REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0061AL019_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : UCSC-COMPBIO 
REMARK  ---------------------------------------------------------- 
TARGET T0061  
AUTHOR 9070-5088-8627  
REMARK   
REMARK Prediction date: Monday June 22, 1998  
REMARK Group name: UCSC-compbio  
REMARK Authors: Christian Barrett, Melissa Cline, Mark Diekens, Leslie Grate,  
REMARK 	 Kevin Karplus, David Haussler and Richard Hughey  
REMARK University of California, Santa Cruz  
REMARK   
METHOD Overview  
METHOD   
METHOD Fold recognition was performed using the Target98 (SAM-T98) method  
METHOD [3] using SAM version 2.1.1 [1], a refinement of the methods developed  
METHOD by this group for CASP2 [2].  This method attempts to find and multiply   
METHOD align a set of homologs to a given sequence, then create an HMM from that   
METHOD multiple alignment.  
METHOD   
METHOD First, a set of sequence weights is determined from the alignment.  Next,   
METHOD Modelfromalign is used to build the model from the alignment and the   
METHOD sequence weights.  Finally, hmmscore performs a local, all-paths scoring   
METHOD of the sequences, using a reversed-sequence normalization feature.  
METHOD   
METHOD The weighting method, detailed in upcoming publications [3,4],  
METHOD combines the Henikoffs' scheme [5], Dirichlet mixtures [6], and an  
METHOD entropy method to set the final weights.  
METHOD   
METHOD Alignment generation  
METHOD   
METHOD The initial step uses BLASTP to search NRP twice: once to produce a set  
METHOD of very close homologs, and once to produce a set of possible homologs.  
METHOD   
METHOD The method then uses multiple iterations of a selection, training, and   
METHOD alignment procedure.  Each iteration involves an initial alignment, a set   
METHOD of search sequences, a threshold value, and a transition regularizer.   
METHOD   
METHOD The first iteration uses a single sequence (or seed alignment) as the   
METHOD initial alignment and the close homologs found by BLASTP are used as the   
METHOD search set.  The threshold is set very strictly, so that only good matches   
METHOD to the sequence are considered.  This iteration uses a transition regularizer   
METHOD that was designed to match the gap costs used by BLASTP.  
METHOD   
METHOD On subsequent iterations the input alignment is the output from the  
METHOD previous iteration, the search set is the larger set of possible  
METHOD homologs found by BLASTP, and the thresholds are gradually loosened.  
METHOD The second through second-from-last iteration use a ``long-match''  
METHOD transition regularizer, and the final iteration uses a transition regularizer   
METHOD trained on FSSP alignments.  
METHOD   
METHOD References  
METHOD [1] R. Hughey and A. Krogh, CABIOS 12(2): 95-107, 1996.  
METHOD     http://www.cse.ucsc.edu/research/compbio/sam.html.    
METHOD [2] K. Karplus, K. Sjolander, C. Barrett, M. Cline, D. Haussler, R.  
METHOD     Hughey, L. Holm, and C. Sander, Proteins: Structure, Function, and   
METHOD     Genetics, Suppl. 1, 134-9, 1997.  
METHOD [3] K. Karplus, C. Barrett, and R. Hughey, Technical Report UCSC-CRL-98-06,  
METHOD     Department of Computer Engineering, Univ. of California, Santa Cruz, 1998.  
METHOD [4] J. Park, K. Karplus, C. Barrett, R. Hughey, D. Haussler, T. Hubbard,  
METHOD     and C. Chothia, http://cyrah.med.harvard.edu/~jong/assess_final.html, 1998.  
METHOD [5] S. Henikoff and J. C. Henikoff, JMB, vol 243, pp 574-578, Nov 1994.  
METHOD [6] K. Sjolander, K. Karplus, M. P. Brown, R. Hughey, A. Krogh, I. S.  
METHOD    Mian, and D. Haussler, CABIOS 12(4):327-345, 1996.  
METHOD   
METHOD   
METHOD Results  
METHOD   
METHOD The claim with Target 61 was that it does not have a homologous sequence  
METHOD of known structure, and that claim seemed to be verified by comparison  
METHOD against our model library.  For the FSSP library, out top scoring structure  
METHOD was 1ksr at -6.3.  We chose 1amj, though, as a template based mainly on  
METHOD a strong match to a helical region.  Its score placed it fourth in the ranking  
METHOD at -5.5.  Although 1ksr looked plausible, it is an all beta protein.  This  
METHOD conflicted with our secondary structure prediction for t61 as an all-helical  
METHOD protein.  For the scores we received for this target, we expect a new fold   
METHOD with approximately 90% likelihood.   
