00  0.00              
ATOM     31  C   ALA B  22      54.489 -22.179  58.658  1.00  0.00              
ATOM     32  O   ALA B  22      55.136 -22.357  59.684  1.00  0.00              
ATOM     33  N   LYS B  23      53.654 -21.159  58.502  1.00  0.00              
ATOM     34  CA  LYS B  23      53.431 -20.159  59.530  1.00  0.00              
ATOM     35  C   LYS B  23      53.041 -20.812  60.854  1.00  0.00              
ATOM     36  O   LYS B  23      53.665 -20.559  61.884  1.00  0.00              
ATOM     37  N   GLU B  24      52.024 -21.666  60.820  1.00  0.00              
ATOM     38  CA  GLU B  24      51.545 -22.347  62.012  1.00  0.00              
ATOM     39  C   GLU B  24      52.618 -23.220  62.679  1.00  0.00              
ATOM     40  O   GLU B  24      52.642 -23.368  63.904  1.00  0.00              
ATOM     41  N   ALA B  25      53.499 -23.790  61.863  1.00  0.00              
ATOM     42  CA  ALA B  25      54.584 -24.651  62.322  1.00  0.00              
ATOM     43  C   ALA B  25      55.813 -23.859  62.789  1.00  0.00              
ATOM     44  O   ALA B  25      56.623 -24.368  63.567  1.00  0.00              
ATOM     45  N   ASN B  26      55.950 -22.625  62.311  1.00  0.00              
ATOM     46  CA  ASN B  26      57.103 -21.809  62.652  1.00  0.00              
ATOM     47  C   ASN B  26      58.251 -22.193  61.730  1.00  0.00              
ATOM     48  O   ASN B  26      59.425 -22.079  62.079  1.00  0.00              
ATOM     49  N   ILE B  27      57.896 -22.654  60.535  1.00  0.00              
ATOM     50  CA  ILE B  27      58.865 -23.088  59.542  1.00  0.00              
ATOM     51  C   ILE B  27      58.955 -22.108  58.379  1.00  0.00              
ATOM     52  O   ILE B  27      58.045 -21.317  58.139  1.00  0.00              
ATOM     53  N   SER B  28      60.071 -22.165  57.664  1.00  0.00              
ATOM     54  CA  SER B  28      60.281 -21.342  56.485  1.00  0.00              
ATOM     55  C   SER B  28      59.429 -21.997  55.383  1.00  0.00              
ATOM     56  O   SER B  28      59.425 -23.229  55.245  1.00  0.00              
ATOM     57  N   PRO B  29      58.665 -21.190  54.624  1.00  0.00              
ATOM     58  CA  PRO B  29      57.803 -21.681  53.538  1.00  0.00              
ATOM     59  C   PRO B  29      58.573 -22.504  52.502  1.00  0.00              
ATOM     60  O   PRO B  29      58.082 -23.533  52.044  1.00  0.00              
ATOM     61  N   GLU B  30      59.766 -22.045  52.129  1.00  0.00              
ATOM     62  CA  GLU B  30      60.595 -22.765  51.157  1.00  0.00              
ATOM     63  C   GLU B  30      61.027 -24.131  51.710  1.00  0.00              
ATOM     64  O   GLU B  30      60.957 -25.140  51.006  1.00  0.00              
ATOM     65  N   GLU B  31      61.442 -24.164  52.974  1.00  0.00              
ATOM     66  CA  GLU B  31      61.873 -25.408  53.601  1.00  0.00              
ATOM     67  C   GLU B  31      60.726 -26.382  53.757  1.00  0.00              
ATOM     68  O   GLU B  31      60.913 -27.575  53.566  1.00  0.00              
ATOM     69  N   ILE B  32      59.548 -25.887  54.123  1.00  0.00              
ATOM     70  CA  ILE B  32      58.389 -26.764  54.252  1.00  0.00              
ATOM     71  C   ILE B  32      58.128 -27.433  52.887  1.00  0.00              
ATOM     72  O   ILE B  32      57.856 -28.632  52.812  1.00  0.00              
ATOM     73  N   ARG B  33      58.263 -26.664  51.811  1.00  0.00              
ATOM     74  CA  ARG B  33      58.057 -27.196  50.472  1.00  0.00              
ATOM     75  C   ARG B  33      59.143 -28.205  50.083  1.00  0.00              
ATOM     76  O   ARG B  33      58.840 -29.266  49.528  1.00  0.00              
ATOM     77  N   LYS B  34      60.398 -27.874  50.368  1.00  0.00              
