REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0064AL277_1_2 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : DEERFIELD 
REMARK  ---------------------------------------------------------- 
TARGET T0064  
AUTHOR 8120-3487-1357  
REMARK Matrix Used: 2cro BS_30_25%  
REMARK Matrix Used: 1al8 BS_90_10%   
REMARK Alignment Method Used: Quasi-Global Dynamic Programming  
METHOD Sequence-Structure alignment based on the environments  
METHOD published in: Deerfield, Holland-Minkley, Geigel, and   
METHOD Nicholas 1997. "Classification of the Environment of   
METHOD Protein Residues" J. Prot. Chem. 16:441-446.  
METHOD   
METHOD This test uses our latest (unpublished) environment   
METHOD classifications and extentions.  
MODEL  1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1al8 
ATOM      1  N   GLU A  64      17.319  47.345 -17.370  1.00  0.00              
ATOM      2  CA  GLU A  64      17.921  47.832 -16.142  1.00  0.00              
ATOM      3  C   GLU A  64      17.681  46.845 -15.015  1.00  0.00              
ATOM      4  O   GLU A  64      16.556  46.689 -14.545  1.00  0.00              
ATOM      5  N   LYS A  65      18.733  46.127 -14.646  1.00  0.00              
ATOM      6  CA  LYS A  65      18.667  45.162 -13.561  1.00  0.00              
ATOM      7  C   LYS A  65      19.053  45.821 -12.235  1.00  0.00              
ATOM      8  O   LYS A  65      18.711  45.326 -11.163  1.00  0.00              
ATOM      9  N   HIS A  66      19.772  46.937 -12.313  1.00  0.00              
ATOM     10  CA  HIS A  66      20.175  47.642 -11.114  1.00  0.00              
ATOM     11  C   HIS A  66      20.341  49.127 -11.357  1.00  0.00              
ATOM     12  O   HIS A  66      20.472  49.581 -12.492  1.00  0.00              
ATOM     13  N   GLU A  67      20.363  49.865 -10.257  1.00  0.00              
ATOM     14  CA  GLU A  67      20.458  51.319 -10.245  1.00  0.00              
ATOM     15  C   GLU A  67      21.569  51.981 -11.045  1.00  0.00              
ATOM     16  O   GLU A  67      21.339  52.986 -11.717  1.00  0.00              
ATOM     17  N   THR A  68      22.774  51.437 -10.960  1.00  0.00              
ATOM     18  CA  THR A  68      23.913  52.024 -11.656  1.00  0.00              
ATOM     19  C   THR A  68      23.779  52.042 -13.163  1.00  0.00              
ATOM     20  O   THR A  68      24.430  52.837 -13.842  1.00  0.00              
ATOM     21  N   GLU A  69      22.903  51.197 -13.686  1.00  0.00              
ATOM     22  CA  GLU A  69      22.700  51.134 -15.123  1.00  0.00              
ATOM     23  C   GLU A  69      21.991  52.362 -15.675  1.00  0.00              
ATOM     24  O   GLU A  69      22.258  52.775 -16.804  1.00  0.00              
ATOM     25  N   TYR A  70      21.140  52.979 -14.860  1.00  0.00              
ATOM     26  CA  TYR A  70      20.431  54.183 -15.272  1.00  0.00              
ATOM     27  C   TYR A  70      21.418  55.265 -15.655  1.00  0.00              
ATOM     28  O   TYR A  70      21.139  56.103 -16.499  1.00  0.00              
ATOM     29  N   ASP A  71      22.588  55.221 -15.038  1.00  0.00              
ATOM     30  CA  ASP A  71      23.628  56.193 -15.304  1.00  0.00              
ATOM     31  C   ASP A  71      24.110  56.144 -16.757  1.00  0.00              
ATOM     32  O   ASP A  71      24.324  57.186 -17.386  1.00  0.00              
ATOM     33  N   GLY A  72      24.260  54.934 -17.289  1.00  0.00              
ATOM     34  CA  GLY A  72      24.712  54.756 -18.665  1.00  0.00              
ATOM     35  C   GLY A  72      23.653  55.261 -19.622  1.00  0.00              
ATOM     36  O   GLY A  72      23.966  55.929 -20.598  1.00  0.00              
ATOM     37  N   GLN A  73      22.399  54.939 -19.332  1.00  0.00              
ATOM     38  CA  GLN A  73      21.279  55.372 -20.154  1.00  0.00              
ATOM     39  C   GLN A  73      21.112  56.884 -20.102  1.00  0.00              
ATOM     40  O   GLN A  73      20.865  57.519 -21.128  1.00  0.00              
ATOM     41  N   LEU A  74      21.241  57.463 -18.914  1.00  0.00              