METHOD   
MODEL 1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1amj 
ATOM      1  N   ALA     1      27.685  26.624  73.445  1.00  0.00              
ATOM      2  CA  ALA     1      26.384  26.078  73.053  1.00  0.00              
ATOM      3  C   ALA     1      26.362  25.086  71.903  1.00  0.00              
ATOM      4  O   ALA     1      25.380  24.358  71.712  1.00  0.00              
ATOM      5  N   ASP     2      27.413  25.073  71.078  1.00  0.00              
ATOM      6  CA  ASP     2      27.604  24.079  70.021  1.00  0.00              
ATOM      7  C   ASP     2      27.283  22.659  70.496  1.00  0.00              
ATOM      8  O   ASP     2      26.674  21.857  69.796  1.00  0.00              
ATOM      9  N   ALA     3      27.655  22.294  71.736  1.00  0.00              
ATOM     10  CA  ALA     3      27.463  20.933  72.241  1.00  0.00              
ATOM     11  C   ALA     3      26.004  20.580  72.487  1.00  0.00              
ATOM     12  O   ALA     3      25.708  19.418  72.792  1.00  0.00              
ATOM     13  N   GLN     4      25.086  21.565  72.350  1.00  0.00              
ATOM     14  CA  GLN     4      23.635  21.345  72.404  1.00  0.00              
ATOM     15  C   GLN     4      23.175  20.442  71.269  1.00  0.00              
ATOM     16  O   GLN     4      22.106  19.806  71.327  1.00  0.00              
ATOM     17  N   LYS     5      23.986  20.327  70.210  1.00  0.00              
ATOM     18  CA  LYS     5      23.675  19.415  69.120  1.00  0.00              
ATOM     19  C   LYS     5      23.759  17.961  69.576  1.00  0.00              
ATOM     20  O   LYS     5      23.268  17.087  68.868  1.00  0.00              
ATOM     21  N   ALA     6      24.369  17.665  70.749  1.00  0.00              
ATOM     22  CA  ALA     6      24.371  16.309  71.297  1.00  0.00              
ATOM     23  C   ALA     6      23.557  16.215  72.608  1.00  0.00              
ATOM     24  O   ALA     6      23.786  15.376  73.486  1.00  0.00              
ATOM     25  N   ALA     7      22.582  17.112  72.766  1.00  0.00              
ATOM     26  CA  ALA     7      21.580  17.012  73.839  1.00  0.00              
ATOM     27  C   ALA     7      22.018  17.434  75.221  1.00  0.00              
ATOM     28  O   ALA     7      21.393  17.099  76.223  1.00  0.00              
ATOM     29  N   ASP     8      23.142  18.135  75.316  1.00  0.00              
ATOM     30  CA  ASP     8      23.645  18.578  76.593  1.00  0.00              
ATOM     31  C   ASP     8      23.430  20.070  76.748  1.00  0.00              
ATOM     32  O   ASP     8      23.090  20.785  75.783  1.00  0.00              
ATOM     33  N   ASN     9      23.571  20.543  77.986  1.00  0.00              
ATOM     34  CA  ASN     9      23.504  21.972  78.236  1.00  0.00              
ATOM     35  C   ASN     9      24.957  22.452  78.391  1.00  0.00              
ATOM     36  O   ASN     9      25.680  22.112  79.319  1.00  0.00              
ATOM     37  N   LYS    10      25.376  23.265  77.436  1.00  0.00              
ATOM     38  CA  LYS    10      26.753  23.703  77.323  1.00  0.00              
ATOM     39  C   LYS    10      26.683  25.221  77.303  1.00  0.00              
ATOM     40  O   LYS    10      26.114  25.826  76.395  1.00  0.00              
ATOM     41  N   LYS    11      27.285  25.841  78.309  1.00  0.00              
ATOM     42  CA  LYS    11      27.154  27.262  78.508  1.00  0.00              
ATOM     43  C   LYS    11      28.484  27.970  78.518  1.00  0.00              
ATOM     44  O   LYS    11      29.429  27.533  79.195  1.00  0.00              
ATOM     45  N   PRO    12      28.535  29.074  77.786  1.00  0.00              
ATOM     46  CA  PRO    12      29.695  29.957  77.757  1.00  0.00              
ATOM     47  C   PRO    12      29.811  30.773  79.023  1.00  0.00              
ATOM     48  O   PRO    12      28.796  31.282  79.517  1.00  0.00              
ATOM     49  N   VAL    13      31.031  30.942  79.576  1.00  0.00              
ATOM     50  CA  VAL    13      31.304  31.678  80.810  1.00  0.00              
