REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0065AL040_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : OLSZEWSKI 
REMARK  ---------------------------------------------------------- 
TARGET T0065  
AUTHOR 2746-8822-4809  
METHOD SEQFOLD(MSI) IMPLEMENTATION OF FOLD RECOGNITION  
METHOD BASED ON FISCHER AND EISENBERG PROT. SCI. 5, 943, 1996  
METHOD GLOBAL-LOCAL SEQUENCE ALIGNEMENT DRIVEN BY PREDICTED  
METHOD SECONDARY STRUCTURE   
METHOD CONSEQUENTLY - MODELS ARE ALWAYS BASED ON SINGLE SEQUENCE  
METHOD NOVEL SIGNIFICANCE ANALYSIS BASED ON RANDOM ALIGNMENTS   
MODEL 1  
REMARK TAR GAP 3  
REMARK TAR GAP 5  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1vnd 
ATOM      1  N   ALA B   4       0.011   5.618  -7.721  1.00  0.00              
ATOM      2  CA  ALA B   4       0.083   5.786  -9.177  1.00  0.00              
ATOM      3  C   ALA B   4       1.192   4.937  -9.780  1.00  0.00              
ATOM      4  O   ALA B   4       1.767   4.103  -9.088  1.00  0.00              
ATOM      5  N   LYS B   5       1.471   5.087 -11.112  1.00  0.00              
ATOM      6  CA  LYS B   5       2.135   4.118 -11.985  1.00  0.00              
ATOM      7  C   LYS B   5       3.642   3.963 -11.854  1.00  0.00              
ATOM      8  O   LYS B   5       4.200   3.019 -12.404  1.00  0.00              
ATOM      9  N   GLN B   6       4.333   4.864 -11.101  1.00  0.00              
ATOM     10  CA  GLN B   6       5.722   4.722 -10.664  1.00  0.00              
ATOM     11  C   GLN B   6       5.840   3.874  -9.400  1.00  0.00              
ATOM     12  O   GLN B   6       6.725   3.021  -9.268  1.00  0.00              
ATOM     13  N   GLU B   7       4.888   4.100  -8.444  1.00  0.00              
ATOM     14  CA  GLU B   7       4.815   3.562  -7.103  1.00  0.00              
ATOM     15  C   GLU B   7       4.359   2.112  -7.110  1.00  0.00              
ATOM     16  O   GLU B   7       4.964   1.259  -6.467  1.00  0.00              
ATOM     17  N   HIS B   8       3.306   1.801  -7.927  1.00  0.00              
ATOM     18  CA  HIS B   8       2.693   0.492  -8.132  1.00  0.00              
ATOM     19  C   HIS B   8       3.575  -0.445  -8.964  1.00  0.00              
ATOM     20  O   HIS B   8       3.530  -1.659  -8.793  1.00  0.00              
ATOM     21  N   PHE B   9       4.454   0.137  -9.840  1.00  0.00              
ATOM     22  CA  PHE B   9       5.447  -0.526 -10.691  1.00  0.00              
ATOM     23  C   PHE B   9       6.566  -1.164  -9.883  1.00  0.00              
ATOM     24  O   PHE B   9       6.850  -2.347 -10.050  1.00  0.00              
ATOM     25  N   GLU B  10       7.209  -0.368  -8.983  1.00  0.00              
ATOM     26  CA  GLU B  10       8.346  -0.789  -8.150  1.00  0.00              
ATOM     27  C   GLU B  10       8.008  -1.755  -7.018  1.00  0.00              
ATOM     28  O   GLU B  10       8.792  -2.655  -6.711  1.00  0.00              
ATOM     29  N   LEU B  11       6.810  -1.602  -6.395  1.00  0.00              
ATOM     30  CA  LEU B  11       6.291  -2.436  -5.312  1.00  0.00              
ATOM     31  C   LEU B  11       5.855  -3.830  -5.729  1.00  0.00              
ATOM     32  O   LEU B  11       6.135  -4.797  -5.027  1.00  0.00              
ATOM     33  N   ASP B  12       5.179  -3.961  -6.903  1.00  0.00              
ATOM     34  CA  ASP B  12       4.812  -5.223  -7.535  1.00  0.00              
ATOM     35  C   ASP B  12       5.971  -6.006  -8.137  1.00  0.00              
ATOM     36  O   ASP B  12       5.922  -7.234  -8.165  1.00  0.00              