ATOM     78  CA  LYS B  34      61.513 -28.753  50.054  1.00  0.00              
ATOM     79  C   LYS B  34      61.335 -30.120  50.714  1.00  0.00              
ATOM     80  O   LYS B  34      61.618 -31.153  50.122  1.00  0.00              
ATOM     81  N   TYR B  35      60.852 -30.105  51.950  1.00  0.00              
ATOM     82  CA  TYR B  35      60.598 -31.305  52.734  1.00  0.00              
ATOM     83  C   TYR B  35      59.544 -32.221  52.096  1.00  0.00              
ATOM     84  O   TYR B  35      59.717 -33.439  52.062  1.00  0.00              
ATOM     85  N   LEU B  36      58.479 -31.626  51.567  1.00  0.00              
ATOM     86  CA  LEU B  36      57.367 -32.370  50.977  1.00  0.00              
ATOM     87  C   LEU B  36      57.336 -32.567  49.467  1.00  0.00              
ATOM     88  O   LEU B  36      56.492 -33.321  48.973  1.00  0.00              
ATOM     89  N   LEU B  37      58.216 -31.888  48.737  1.00  0.00              
ATOM     90  CA  LEU B  37      58.255 -31.974  47.273  1.00  0.00              
ATOM     91  C   LEU B  37      58.445 -33.386  46.711  1.00  0.00              
ATOM     92  O   LEU B  37      59.166 -34.201  47.293  1.00  0.00              
ATOM     93  N   LEU B  38      57.793 -33.671  45.585  1.00  0.00              
ATOM     94  CA  LEU B  38      57.891 -34.983  44.930  1.00  0.00              
ATOM     95  C   LEU B  38      59.321 -35.494  44.826  1.00  0.00              
ATOM     96  O   LEU B  38      60.221 -34.805  44.336  1.00  0.00              
ATOM     97  N   ASN B  39      59.469 -36.772  45.149  1.00  0.00              
ATOM     98  CA  ASN B  39      60.734 -37.488  45.095  1.00  0.00              
ATOM     99  C   ASN B  39      60.349 -38.915  44.723  1.00  0.00              
ATOM    100  O   ASN B  39      59.196 -39.316  44.905  1.00  0.00              
ATOM    101  N   LYS B  40      61.287 -39.684  44.152  1.00  0.00              
ATOM    102  CA  LYS B  40      61.010 -41.069  43.758  1.00  0.00              
ATOM    103  C   LYS B  40      60.282 -41.892  44.831  1.00  0.00              
ATOM    104  O   LYS B  40      60.680 -41.940  46.000  1.00  0.00              
ATOM    105  N   LYS B  41      59.165 -42.480  44.422  1.00  0.00              
ATOM    106  CA  LYS B  41      58.359 -43.283  45.317  1.00  0.00              
ATOM    107  C   LYS B  41      57.039 -42.598  45.617  1.00  0.00              
ATOM    108  O   LYS B  41      56.063 -43.258  45.993  1.00  0.00              
ATOM    109  N   SER B  42      57.006 -41.277  45.459  1.00  0.00              
ATOM    110  CA  SER B  42      55.809 -40.480  45.713  1.00  0.00              
ATOM    111  C   SER B  42      54.828 -40.581  44.565  1.00  0.00              
ATOM    112  O   SER B  42      55.184 -40.984  43.459  1.00  0.00              
ATOM    113  N   ALA B  43      53.584 -40.207  44.835  1.00  0.00              
ATOM    114  CA  ALA B  43      52.548 -40.182  43.811  1.00  0.00              
ATOM    115  C   ALA B  43      51.871 -38.818  43.919  1.00  0.00              
ATOM    116  O   ALA B  43      51.879 -38.200  44.989  1.00  0.00              
ATOM    117  N   HIS B  44      51.362 -38.323  42.796  1.00  0.00              
ATOM    118  CA  HIS B  44      50.663 -37.052  42.756  1.00  0.00              
ATOM    119  C   HIS B  44      49.240 -37.296  43.291  1.00  0.00              
ATOM    120  O   HIS B  44      48.903 -38.435  43.655  1.00  0.00              
ATOM    121  N   PRO B  45      48.395 -36.252  43.364  1.00  0.00              
ATOM    122  CA  PRO B  45      47.024 -36.418  43.879  1.00  0.00              
ATOM    123  C   PRO B  45      46.192 -37.540  43.272  1.00  0.00              
ATOM    124  O   PRO B  45      45.338 -38.101  43.941  1.00  0.00              
ATOM    125  N   GLY B  46      46.418 -37.844  41.998  1.00  0.00              