ATOM     51  C   VAL    13      32.650  32.377  80.719  1.00  0.00              
ATOM     52  O   VAL    13      33.448  32.095  79.827  1.00  0.00              
ATOM     53  N   ASN    14      32.921  33.326  81.616  1.00  0.00              
ATOM     54  CA  ASN    14      34.238  33.939  81.732  1.00  0.00              
ATOM     55  C   ASN    14      35.180  33.055  82.549  1.00  0.00              
ATOM     56  O   ASN    14      34.737  32.113  83.227  1.00  0.00              
ATOM     57  N   SER    15      36.483  33.344  82.478  1.00  0.00              
ATOM     58  CA  SER    15      37.509  32.544  83.152  1.00  0.00              
ATOM     59  C   SER    15      37.240  32.369  84.631  1.00  0.00              
ATOM     60  O   SER    15      37.377  31.235  85.125  1.00  0.00              
ATOM     61  N   TRP    16      36.782  33.392  85.357  1.00  0.00              
ATOM     62  CA  TRP    16      36.533  33.255  86.774  1.00  0.00              
ATOM     63  C   TRP    16      35.409  32.308  87.101  1.00  0.00              
ATOM     64  O   TRP    16      35.418  31.718  88.187  1.00  0.00              
ATOM     65  N   THR    17      34.455  32.063  86.208  1.00  0.00              
ATOM     66  CA  THR    17      33.399  31.086  86.476  1.00  0.00              
ATOM     67  C   THR    17      33.938  29.674  86.358  1.00  0.00              
ATOM     68  O   THR    17      33.530  28.793  87.116  1.00  0.00              
ATOM     69  N   CYS    18      34.851  29.442  85.395  1.00  0.00              
ATOM     70  CA  CYS    18      35.543  28.174  85.220  1.00  0.00              
ATOM     71  C   CYS    18      36.388  27.914  86.465  1.00  0.00              
ATOM     72  O   CYS    18      36.400  26.772  86.919  1.00  0.00              
ATOM     73  N   GLU    19      37.071  28.908  87.062  1.00  0.00              
ATOM     74  CA  GLU    19      37.795  28.755  88.316  1.00  0.00              
ATOM     75  C   GLU    19      36.883  28.279  89.445  1.00  0.00              
ATOM     76  O   GLU    19      37.314  27.366  90.158  1.00  0.00              
ATOM     77  N   ASP    20      35.651  28.790  89.646  1.00  0.00              
ATOM     78  CA  ASP    20      34.710  28.244  90.633  1.00  0.00              
ATOM     79  C   ASP    20      34.520  26.733  90.543  1.00  0.00              
ATOM     80  O   ASP    20      34.624  25.991  91.526  1.00  0.00              
ATOM     81  N   PHE    21      34.245  26.248  89.342  1.00  0.00              
ATOM     82  CA  PHE    21      33.961  24.852  89.164  1.00  0.00              
ATOM     83  C   PHE    21      35.231  24.036  89.270  1.00  0.00              
ATOM     84  O   PHE    21      35.225  22.966  89.874  1.00  0.00              
ATOM     85  N   LEU    22      36.370  24.503  88.770  1.00  0.00              
ATOM     86  CA  LEU    22      37.608  23.776  88.938  1.00  0.00              
ATOM     87  C   LEU    22      38.019  23.702  90.406  1.00  0.00              
ATOM     88  O   LEU    22      38.720  22.785  90.817  1.00  0.00              
ATOM     89  N   ALA    23      37.608  24.689  91.181  1.00  0.00              
ATOM     90  CA  ALA    23      37.869  24.789  92.590  1.00  0.00              
ATOM     91  C   ALA    23      36.858  23.994  93.398  1.00  0.00              
ATOM     92  O   ALA    23      37.093  23.817  94.590  1.00  0.00              
ATOM     93  N   VAL    24      35.710  23.557  92.874  1.00  0.00              
ATOM     94  CA  VAL    24      34.774  22.729  93.625  1.00  0.00              
ATOM     95  C   VAL    24      33.644  23.509  94.295  1.00  0.00              
ATOM     96  O   VAL    24      32.776  22.947  94.963  1.00  0.00              
ATOM     97  N   ASP    25      33.532  24.808  94.092  1.00  0.00              
ATOM     98  CA  ASP    25      32.449  25.497  94.723  1.00  0.00              
ATOM     99  C   ASP    25      31.257  25.490  93.740  1.00  0.00              
ATOM    100  O   ASP    25      31.468  25.271  92.535  1.00  0.00              
ATOM    101  N   GLU    26      29.986  25.599  94.192  1.00  0.00              