ATOM     37  N   GLN B  13       7.044  -5.312  -8.633  1.00  0.00              
ATOM     38  CA  GLN B  13       8.210  -5.928  -9.263  1.00  0.00              
ATOM     39  C   GLN B  13       9.214  -6.520  -8.296  1.00  0.00              
ATOM     40  O   GLN B  13       9.897  -7.490  -8.621  1.00  0.00              
ATOM     41  N   GLU B  14       9.264  -5.966  -7.046  1.00  0.00              
ATOM     42  CA  GLU B  14       9.908  -6.604  -5.888  1.00  0.00              
ATOM     43  C   GLU B  14       9.044  -7.691  -5.250  1.00  0.00              
ATOM     44  O   GLU B  14       9.593  -8.609  -4.657  1.00  0.00              
ATOM     45  N   TRP B  15       7.679  -7.641  -5.347  1.00  0.00              
ATOM     46  CA  TRP B  15       6.762  -8.660  -4.805  1.00  0.00              
ATOM     47  C   TRP B  15       6.731  -9.975  -5.606  1.00  0.00              
ATOM     48  O   TRP B  15       6.308 -11.006  -5.083  1.00  0.00              
ATOM     49  N   VAL B  16       7.217  -9.968  -6.882  1.00  0.00              
ATOM     50  CA  VAL B  16       7.372 -11.138  -7.750  1.00  0.00              
ATOM     51  C   VAL B  16       8.679 -11.893  -7.495  1.00  0.00              
ATOM     52  O   VAL B  16       8.658 -13.119  -7.401  1.00  0.00              
ATOM     53  N   GLU B  17       9.847 -11.191  -7.383  1.00  0.00              
ATOM     54  CA  GLU B  17      11.177 -11.721  -7.254  1.00  0.00              
ATOM     55  C   GLU B  17      11.605 -11.919  -5.801  1.00  0.00              
ATOM     56  O   GLU B  17      12.482 -12.738  -5.528  1.00  0.00              
ATOM     57  N   LEU B  18      12.552  -7.409   2.089  1.00  0.00              
ATOM     58  CA  LEU B  18      13.578  -6.475   1.698  1.00  0.00              
ATOM     59  C   LEU B  18      13.919  -5.746   2.971  1.00  0.00              
ATOM     60  O   LEU B  18      13.057  -5.136   3.602  1.00  0.00              
ATOM     61  N   MET B  19      15.225  -5.832   3.383  1.00  0.00              
ATOM     62  CA  MET B  19      15.804  -5.351   4.634  1.00  0.00              
ATOM     63  C   MET B  19      16.170  -3.878   4.541  1.00  0.00              
ATOM     64  O   MET B  19      16.265  -3.343   3.441  1.00  0.00              
ATOM     65  N   VAL B  20      16.381  -3.210   5.715  1.00  0.00              
ATOM     66  CA  VAL B  20      16.553  -1.772   5.947  1.00  0.00              
ATOM     67  C   VAL B  20      17.576  -0.971   5.135  1.00  0.00              
ATOM     68  O   VAL B  20      17.233   0.159   4.794  1.00  0.00              
ATOM     69  N   GLU B  21      18.795  -1.424   4.738  1.00  0.00              
ATOM     70  CA  GLU B  21      19.716  -0.666   3.872  1.00  0.00              
ATOM     71  C   GLU B  21      19.226  -0.472   2.430  1.00  0.00              
ATOM     72  O   GLU B  21      19.584   0.533   1.818  1.00  0.00              
ATOM     73  N   ALA B  22      18.411  -1.429   1.908  1.00  0.00              
ATOM     74  CA  ALA B  22      17.812  -1.432   0.581  1.00  0.00              
ATOM     75  C   ALA B  22      16.320  -1.086   0.544  1.00  0.00              
ATOM     76  O   ALA B  22      15.822  -0.721  -0.522  1.00  0.00              
ATOM     77  N   LYS B  23      15.558  -1.143   1.688  1.00  0.00              
ATOM     78  CA  LYS B  23      14.136  -0.802   1.801  1.00  0.00              
ATOM     79  C   LYS B  23      13.916   0.695   1.970  1.00  0.00              
ATOM     80  O   LYS B  23      12.966   1.255   1.425  1.00  0.00              