ATOM    126  CA  GLY B  46      45.648 -38.895  41.351  1.00  0.00              
ATOM    127  C   GLY B  46      46.284 -40.284  41.437  1.00  0.00              
ATOM    128  O   GLY B  46      45.842 -41.219  40.763  1.00  0.00              
ATOM    129  N   PRO B  47      47.299 -40.414  42.288  1.00  0.00              
ATOM    130  CA  PRO B  47      47.970 -41.685  42.474  1.00  0.00              
ATOM    131  C   PRO B  47      49.011 -42.068  41.443  1.00  0.00              
ATOM    132  O   PRO B  47      49.505 -43.192  41.462  1.00  0.00              
ATOM    133  N   ALA B  48      49.369 -41.147  40.558  1.00  0.00              
ATOM    134  CA  ALA B  48      50.360 -41.427  39.529  1.00  0.00              
ATOM    135  C   ALA B  48      51.736 -40.930  39.962  1.00  0.00              
ATOM    136  O   ALA B  48      51.848 -39.879  40.588  1.00  0.00              
ATOM    137  N   ALA B  49      52.778 -41.688  39.642  1.00  0.00              
ATOM    138  CA  ALA B  49      54.129 -41.254  39.979  1.00  0.00              
ATOM    139  C   ALA B  49      54.678 -40.257  38.940  1.00  0.00              
ATOM    140  O   ALA B  49      54.471 -40.428  37.730  1.00  0.00              
ATOM    141  N   ARG B  50      55.302 -39.160  39.403  1.00  0.00              
ATOM    142  CA  ARG B  50      55.877 -38.138  38.515  1.00  0.00              
ATOM    143  C   ARG B  50      56.913 -38.739  37.545  1.00  0.00              
ATOM    144  O   ARG B  50      57.634 -39.670  37.913  1.00  0.00              
ATOM    145  N   SER B  51      56.951 -38.241  36.309  1.00  0.00              
ATOM    146  CA  SER B  51      57.907 -38.721  35.294  1.00  0.00              
ATOM    147  C   SER B  51      59.339 -38.261  35.547  1.00  0.00              
ATOM    148  O   SER B  51      60.284 -38.902  35.103  1.00  0.00              
ATOM    149  N   HIS B  52      59.488 -37.087  36.148  1.00  0.00              
ATOM    150  CA  HIS B  52      60.797 -36.551  36.486  1.00  0.00              
ATOM    151  C   HIS B  52      60.633 -35.981  37.884  1.00  0.00              
ATOM    152  O   HIS B  52      59.505 -35.749  38.340  1.00  0.00              
ATOM    153  N   THR B  53      61.743 -35.831  38.595  1.00  0.00              
ATOM    154  CA  THR B  53      61.694 -35.297  39.943  1.00  0.00              
ATOM    155  C   THR B  53      62.683 -34.139  40.010  1.00  0.00              
ATOM    156  O   THR B  53      63.854 -34.320  40.347  1.00  0.00              
ATOM    157  N   VAL B  54      62.207 -32.952  39.644  1.00  0.00              
ATOM    158  CA  VAL B  54      63.038 -31.751  39.612  1.00  0.00              
ATOM    159  C   VAL B  54      62.708 -30.684  40.649  1.00  0.00              
ATOM    160  O   VAL B  54      63.390 -29.661  40.700  1.00  0.00              
ATOM    161  N   ASN B  55      61.682 -30.900  41.466  1.00  0.00              
ATOM    162  CA  ASN B  55      61.326 -29.889  42.462  1.00  0.00              
ATOM    163  C   ASN B  55      62.406 -29.661  43.535  1.00  0.00              
ATOM    164  O   ASN B  55      62.841 -28.525  43.732  1.00  0.00              
ATOM    165  N   PRO B  56      62.901 -30.732  44.180  1.00  0.00              
ATOM    166  CA  PRO B  56      63.935 -30.526  45.204  1.00  0.00              
ATOM    167  C   PRO B  56      65.153 -29.806  44.614  1.00  0.00              
ATOM    168  O   PRO B  56      65.754 -28.940  45.249  1.00  0.00              
ATOM    169  N   PHE B  57      65.466 -30.139  43.367  1.00  0.00              
ATOM    170  CA  PHE B  57      66.589 -29.573  42.629  1.00  0.00              
ATOM    171  C   PHE B  57      66.424 -28.063  42.397  1.00  0.00              
ATOM    172  O   PHE B  57      67.353 -27.279  42.640  1.00  0.00              
END