ATOM    102  CA  GLU    26      28.788  25.681  93.316  1.00  0.00              
ATOM    103  C   GLU    26      28.850  26.764  92.223  1.00  0.00              
ATOM    104  O   GLU    26      29.400  27.844  92.448  1.00  0.00              
ATOM    105  N   SER    27      28.339  26.553  91.026  1.00  0.00              
ATOM    106  CA  SER    27      28.376  27.586  90.007  1.00  0.00              
ATOM    107  C   SER    27      27.003  28.242  89.959  1.00  0.00              
ATOM    108  O   SER    27      25.994  27.526  89.980  1.00  0.00              
ATOM    109  N   PHE    28      26.887  29.571  89.918  1.00  0.00              
ATOM    110  CA  PHE    28      25.585  30.206  89.886  1.00  0.00              
ATOM    111  C   PHE    28      25.143  30.664  88.514  1.00  0.00              
ATOM    112  O   PHE    28      25.924  31.259  87.767  1.00  0.00              
ATOM    113  N   GLN    29      23.880  30.443  88.170  1.00  0.00              
ATOM    114  CA  GLN    29      23.343  30.859  86.885  1.00  0.00              
ATOM    115  C   GLN    29      21.929  31.341  87.125  1.00  0.00              
ATOM    116  O   GLN    29      21.159  30.669  87.800  1.00  0.00              
ATOM    117  N   PRO    30      21.572  32.516  86.637  1.00  0.00              
ATOM    118  CA  PRO    30      20.213  32.999  86.745  1.00  0.00              
ATOM    119  C   PRO    30      19.313  31.975  86.055  1.00  0.00              
ATOM    120  O   PRO    30      19.570  31.581  84.919  1.00  0.00              
ATOM    121  N   THR    31      18.211  31.559  86.657  1.00  0.00              
ATOM    122  CA  THR    31      17.300  30.586  86.094  1.00  0.00              
ATOM    123  C   THR    31      16.795  31.057  84.740  1.00  0.00              
ATOM    124  O   THR    31      16.261  32.181  84.622  1.00  0.00              
ATOM    125  N   ALA    32      16.983  30.310  83.638  1.00  0.00              
ATOM    126  CA  ALA    32      16.575  30.826  82.353  1.00  0.00              
ATOM    127  C   ALA    32      15.086  30.705  82.018  1.00  0.00              
ATOM    128  O   ALA    32      14.358  29.853  82.536  1.00  0.00              
ATOM    129  N   VAL    33      14.665  31.620  81.157  1.00  0.00              
ATOM    130  CA  VAL    33      13.404  31.511  80.458  1.00  0.00              
ATOM    131  C   VAL    33      13.630  30.478  79.362  1.00  0.00              
ATOM    132  O   VAL    33      14.782  30.133  79.061  1.00  0.00              
ATOM    133  N   GLY    34      12.634  29.934  78.706  1.00  0.00              
ATOM    134  CA  GLY    34      12.841  28.924  77.678  1.00  0.00              
ATOM    135  C   GLY    34      12.038  29.322  76.452  1.00  0.00              
ATOM    136  O   GLY    34      10.808  29.433  76.507  1.00  0.00              
ATOM    137  N   PHE    35      12.698  29.578  75.341  1.00  0.00              
ATOM    138  CA  PHE    35      12.031  29.892  74.084  1.00  0.00              
ATOM    139  C   PHE    35      11.908  28.565  73.346  1.00  0.00              
ATOM    140  O   PHE    35      12.936  27.919  73.118  1.00  0.00              
ATOM    141  N   ALA    36      10.753  28.088  72.913  1.00  0.00              
ATOM    142  CA  ALA    36      10.652  26.848  72.155  1.00  0.00              
ATOM    143  C   ALA    36      10.672  27.146  70.664  1.00  0.00              
ATOM    144  O   ALA    36      10.079  28.141  70.251  1.00  0.00              
ATOM    145  N   GLU    37      11.324  26.344  69.822  1.00  0.00              
ATOM    146  CA  GLU    37      11.253  26.563  68.375  1.00  0.00              
ATOM    147  C   GLU    37      10.771  25.225  67.864  1.00  0.00              
ATOM    148  O   GLU    37      11.485  24.229  68.022  1.00  0.00              
ATOM    149  N   ALA    38       9.530  25.113  67.405  1.00  0.00              
ATOM    150  CA  ALA    38       9.024  23.854  66.890  1.00  0.00              
ATOM    151  C   ALA    38       9.359  23.765  65.404  1.00  0.00              
ATOM    152  O   ALA    38       9.077  24.681  64.634  1.00  0.00              