ATOM     81  N   GLU B  24      14.818   1.379   2.736  1.00  0.00              
ATOM     82  CA  GLU B  24      14.834   2.815   3.001  1.00  0.00              
ATOM     83  C   GLU B  24      15.393   3.613   1.832  1.00  0.00              
ATOM     84  O   GLU B  24      15.109   4.800   1.681  1.00  0.00              
ATOM     85  N   ALA B  25      16.174   2.921   0.953  1.00  0.00              
ATOM     86  CA  ALA B  25      16.762   3.386  -0.286  1.00  0.00              
ATOM     87  C   ALA B  25      15.758   3.353  -1.425  1.00  0.00              
ATOM     88  O   ALA B  25      15.838   4.167  -2.339  1.00  0.00              
ATOM     89  N   ASN B  26       9.973   8.120  -3.228  1.00  0.00              
ATOM     90  CA  ASN B  26       9.462   9.236  -2.440  1.00  0.00              
ATOM     91  C   ASN B  26       8.239   8.889  -1.605  1.00  0.00              
ATOM     92  O   ASN B  26       7.141   9.378  -1.867  1.00  0.00              
ATOM     93  N   ILE B  27       8.416   8.038  -0.559  1.00  0.00              
ATOM     94  CA  ILE B  27       7.394   7.740   0.430  1.00  0.00              
ATOM     95  C   ILE B  27       8.067   7.672   1.788  1.00  0.00              
ATOM     96  O   ILE B  27       9.250   7.979   1.929  1.00  0.00              
ATOM     97  N   SER B  28       7.285   7.243   2.829  1.00  0.00              
ATOM     98  CA  SER B  28       7.674   7.077   4.223  1.00  0.00              
ATOM     99  C   SER B  28       8.088   5.612   4.449  1.00  0.00              
ATOM    100  O   SER B  28       7.506   4.719   3.822  1.00  0.00              
ATOM    101  N   PRO B  29       9.031   5.323   5.388  1.00  0.00              
ATOM    102  CA  PRO B  29       9.410   3.987   5.860  1.00  0.00              
ATOM    103  C   PRO B  29       8.305   3.123   6.467  1.00  0.00              
ATOM    104  O   PRO B  29       8.439   1.902   6.424  1.00  0.00              
ATOM    105  N   GLU B  30       7.207   3.725   7.010  1.00  0.00              
ATOM    106  CA  GLU B  30       6.142   3.035   7.717  1.00  0.00              
ATOM    107  C   GLU B  30       5.044   2.576   6.765  1.00  0.00              
ATOM    108  O   GLU B  30       4.397   1.565   7.033  1.00  0.00              
ATOM    109  N   GLU B  31       4.820   3.282   5.611  1.00  0.00              
ATOM    110  CA  GLU B  31       3.829   2.921   4.609  1.00  0.00              
ATOM    111  C   GLU B  31       4.335   1.856   3.650  1.00  0.00              
ATOM    112  O   GLU B  31       3.559   1.005   3.215  1.00  0.00              
ATOM    113  N   ILE B  32       5.682   1.838   3.359  1.00  0.00              
ATOM    114  CA  ILE B  32       6.371   0.780   2.602  1.00  0.00              
ATOM    115  C   ILE B  32       6.456  -0.555   3.362  1.00  0.00              
ATOM    116  O   ILE B  32       6.171  -1.614   2.792  1.00  0.00              
ATOM    117  N   ARG B  33       6.785  -0.518   4.696  1.00  0.00              
ATOM    118  CA  ARG B  33       6.834  -1.655   5.622  1.00  0.00              
ATOM    119  C   ARG B  33       5.519  -2.409   5.790  1.00  0.00              
ATOM    120  O   ARG B  33       5.490  -3.637   5.710  1.00  0.00              
ATOM    121  N   LYS B  34       4.389  -1.661   5.982  1.00  0.00              
ATOM    122  CA  LYS B  34       3.041  -2.218   6.097  1.00  0.00              
ATOM    123  C   LYS B  34       2.346  -2.476   4.756  1.00  0.00              
ATOM    124  O   LYS B  34       1.290  -3.101   4.749  1.00  0.00              