ATOM     42  CA  LEU A  74      21.121  58.903 -18.780  1.00  0.00              
ATOM     43  C   LEU A  74      22.252  59.576 -19.562  1.00  0.00              
ATOM     44  O   LEU A  74      22.040  60.579 -20.236  1.00  0.00              
ATOM     45  N   ASP A  75      23.447  59.001 -19.478  1.00  0.00              
ATOM     46  CA  ASP A  75      24.629  59.520 -20.162  1.00  0.00              
ATOM     47  C   ASP A  75      24.430  59.532 -21.681  1.00  0.00              
ATOM     48  O   ASP A  75      24.929  60.418 -22.382  1.00  0.00              
ATOM     49  N   SER A  76      23.713  58.532 -22.182  1.00  0.00              
ATOM     50  CA  SER A  76      23.431  58.422 -23.602  1.00  0.00              
ATOM     51  C   SER A  76      22.526  59.541 -24.090  1.00  0.00              
ATOM     52  O   SER A  76      22.821  60.175 -25.099  1.00  0.00              
ATOM     53  N   GLU A  77      21.445  59.805 -23.358  1.00  0.00              
ATOM     54  CA  GLU A  77      20.485  60.833 -23.758  1.00  0.00              
ATOM     55  C   GLU A  77      20.667  62.284 -23.301  1.00  0.00              
ATOM     56  O   GLU A  77      20.016  63.190 -23.831  1.00  0.00              
ATOM     57  N   TRP A  78      21.523  62.517 -22.316  1.00  0.00              
ATOM     58  CA  TRP A  78      21.747  63.871 -21.824  1.00  0.00              
ATOM     59  C   TRP A  78      22.922  64.539 -22.492  1.00  0.00              
ATOM     60  O   TRP A  78      23.842  63.871 -22.960  1.00  0.00              
ATOM     61  N   GLU A  79      22.864  65.873 -22.626  1.00  0.00              
ATOM     62  CA  GLU A  79      23.967  66.620 -23.228  1.00  0.00              
ATOM     63  C   GLU A  79      25.180  66.380 -22.322  1.00  0.00              
ATOM     64  O   GLU A  79      25.037  66.292 -21.096  1.00  0.00              
ATOM     65  N   LYS A  80      26.361  66.289 -22.918  1.00  0.00              
ATOM     66  CA  LYS A  80      27.593  66.042 -22.169  1.00  0.00              
ATOM     67  C   LYS A  80      27.752  66.965 -20.962  1.00  0.00              
ATOM     68  O   LYS A  80      28.022  66.504 -19.859  1.00  0.00              
ATOM     69  N   LEU A  81      27.583  68.264 -21.173  1.00  0.00              
ATOM     70  CA  LEU A  81      27.717  69.225 -20.090  1.00  0.00              
ATOM     71  C   LEU A  81      26.818  68.928 -18.901  1.00  0.00              
ATOM     72  O   LEU A  81      27.229  69.087 -17.753  1.00  0.00              
ATOM     73  N   VAL A  82      25.591  68.506 -19.184  1.00  0.00              
ATOM     74  CA  VAL A  82      24.637  68.207 -18.137  1.00  0.00              
ATOM     75  C   VAL A  82      25.018  66.930 -17.415  1.00  0.00              
ATOM     76  O   VAL A  82      25.074  66.924 -16.187  1.00  0.00              
ATOM     77  N   ARG A  83      25.323  65.864 -18.150  1.00  0.00              
ATOM     78  CA  ARG A  83      25.703  64.622 -17.490  1.00  0.00              
ATOM     79  C   ARG A  83      26.952  64.799 -16.616  1.00  0.00              
ATOM     80  O   ARG A  83      26.992  64.323 -15.478  1.00  0.00              
ATOM     81  N   ASP A  84      27.972  65.459 -17.164  1.00  0.00              
ATOM     82  CA  ASP A  84      29.223  65.707 -16.444  1.00  0.00              
ATOM     83  C   ASP A  84      28.976  66.483 -15.157  1.00  0.00              
ATOM     84  O   ASP A  84      29.599  66.223 -14.135  1.00  0.00              
ATOM     85  N   ALA A  85      28.068  67.448 -15.225  1.00  0.00              
ATOM     86  CA  ALA A  85      27.716  68.266 -14.077  1.00  0.00              
ATOM     87  C   ALA A  85      27.076  67.395 -12.995  1.00  0.00              
ATOM     88  O   ALA A  85      27.395  67.531 -11.818  1.00  0.00              
ATOM     89  N   MET A  86      26.199  66.486 -13.408  1.00  0.00              
ATOM     90  CA  MET A  86      25.517  65.587 -12.489  1.00  0.00              
ATOM     91  C   MET A  86      26.441  64.622 -11.764  1.00  0.00              