ATOM    153  N   LEU    39      10.006  22.674  64.993  1.00  0.00              
ATOM    154  CA  LEU    39      10.415  22.500  63.628  1.00  0.00              
ATOM    155  C   LEU    39       9.462  21.493  63.061  1.00  0.00              
ATOM    156  O   LEU    39       9.132  20.471  63.659  1.00  0.00              
ATOM    157  N   ASN    40       9.064  21.757  61.846  1.00  0.00              
ATOM    158  CA  ASN    40       8.103  20.934  61.143  1.00  0.00              
ATOM    159  C   ASN    40       8.681  20.662  59.747  1.00  0.00              
ATOM    160  O   ASN    40       9.545  21.406  59.288  1.00  0.00              
ATOM    161  N   ASN    41       8.259  19.621  59.037  1.00  0.00              
ATOM    162  CA  ASN    41       8.690  19.302  57.661  1.00  0.00              
ATOM    163  C   ASN    41      10.122  18.791  57.589  1.00  0.00              
ATOM    164  O   ASN    41      10.589  18.207  58.569  1.00  0.00              
ATOM    165  N   LYS    42      10.803  18.979  56.465  1.00  0.00              
ATOM    166  CA  LYS    42      12.173  18.551  56.351  1.00  0.00              
ATOM    167  C   LYS    42      12.907  19.405  55.369  1.00  0.00              
ATOM    168  O   LYS    42      12.340  20.146  54.574  1.00  0.00              
ATOM    169  N   ASP    43      14.219  19.439  55.549  1.00  0.00              
ATOM    170  CA  ASP    43      15.052  20.224  54.658  1.00  0.00              
ATOM    171  C   ASP    43      15.153  19.438  53.360  1.00  0.00              
ATOM    172  O   ASP    43      14.986  18.205  53.342  1.00  0.00              
ATOM    173  N   LYS    44      20.123  24.118  54.239  1.00  0.00              
ATOM    174  CA  LYS    44      20.935  23.296  55.131  1.00  0.00              
ATOM    175  C   LYS    44      20.550  23.604  56.581  1.00  0.00              
ATOM    176  O   LYS    44      19.754  24.534  56.791  1.00  0.00              
ATOM    177  N   PRO    45      21.055  22.921  57.635  1.00  0.00              
ATOM    178  CA  PRO    45      20.851  23.326  59.026  1.00  0.00              
ATOM    179  C   PRO    45      21.208  24.774  59.318  1.00  0.00              
ATOM    180  O   PRO    45      20.487  25.401  60.074  1.00  0.00              
ATOM    181  N   GLU    46      22.279  25.361  58.776  1.00  0.00              
ATOM    182  CA  GLU    46      22.616  26.755  58.984  1.00  0.00              
ATOM    183  C   GLU    46      21.438  27.719  58.689  1.00  0.00              
ATOM    184  O   GLU    46      21.238  28.691  59.444  1.00  0.00              
ATOM    185  N   ASP    47      20.614  27.479  57.634  1.00  0.00              
ATOM    186  CA  ASP    47      19.464  28.322  57.319  1.00  0.00              
ATOM    187  C   ASP    47      18.469  28.392  58.449  1.00  0.00              
ATOM    188  O   ASP    47      17.878  29.445  58.636  1.00  0.00              
ATOM    189  N   ALA    48      18.297  27.379  59.293  1.00  0.00              
ATOM    190  CA  ALA    48      17.383  27.434  60.447  1.00  0.00              
ATOM    191  C   ALA    48      17.804  28.515  61.427  1.00  0.00              
ATOM    192  O   ALA    48      16.998  29.349  61.817  1.00  0.00              
ATOM    193  N   VAL    49      19.062  28.591  61.833  1.00  0.00              
ATOM    194  CA  VAL    49      19.448  29.617  62.778  1.00  0.00              
ATOM    195  C   VAL    49      19.645  30.945  62.029  1.00  0.00              
ATOM    196  O   VAL    49      19.507  31.995  62.658  1.00  0.00              
ATOM    197  N   LEU    50      19.932  31.032  60.723  1.00  0.00              
ATOM    198  CA  LEU    50      19.979  32.332  60.033  1.00  0.00              
ATOM    199  C   LEU    50      18.572  32.966  60.040  1.00  0.00              
ATOM    200  O   LEU    50      18.391  34.173  60.262  1.00  0.00              
ATOM    201  N   ASP    51      17.533  32.159  59.829  1.00  0.00              
ATOM    202  CA  ASP    51      16.144  32.567  59.927  1.00  0.00              
ATOM    203  C   ASP    51      15.769  32.967  61.350  1.00  0.00              
