PFRMAT TS 
TARGET T0059 
AUTHOR 1678-4594-6516 
METHOD Unpublished method by Shindyalov and Bourne based on concept 
METHOD described in the following paper. 
METHOD Shindyalov I.N., Bourne P.E. Protein engng, 1998, in press. 
METHOD (http://cl.sdsc.edu/ce.pdf) 
MODEL  1 
PARENT 1rod_A 
ATOM      1  N   GLU    12      -2.105  29.669 -14.182  1.00  4.00 
ATOM      2  CA  GLU    12      -1.715  30.626 -13.108  1.00  4.00 
ATOM      3  C   GLU    12      -2.383  30.220 -11.792  1.00  4.00 
ATOM      4  O   GLU    12      -3.067  31.005 -11.166  1.00  4.00 
ATOM      5  N   ALA    13      -2.191  29.002 -11.366  1.00  4.00 
ATOM      6  CA  ALA    13      -2.817  28.554 -10.091  1.00  4.00 
ATOM      7  C   ALA    13      -1.745  28.451  -9.004  1.00  4.00 
ATOM      8  O   ALA    13      -0.562  28.439  -9.284  1.00  4.00 
ATOM      9  N   GLU    14      -2.149  28.375  -7.767  1.00  4.00 
ATOM     10  CA  GLU    14      -1.168  28.272  -6.664  1.00  4.00 
ATOM     11  C   GLU    14      -0.077  27.267  -7.038  1.00  4.00 
ATOM     12  O   GLU    14      -0.350  26.214  -7.579  1.00  4.00 
ATOM     13  N   GLY    15       1.158  27.582  -6.754  1.00  4.00 
ATOM     14  CA  GLY    15       2.258  26.651  -7.089  1.00  4.00 
ATOM     15  C   GLY    15       1.858  25.223  -6.712  1.00  4.00 
ATOM     16  O   GLY    15       1.415  24.964  -5.611  1.00  4.00 
ATOM     17  N   HIS    16       2.009  24.292  -7.615  1.00  4.00 
ATOM     18  CA  HIS    16       1.642  22.896  -7.321  1.00  4.00 
ATOM     19  C   HIS    16       2.129  22.490  -5.929  1.00  4.00 
ATOM     20  O   HIS    16       3.092  23.026  -5.417  1.00  4.00 
ATOM     21  N   ILE    17       1.471  21.547  -5.313  1.00  4.00 
ATOM     22  CA  ILE    17       1.884  21.103  -3.963  1.00  4.00 
ATOM     23  C   ILE    17       3.051  20.118  -4.076  1.00  4.00 
ATOM     24  O   ILE    17       3.662  19.981  -5.117  1.00  4.00 
ATOM     25  N   VAL    18       3.364  19.431  -3.011  1.00  4.00 
ATOM     26  CA  VAL    18       4.491  18.456  -3.056  1.00  4.00 
ATOM     27  C   VAL    18       4.244  17.435  -4.169  1.00  4.00 
ATOM     28  O   VAL    18       4.636  17.631  -5.302  1.00  4.00 
ATOM     29  N   THR    19       3.600  16.345  -3.855  1.00  4.00 
ATOM     30  CA  THR    19       3.332  15.313  -4.895  1.00  4.00 
ATOM     31  C   THR    19       1.915  15.490  -5.443  1.00  4.00 
ATOM     32  O   THR    19       1.718  16.012  -6.523  1.00  4.00 
ATOM     33  N   CYS    20       0.925  15.059  -4.709  1.00  4.00 
ATOM     34  CA  CYS    20      -0.478  15.204  -5.192  1.00  4.00 
ATOM     35  C   CYS    20      -1.436  15.200  -3.996  1.00  4.00 
ATOM     36  O   CYS    20      -1.063  14.854  -2.892  1.00  4.00 
ATOM     37  N   GLU    21      -2.669  15.571  -4.209  1.00  4.00 
ATOM     38  CA  GLU    21      -3.649  15.575  -3.086  1.00  4.00 
ATOM     39  C   GLU    21      -4.833  14.677  -3.447  1.00  4.00 
ATOM     40  O   GLU    21      -5.691  14.403  -2.631  1.00  4.00 
ATOM     41  N   THR    22      -4.889  14.225  -4.668  1.00  4.00 
ATOM     42  CA  THR    22      -6.008  13.356  -5.101  1.00  4.00 
ATOM     43  C   THR    22      -5.482  11.948  -5.400  1.00  4.00 
ATOM     44  O   THR    22      -4.371  11.601  -5.050  1.00  4.00 
ATOM     45  N   ASN    23      -6.271  11.140  -6.054  1.00  4.00 
ATOM     46  CA  ASN    23      -5.826   9.757  -6.392  1.00  4.00 
ATOM     47  C   ASN    23      -4.602   9.797  -7.272  1.00  4.00 
ATOM     48  O   ASN    23      -4.020  10.833  -7.530  1.00  4.00 
ATOM     49  N   THR    24      -4.231   8.660  -7.751  1.00  4.00 
ATOM     50  CA  THR    24      -3.070   8.564  -8.645  1.00  4.00 
ATOM     51  C   THR    24      -3.175   9.677  -9.682  1.00  4.00 
ATOM     52  O   THR    24      -2.206  10.298 -10.070  1.00  4.00 
ATOM     53  N   GLY    25      -4.362   9.907 -10.125  1.00  4.00 
ATOM     54  CA  GLY    25      -4.626  10.952 -11.144  1.00  4.00 