ATOM     92  O   MET A  86      26.379  64.487 -10.549  1.00  0.00              
ATOM     93  N   THR A  87      27.262  63.928 -12.542  1.00  0.00              
ATOM     94  CA  THR A  87      28.173  62.895 -12.057  1.00  0.00              
ATOM     95  C   THR A  87      29.432  63.341 -11.336  1.00  0.00              
ATOM     96  O   THR A  87      30.010  62.585 -10.563  1.00  0.00              
ATOM     97  N   SER A  88      29.855  64.559 -11.629  1.00  0.00              
ATOM     98  CA  SER A  88      31.066  65.150 -11.097  1.00  0.00              
ATOM     99  C   SER A  88      31.226  65.263  -9.576  1.00  0.00              
ATOM    100  O   SER A  88      30.267  65.473  -8.834  1.00  0.00              
ATOM    101  N   GLY A  89      32.477  65.169  -9.143  1.00  0.00              
ATOM    102  CA  GLY A  89      32.826  65.318  -7.743  1.00  0.00              
ATOM    103  C   GLY A  89      33.676  66.577  -7.685  1.00  0.00              
ATOM    104  O   GLY A  89      33.603  67.404  -8.588  1.00  0.00              
ATOM    105  N   VAL A  90      34.474  66.747  -6.641  1.00  0.00              
ATOM    106  CA  VAL A  90      35.324  67.919  -6.533  1.00  0.00              
ATOM    107  C   VAL A  90      36.764  67.580  -6.868  1.00  0.00              
ATOM    108  O   VAL A  90      37.233  66.493  -6.574  1.00  0.00              
ATOM    109  N   SER A  91      37.455  68.512  -7.513  1.00  0.00              
ATOM    110  CA  SER A  91      38.868  68.348  -7.867  1.00  0.00              
ATOM    111  C   SER A  91      39.207  67.004  -8.524  1.00  0.00              
ATOM    112  O   SER A  91      38.662  66.676  -9.583  1.00  0.00              
ATOM    113  N   LYS A  92      40.104  66.242  -7.891  1.00  0.00              
ATOM    114  CA  LYS A  92      40.548  64.934  -8.375  1.00  0.00              
ATOM    115  C   LYS A  92      39.441  63.890  -8.354  1.00  0.00              
ATOM    116  O   LYS A  92      39.602  62.802  -8.903  1.00  0.00              
ATOM    117  N   LYS A  93      38.346  64.198  -7.667  1.00  0.00              
ATOM    118  CA  LYS A  93      37.214  63.282  -7.570  1.00  0.00              
ATOM    119  C   LYS A  93      37.578  61.999  -6.819  1.00  0.00              
ATOM    120  O   LYS A  93      36.988  60.939  -7.030  1.00  0.00              
ATOM    121  N   GLN A  94      38.546  62.114  -5.920  1.00  0.00              
ATOM    122  CA  GLN A  94      38.980  60.991  -5.111  1.00  0.00              
ATOM    123  C   GLN A  94      37.853  60.515  -4.185  1.00  0.00              
ATOM    124  O   GLN A  94      37.610  59.319  -4.047  1.00  0.00              
ATOM    125  N   PHE A  95      37.182  61.460  -3.532  1.00  0.00              
ATOM    126  CA  PHE A  95      36.094  61.135  -2.617  1.00  0.00              
ATOM    127  C   PHE A  95      34.860  60.607  -3.346  1.00  0.00              
ATOM    128  O   PHE A  95      34.120  59.780  -2.803  1.00  0.00              
ATOM    129  N   ARG A  96      34.648  61.075  -4.575  1.00  0.00              
ATOM    130  CA  ARG A  96      33.513  60.628  -5.377  1.00  0.00              
ATOM    131  C   ARG A  96      33.609  59.110  -5.499  1.00  0.00              
ATOM    132  O   ARG A  96      32.656  58.384  -5.226  1.00  0.00              
ATOM    133  N   GLU A  97      34.792  58.634  -5.856  1.00  0.00              
ATOM    134  CA  GLU A  97      35.034  57.204  -5.992  1.00  0.00              
ATOM    135  C   GLU A  97      34.924  56.514  -4.634  1.00  0.00              
ATOM    136  O   GLU A  97      34.282  55.471  -4.518  1.00  0.00              
ATOM    137  N   PHE A  98      35.536  57.106  -3.607  1.00  0.00              
ATOM    138  CA  PHE A  98      35.503  56.547  -2.250  1.00  0.00              
ATOM    139  C   PHE A  98      34.111  56.311  -1.689  1.00  0.00              
ATOM    140  O   PHE A  98      33.868  55.293  -1.043  1.00  0.00              
ATOM    141  N   LEU A  99      33.211  57.263  -1.918  1.00  0.00              
ATOM    142  CA  LEU A  99      31.830  57.158  -1.451  1.00  0.00              