ATOM    204  O   ASP    51      15.172  34.021  61.519  1.00  0.00              
ATOM    205  N   VAL    52      16.048  32.143  62.379  1.00  0.00              
ATOM    206  CA  VAL    52      15.769  32.398  63.793  1.00  0.00              
ATOM    207  C   VAL    52      16.489  33.662  64.218  1.00  0.00              
ATOM    208  O   VAL    52      15.886  34.466  64.907  1.00  0.00              
ATOM    209  N   GLN    53      17.735  33.944  63.866  1.00  0.00              
ATOM    210  CA  GLN    53      18.427  35.187  64.206  1.00  0.00              
ATOM    211  C   GLN    53      17.713  36.387  63.600  1.00  0.00              
ATOM    212  O   GLN    53      17.552  37.402  64.273  1.00  0.00              
ATOM    213  N   GLY    54      17.249  36.286  62.349  1.00  0.00              
ATOM    214  CA  GLY    54      16.477  37.332  61.725  1.00  0.00              
ATOM    215  C   GLY    54      15.205  37.564  62.517  1.00  0.00              
ATOM    216  O   GLY    54      14.883  38.707  62.783  1.00  0.00              
ATOM    217  N   ILE    55      14.487  36.541  62.967  1.00  0.00              
ATOM    218  CA  ILE    55      13.285  36.697  63.764  1.00  0.00              
ATOM    219  C   ILE    55      13.512  37.243  65.180  1.00  0.00              
ATOM    220  O   ILE    55      12.840  38.188  65.593  1.00  0.00              
ATOM    221  N   ALA    56      14.430  36.697  65.971  1.00  0.00              
ATOM    222  CA  ALA    56      14.620  37.118  67.325  1.00  0.00              
ATOM    223  C   ALA    56      15.446  38.353  67.511  1.00  0.00              
ATOM    224  O   ALA    56      15.268  39.070  68.497  1.00  0.00              
ATOM    225  N   THR    57      16.313  38.622  66.547  1.00  0.00              
ATOM    226  CA  THR    57      17.312  39.687  66.475  1.00  0.00              
ATOM    227  C   THR    57      18.456  39.416  67.454  1.00  0.00              
ATOM    228  O   THR    57      18.274  38.565  68.331  1.00  0.00              
ATOM    229  N   VAL    58      19.596  40.106  67.448  1.00  0.00              
ATOM    230  CA  VAL    58      20.675  39.810  68.374  1.00  0.00              
ATOM    231  C   VAL    58      20.311  40.026  69.846  1.00  0.00              
ATOM    232  O   VAL    58      21.004  39.555  70.756  1.00  0.00              
ATOM    233  N   THR    59      18.303  36.970  75.074  1.00  0.00              
ATOM    234  CA  THR    59      18.893  37.228  76.374  1.00  0.00              
ATOM    235  C   THR    59      18.116  36.579  77.508  1.00  0.00              
ATOM    236  O   THR    59      16.884  36.648  77.545  1.00  0.00              
ATOM    237  N   PRO    60      18.838  35.849  78.373  1.00  0.00              
ATOM    238  CA  PRO    60      18.284  35.195  79.572  1.00  0.00              
ATOM    239  C   PRO    60      17.441  33.961  79.287  1.00  0.00              
ATOM    240  O   PRO    60      16.792  33.408  80.180  1.00  0.00              
ATOM    241  N   ALA    61      17.440  33.466  78.055  1.00  0.00              
ATOM    242  CA  ALA    61      16.682  32.277  77.759  1.00  0.00              
ATOM    243  C   ALA    61      17.505  31.175  77.112  1.00  0.00              
ATOM    244  O   ALA    61      18.539  31.430  76.478  1.00  0.00              
ATOM    245  N   ILE    62      17.069  29.922  77.274  1.00  0.00              
ATOM    246  CA  ILE    62      17.627  28.803  76.527  1.00  0.00              
ATOM    247  C   ILE    62      16.705  28.571  75.340  1.00  0.00              
ATOM    248  O   ILE    62      15.485  28.642  75.528  1.00  0.00              
ATOM    249  N   VAL    63      17.230  28.326  74.125  1.00  0.00              
ATOM    250  CA  VAL    63      16.388  28.040  72.977  1.00  0.00              
ATOM    251  C   VAL    63      16.345  26.517  72.889  1.00  0.00              
ATOM    252  O   VAL    63      17.390  25.873  72.761  1.00  0.00              
ATOM    253  N   GLN    64      15.136  25.966  72.933  1.00  0.00              
ATOM    254  CA  GLN    64      14.881  24.552  72.928  1.00  0.00              