ATOM    125  N   TYR B  35       2.933  -2.065   3.576  1.00  0.00              
ATOM    126  CA  TYR B  35       2.528  -2.501   2.230  1.00  0.00              
ATOM    127  C   TYR B  35       2.925  -3.952   1.971  1.00  0.00              
ATOM    128  O   TYR B  35       2.128  -4.721   1.438  1.00  0.00              
ATOM    129  N   LEU B  36       4.174  -4.351   2.374  1.00  0.00              
ATOM    130  CA  LEU B  36       4.715  -5.711   2.240  1.00  0.00              
ATOM    131  C   LEU B  36       4.219  -6.672   3.307  1.00  0.00              
ATOM    132  O   LEU B  36       4.316  -7.884   3.131  1.00  0.00              
ATOM    133  N   LEU B  37       3.639  -6.137   4.418  1.00  0.00              
ATOM    134  CA  LEU B  37       2.932  -6.852   5.476  1.00  0.00              
ATOM    135  C   LEU B  37       1.527  -7.283   5.064  1.00  0.00              
ATOM    136  O   LEU B  37       1.071  -8.370   5.416  1.00  0.00              
ATOM    137  N   LEU B  38       0.811  -6.404   4.303  1.00  0.00              
ATOM    138  CA  LEU B  38      -0.586  -6.545   3.906  1.00  0.00              
ATOM    139  C   LEU B  38      -0.761  -7.332   2.613  1.00  0.00              
ATOM    140  O   LEU B  38      -1.847  -7.845   2.347  1.00  0.00              
ATOM    141  N   ASN B  39       0.316  -7.446   1.782  1.00  0.00              
ATOM    142  CA  ASN B  39       0.368  -8.181   0.523  1.00  0.00              
ATOM    143  C   ASN B  39       0.566  -9.695   0.673  1.00  0.00              
ATOM    144  O   ASN B  39       0.143 -10.452  -0.199  1.00  0.00              
ATOM    145  N   LYS B  40       1.212 -10.167   1.780  1.00  0.00              
ATOM    146  CA  LYS B  40       1.349 -11.562   2.208  1.00  0.00              
ATOM    147  C   LYS B  40       0.175 -12.059   3.061  1.00  0.00              
ATOM    148  O   LYS B  40       0.410 -12.601   4.140  1.00  0.00              
ATOM    149  N   LYS B  41      -1.122 -11.887   2.638  1.00  0.00              
ATOM    150  CA  LYS B  41      -2.257 -12.082   3.508  1.00  0.00              
ATOM    151  C   LYS B  41      -3.433 -12.659   2.762  1.00  0.00              
ATOM    152  O   LYS B  41      -4.546 -12.152   2.892  1.00  0.00              
ATOM    153  N   SER B  42      -3.216 -13.758   1.972  1.00  0.00              
ATOM    154  CA  SER B  42      -4.244 -14.606   1.291  1.00  0.00              
ATOM    155  C   SER B  42      -5.170 -13.838   0.337  1.00  0.00              
ATOM    156  O   SER B  42      -6.396 -13.913   0.395  1.00  0.00              
ATOM    157  N   ALA B  43      -4.517 -12.988  -0.509  1.00  0.00              
ATOM    158  CA  ALA B  43      -4.963 -11.644  -0.870  1.00  0.00              
ATOM    159  C   ALA B  43      -5.942 -11.514  -2.017  1.00  0.00              
ATOM    160  O   ALA B  43      -6.600 -10.480  -2.124  1.00  0.00              
ATOM    161  N   HIS B  44      -6.054 -12.539  -2.914  1.00  0.00              
ATOM    162  CA  HIS B  44      -6.875 -12.542  -4.122  1.00  0.00              
ATOM    163  C   HIS B  44      -8.321 -12.978  -3.887  1.00  0.00              
ATOM    164  O   HIS B  44      -8.840 -13.865  -4.562  1.00  0.00              
ATOM    165  N   PRO B  45      -8.983 -12.300  -2.915  1.00  0.00              
ATOM    166  CA  PRO B  45     -10.374 -12.396  -2.526  1.00  0.00              
ATOM    167  C   PRO B  45     -10.497 -11.345  -1.446  1.00  0.00              
ATOM    168  O   PRO B  45      -9.490 -10.793  -1.001  1.00  0.00              