ATOM    143  C   LEU A  99      31.228  55.843  -1.915  1.00  0.00              
ATOM    144  O   LEU A  99      30.333  55.304  -1.274  1.00  0.00              
ATOM    145  N   ASP A 100      31.718  55.344  -3.047  1.00  0.00              
ATOM    146  CA  ASP A 100      31.262  54.083  -3.609  1.00  0.00              
ATOM    147  C   ASP A 100      32.164  52.922  -3.184  1.00  0.00              
ATOM    148  O   ASP A 100      31.693  51.921  -2.646  1.00  0.00              
ATOM    149  N   TYR A 101      33.465  53.067  -3.413  1.00  0.00              
ATOM    150  CA  TYR A 101      34.435  52.029  -3.082  1.00  0.00              
ATOM    151  C   TYR A 101      34.430  51.541  -1.635  1.00  0.00              
ATOM    152  O   TYR A 101      34.611  50.348  -1.377  1.00  0.00              
ATOM    153  N   GLN A 102      34.281  52.469  -0.692  1.00  0.00              
ATOM    154  CA  GLN A 102      34.306  52.127   0.719  1.00  0.00              
ATOM    155  C   GLN A 102      33.256  51.099   1.133  1.00  0.00              
ATOM    156  O   GLN A 102      33.496  50.303   2.039  1.00  0.00              
ATOM    157  N   LYS A 103      32.113  51.075   0.459  1.00  0.00              
ATOM    158  CA  LYS A 103      31.075  50.097   0.790  1.00  0.00              
ATOM    159  C   LYS A 103      31.538  48.671   0.509  1.00  0.00              
ATOM    160  O   LYS A 103      31.033  47.725   1.107  1.00  0.00              
ATOM    161  N   TRP A 104      32.484  48.520  -0.416  1.00  0.00              
ATOM    162  CA  TRP A 104      33.006  47.210  -0.785  1.00  0.00              
ATOM    163  C   TRP A 104      34.129  46.703   0.107  1.00  0.00              
ATOM    164  O   TRP A 104      34.609  45.586  -0.075  1.00  0.00              
ATOM    165  N   ARG A 105      34.565  47.528   1.052  1.00  0.00              
ATOM    166  CA  ARG A 105      35.606  47.122   1.993  1.00  0.00              
ATOM    167  C   ARG A 105      34.984  46.649   3.310  1.00  0.00              
ATOM    168  O   ARG A 105      35.675  46.478   4.303  1.00  0.00              
ATOM    169  N   LYS A 106      33.665  46.490   3.309  1.00  0.00              
ATOM    170  CA  LYS A 106      32.908  46.031   4.469  1.00  0.00              
ATOM    171  C   LYS A 106      32.299  44.674   4.091  1.00  0.00              
ATOM    172  O   LYS A 106      31.575  44.571   3.092  1.00  0.00              
ATOM    173  N   SER A 107      32.612  43.639   4.868  1.00  0.00              
ATOM    174  CA  SER A 107      32.108  42.297   4.588  1.00  0.00              
ATOM    175  C   SER A 107      30.911  41.925   5.437  1.00  0.00              
ATOM    176  O   SER A 107      30.650  42.546   6.456  1.00  0.00              
ATOM    177  N   GLN A 108      30.170  40.918   4.995  1.00  0.00              
ATOM    178  CA  GLN A 108      29.013  40.450   5.731  1.00  0.00              
ATOM    179  C   GLN A 108      29.419  39.297   6.614  1.00  0.00              
ATOM    180  O   GLN A 108      30.381  38.586   6.317  1.00  0.00              
ATOM    181  N   LYS A 109      28.685  39.134   7.712  1.00  0.00              
ATOM    182  CA  LYS A 109      28.881  38.030   8.648  1.00  0.00              
ATOM    183  C   LYS A 109      27.471  37.477   8.841  1.00  0.00              
ATOM    184  O   LYS A 109      26.806  37.773   9.845  1.00  0.00              
ATOM    185  N   GLU A 110      26.978  36.707   7.849  1.00  0.00              
ATOM    186  CA  GLU A 110      25.643  36.107   7.874  1.00  0.00              
ATOM    187  C   GLU A 110      25.423  35.105   9.001  1.00  0.00              
ATOM    188  O   GLU A 110      26.337  34.369   9.404  1.00  0.00              
ATOM    189  N   GLU A 111      24.189  35.071   9.483  1.00  0.00              
ATOM    190  CA  GLU A 111      23.787  34.155  10.528  1.00  0.00              
ATOM    191  C   GLU A 111      22.879  33.134   9.863  1.00  0.00              
ATOM    192  O   GLU A 111      22.100  33.470   8.962  1.00  0.00              
END