ATOM    255  C   GLN    64      14.164  24.131  71.658  1.00  0.00              
ATOM    256  O   GLN    64      12.959  24.423  71.455  1.00  0.00              
ATOM    257  N   ALA    65      20.856  16.270  60.691  1.00  0.00              
ATOM    258  CA  ALA    65      21.958  15.451  61.212  1.00  0.00              
ATOM    259  C   ALA    65      22.352  15.951  62.613  1.00  0.00              
ATOM    260  O   ALA    65      22.129  17.134  62.928  1.00  0.00              
ATOM    261  N   CYS    66      22.984  15.138  63.458  1.00  0.00              
ATOM    262  CA  CYS    66      23.456  15.615  64.733  1.00  0.00              
ATOM    263  C   CYS    66      24.462  16.770  64.560  1.00  0.00              
ATOM    264  O   CYS    66      24.429  17.732  65.324  1.00  0.00              
ATOM    265  N   THR    67      25.358  16.800  63.557  1.00  0.00              
ATOM    266  CA  THR    67      26.255  17.929  63.386  1.00  0.00              
ATOM    267  C   THR    67      25.477  19.144  62.901  1.00  0.00              
ATOM    268  O   THR    67      25.854  20.271  63.222  1.00  0.00              
ATOM    269  N   GLN    68      24.394  18.978  62.142  1.00  0.00              
ATOM    270  CA  GLN    68      23.590  20.115  61.752  1.00  0.00              
ATOM    271  C   GLN    68      22.944  20.721  62.982  1.00  0.00              
ATOM    272  O   GLN    68      22.832  21.937  63.071  1.00  0.00              
ATOM    273  N   ASP    69      22.512  19.916  63.940  1.00  0.00              
ATOM    274  CA  ASP    69      21.946  20.392  65.192  1.00  0.00              
ATOM    275  C   ASP    69      22.971  21.194  65.955  1.00  0.00              
ATOM    276  O   ASP    69      22.647  22.235  66.535  1.00  0.00              
ATOM    277  N   LYS    70      24.242  20.800  65.908  1.00  0.00              
ATOM    278  CA  LYS    70      25.265  21.568  66.609  1.00  0.00              
ATOM    279  C   LYS    70      25.502  22.923  65.923  1.00  0.00              
ATOM    280  O   LYS    70      25.707  23.939  66.608  1.00  0.00              
ATOM    281  N   GLN    71      25.447  23.010  64.585  1.00  0.00              
ATOM    282  CA  GLN    71      25.519  24.280  63.851  1.00  0.00              
ATOM    283  C   GLN    71      24.459  25.255  64.335  1.00  0.00              
ATOM    284  O   GLN    71      24.744  26.424  64.579  1.00  0.00              
ATOM    285  N   ALA    72      23.225  24.783  64.457  1.00  0.00              
ATOM    286  CA  ALA    72      22.120  25.620  64.913  1.00  0.00              
ATOM    287  C   ALA    72      22.326  26.081  66.356  1.00  0.00              
ATOM    288  O   ALA    72      22.233  27.285  66.612  1.00  0.00              
ATOM    289  N   ASN    73      22.709  25.206  67.297  1.00  0.00              
ATOM    290  CA  ASN    73      22.925  25.600  68.674  1.00  0.00              
ATOM    291  C   ASN    73      24.094  26.552  68.792  1.00  0.00              
ATOM    292  O   ASN    73      24.054  27.490  69.580  1.00  0.00              
ATOM    293  N   PHE    74      25.143  26.362  68.002  1.00  0.00              
ATOM    294  CA  PHE    74      26.312  27.224  67.998  1.00  0.00              
ATOM    295  C   PHE    74      25.961  28.698  67.779  1.00  0.00              
ATOM    296  O   PHE    74      26.241  29.569  68.628  1.00  0.00              
ATOM    297  N   LYS    75      25.292  28.980  66.650  1.00  0.00              
ATOM    298  CA  LYS    75      25.007  30.362  66.297  1.00  0.00              
ATOM    299  C   LYS    75      23.891  31.004  67.148  1.00  0.00              
ATOM    300  O   LYS    75      23.651  32.218  67.112  1.00  0.00              
ATOM    301  N   ASP    76      23.228  30.261  68.037  1.00  0.00              
ATOM    302  CA  ASP    76      22.295  30.854  69.023  1.00  0.00              
ATOM    303  C   ASP    76      23.029  31.818  69.927  1.00  0.00              
ATOM    304  O   ASP    76      22.400  32.663  70.580  1.00  0.00              
ATOM    305  N   LYS    77      24.368  31.760  69.962  1.00  0.00              