ATOM    169  N   GLY B  46     -11.740 -11.040  -0.960  1.00  0.00              
ATOM    170  CA  GLY B  46     -12.007 -10.060   0.090  1.00  0.00              
ATOM    171  C   GLY B  46     -11.976 -10.649   1.487  1.00  0.00              
ATOM    172  O   GLY B  46     -12.422 -10.021   2.446  1.00  0.00              
ATOM    173  N   PRO B  47     -11.377 -11.864   1.626  1.00  0.00              
ATOM    174  CA  PRO B  47     -10.929 -12.450   2.873  1.00  0.00              
ATOM    175  C   PRO B  47      -9.464 -12.115   3.018  1.00  0.00              
ATOM    176  O   PRO B  47      -8.562 -12.871   2.666  1.00  0.00              
ATOM    177  N   ALA B  48      -9.272 -10.897   3.545  1.00  0.00              
ATOM    178  CA  ALA B  48      -8.012 -10.240   3.804  1.00  0.00              
ATOM    179  C   ALA B  48      -8.259  -9.570   5.132  1.00  0.00              
ATOM    180  O   ALA B  48      -8.342  -8.352   5.244  1.00  0.00              
ATOM    181  N   ALA B  49      -8.427 -10.419   6.172  1.00  0.00              
ATOM    182  CA  ALA B  49      -8.821 -10.140   7.556  1.00  0.00              
ATOM    183  C   ALA B  49      -8.121  -9.035   8.379  1.00  0.00              
ATOM    184  O   ALA B  49      -8.826  -8.112   8.785  1.00  0.00              
ATOM    185  N   ARG B  50      -6.774  -9.039   8.664  1.00  0.00              
ATOM    186  CA  ARG B  50      -6.108  -7.974   9.392  1.00  0.00              
ATOM    187  C   ARG B  50      -5.078  -7.394   8.461  1.00  0.00              
ATOM    188  O   ARG B  50      -4.203  -8.098   7.958  1.00  0.00              
ATOM    189  N   SER B  51      -5.190  -6.061   8.217  1.00  0.00              
ATOM    190  CA  SER B  51      -4.338  -5.268   7.355  1.00  0.00              
ATOM    191  C   SER B  51      -4.806  -5.299   5.925  1.00  0.00              
ATOM    192  O   SER B  51      -4.162  -5.913   5.079  1.00  0.00              
ATOM    193  N   HIS B  52      -5.953  -4.634   5.626  1.00  0.00              
ATOM    194  CA  HIS B  52      -6.541  -4.474   4.342  1.00  0.00              
ATOM    195  C   HIS B  52      -6.956  -3.034   4.217  1.00  0.00              
ATOM    196  O   HIS B  52      -7.856  -2.534   4.886  1.00  0.00              
ATOM    197  N   THR B  53      -6.221  -2.371   3.317  1.00  0.00              
ATOM    198  CA  THR B  53      -6.282  -1.003   2.860  1.00  0.00              
ATOM    199  C   THR B  53      -6.726  -1.007   1.414  1.00  0.00              
ATOM    200  O   THR B  53      -5.950  -0.701   0.509  1.00  0.00              
ATOM    201  N   VAL B  54      -8.015  -1.374   1.178  1.00  0.00              
ATOM    202  CA  VAL B  54      -8.646  -1.501  -0.124  1.00  0.00              
ATOM    203  C   VAL B  54      -8.737  -2.960  -0.474  1.00  0.00              
ATOM    204  O   VAL B  54      -9.611  -3.674   0.014  1.00  0.00              
ATOM    205  N   ASN B  55      -7.786  -3.426  -1.323  1.00  0.00              
ATOM    206  CA  ASN B  55      -7.597  -4.814  -1.687  1.00  0.00              
ATOM    207  C   ASN B  55      -6.105  -4.940  -1.951  1.00  0.00              
ATOM    208  O   ASN B  55      -5.702  -4.810  -3.107  1.00  0.00              
ATOM    209  N   PRO B  56      -5.232  -5.167  -0.951  1.00  0.00              
ATOM    210  CA  PRO B  56      -3.790  -5.232  -1.143  1.00  0.00              
ATOM    211  C   PRO B  56      -3.418  -6.637  -1.603  1.00  0.00              
ATOM    212  O   PRO B  56      -3.566  -6.932  -2.822  1.00  0.00              
END