ATOM    306  CA  LYS    77      25.164  32.735  70.709  1.00  0.00              
ATOM    307  C   LYS    77      24.980  34.142  70.146  1.00  0.00              
ATOM    308  O   LYS    77      25.051  35.131  70.873  1.00  0.00              
ATOM    309  N   VAL    78      24.652  34.299  68.872  1.00  0.00              
ATOM    310  CA  VAL    78      24.495  35.609  68.287  1.00  0.00              
ATOM    311  C   VAL    78      23.145  36.286  68.558  1.00  0.00              
ATOM    312  O   VAL    78      22.884  37.401  68.108  1.00  0.00              
ATOM    313  N   LYS    79      22.205  35.628  69.231  1.00  0.00              
ATOM    314  CA  LYS    79      20.978  36.287  69.631  1.00  0.00              
ATOM    315  C   LYS    79      20.988  36.426  71.148  1.00  0.00              
ATOM    316  O   LYS    79      19.940  36.681  71.728  1.00  0.00              
ATOM    317  N   GLY    80      22.117  36.192  71.844  1.00  0.00              
ATOM    318  CA  GLY    80      22.268  36.400  73.278  1.00  0.00              
ATOM    319  C   GLY    80      21.694  35.311  74.162  1.00  0.00              
ATOM    320  O   GLY    80      21.611  35.534  75.383  1.00  0.00              
ATOM    321  N   GLU    81      21.297  34.169  73.591  1.00  0.00              
ATOM    322  CA  GLU    81      20.692  33.079  74.340  1.00  0.00              
ATOM    323  C   GLU    81      21.647  32.541  75.407  1.00  0.00              
ATOM    324  O   GLU    81      22.874  32.646  75.242  1.00  0.00              
ATOM    325  N   TRP    82      21.200  32.038  76.573  1.00  0.00              
ATOM    326  CA  TRP    82      22.122  31.392  77.514  1.00  0.00              
ATOM    327  C   TRP    82      22.769  30.128  76.895  1.00  0.00              
ATOM    328  O   TRP    82      23.950  29.864  77.112  1.00  0.00              
ATOM    329  N   ASP    83      21.999  29.332  76.145  1.00  0.00              
ATOM    330  CA  ASP    83      22.496  28.227  75.315  1.00  0.00              
ATOM    331  C   ASP    83      21.307  27.722  74.490  1.00  0.00              
ATOM    332  O   ASP    83      20.211  28.302  74.561  1.00  0.00              
ATOM    333  N   LYS    84      21.464  26.692  73.657  1.00  0.00              
ATOM    334  CA  LYS    84      20.386  26.102  72.891  1.00  0.00              
ATOM    335  C   LYS    84      20.497  24.594  73.038  1.00  0.00              
ATOM    336  O   LYS    84      21.576  24.132  73.417  1.00  0.00              
ATOM    337  N   ILE    85      19.463  23.805  72.788  1.00  0.00              
ATOM    338  CA  ILE    85      19.541  22.378  72.988  1.00  0.00              
ATOM    339  C   ILE    85      18.499  21.692  72.087  1.00  0.00              
ATOM    340  O   ILE    85      17.500  22.307  71.721  1.00  0.00              
ATOM    341  N   LYS    86      18.819  20.464  71.639  1.00  0.00              
ATOM    342  CA  LYS    86      17.955  19.576  70.859  1.00  0.00              
ATOM    343  C   LYS    86      17.703  18.357  71.738  1.00  0.00              
ATOM    344  O   LYS    86      18.611  18.047  72.524  1.00  0.00              
ATOM    345  N   LYS    87      16.552  17.629  71.666  1.00  0.00              
ATOM    346  CA  LYS    87      16.298  16.364  72.378  1.00  0.00              
ATOM    347  C   LYS    87      17.059  15.171  71.804  1.00  0.00              
ATOM    348  O   LYS    87      17.330  15.070  70.599  1.00  0.00              
ATOM    349  N   ASP    88      17.369  14.217  72.674  1.00  0.00              
ATOM    350  CA  ASP    88      18.059  13.033  72.250  1.00  0.00              
ATOM    351  C   ASP    88      17.134  12.274  71.292  1.00  0.00              
ATOM    352  O   ASP    88      15.941  12.056  71.550  1.00  0.00              
ATOM    353  N   MET    89      17.671  11.822  70.170  1.00  0.00              
ATOM    354  CA  MET    89      16.952  11.100  69.141  1.00  0.00              
ATOM    355  C   MET    89      17.965  10.220  68.425  1.00  0.00              
ATOM    356  O   MET    89      19.178  10.255  68.693  1.00  0.00              
END