ATOM     55  C   GLY    25      -6.133  11.026 -11.323  1.00  4.00 
ATOM     56  O   GLY    25      -6.717  12.069 -11.539  1.00  4.00 
ATOM     57  N   GLU    26      -6.745   9.879 -11.253  1.00  4.00 
ATOM     58  CA  GLU    26      -8.204   9.754 -11.431  1.00  4.00 
ATOM     59  C   GLU    26      -8.760   8.784 -10.387  1.00  4.00 
ATOM     60  O   GLU    26      -8.038   7.971  -9.857  1.00  4.00 
ATOM     61  N   VAL    27     -10.034   8.860 -10.148  1.00  4.00 
ATOM     62  CA  VAL    27     -10.706   7.970  -9.242  1.00  4.00 
ATOM     63  C   VAL    27     -11.180   6.749  -9.954  1.00  4.00 
ATOM     64  O   VAL    27     -11.419   6.729 -11.146  1.00  4.00 
ATOM     65  N   TYR    28     -11.237   5.712  -9.221  1.00  4.00 
ATOM     66  CA  TYR    28     -11.605   4.424  -9.806  1.00  4.00 
ATOM     67  C   TYR    28     -11.781   3.412  -8.686  1.00  4.00 
ATOM     68  O   TYR    28     -11.569   3.725  -7.534  1.00  4.00 
ATOM     69  N   ARG    29     -12.120   2.195  -8.998  1.00  4.00 
ATOM     70  CA  ARG    29     -12.243   1.201  -7.943  1.00  4.00 
ATOM     71  C   ARG    29     -10.825   0.790  -7.578  1.00  4.00 
ATOM     72  O   ARG    29     -10.128   0.216  -8.391  1.00  4.00 
ATOM     73  N   GLY    30     -10.412   1.126  -6.391  1.00  4.00 
ATOM     74  CA  GLY    30      -9.057   0.829  -5.953  1.00  4.00 
ATOM     75  C   GLY    30      -8.903  -0.683  -5.759  1.00  4.00 
ATOM     76  O   GLY    30      -7.825  -1.196  -5.535  1.00  4.00 
ATOM     77  N   LYS    31      -9.996  -1.392  -5.847  1.00  4.00 
ATOM     78  CA  LYS    31      -9.975  -2.865  -5.681  1.00  4.00 
ATOM     79  C   LYS    31      -9.121  -3.509  -6.770  1.00  4.00 
ATOM     80  O   LYS    31      -8.349  -4.413  -6.518  1.00  4.00 
ATOM     81  N   LEU    32      -9.266  -3.055  -7.983  1.00  4.00 
ATOM     82  CA  LEU    32      -8.486  -3.633  -9.102  1.00  4.00 
ATOM     83  C   LEU    32      -7.062  -3.060  -9.128  1.00  4.00 
ATOM     84  O   LEU    32      -6.402  -3.100 -10.138  1.00  4.00 
ATOM     85  N   ILE    33      -6.575  -2.548  -8.037  1.00  4.00 
ATOM     86  CA  ILE    33      -5.203  -2.001  -8.033  1.00  4.00 
ATOM     87  C   ILE    33      -4.192  -3.145  -7.947  1.00  4.00 
ATOM     88  O   ILE    33      -4.259  -3.983  -7.070  1.00  4.00 
ATOM     89  N   GLU    34      -3.249  -3.181  -8.851  1.00  4.00 
ATOM     90  CA  GLU    34      -2.228  -4.264  -8.819  1.00  4.00 
ATOM     91  C   GLU    34      -1.190  -3.935  -7.754  1.00  4.00 
ATOM     92  O   GLU    34      -0.708  -4.805  -7.058  1.00  4.00 
ATOM     93  N   ALA    35      -0.844  -2.687  -7.605  1.00  4.00 
ATOM     94  CA  ALA    35       0.160  -2.335  -6.556  1.00  4.00 
ATOM     95  C   ALA    35      -0.383  -1.183  -5.709  1.00  4.00 
ATOM     96  O   ALA    35      -0.549  -0.090  -6.183  1.00  4.00 
ATOM     97  N   GLU    36       4.062   6.682   3.114  1.00  4.00 
ATOM     98  CA  GLU    36       3.884   6.926   4.573  1.00  4.00 
ATOM     99  C   GLU    36       5.220   7.301   5.224  1.00  4.00 
ATOM    100  O   GLU    36       5.667   6.649   6.147  1.00  4.00 
ATOM    101  N   ASP    37       5.862   8.346   4.768  1.00  4.00 
ATOM    102  CA  ASP    37       7.159   8.737   5.391  1.00  4.00 
ATOM    103  C   ASP    37       6.877   9.507   6.683  1.00  4.00 
ATOM    104  O   ASP    37       5.743   9.634   7.101  1.00  4.00 
ATOM    105  N   ASN    38       7.891  10.029   7.317  1.00  4.00 
ATOM    106  CA  ASN    38       7.661  10.797   8.574  1.00  4.00 
ATOM    107  C   ASN    38       6.763  11.999   8.265  1.00  4.00 
ATOM    108  O   ASN    38       5.927  11.934   7.390  1.00  4.00 
ATOM    109  N   MET    39       6.935  13.054   9.009  1.00  4.00 
ATOM    110  CA  MET    39       6.188  14.251   8.840  1.00  4.00 
ATOM    111  C   MET    39       7.003  15.318   8.107  1.00  4.00 
ATOM    112  O   MET    39       7.972  15.841   8.620  1.00  4.00 
ATOM    113  N   ASN    40       6.619  15.631   6.919  1.00  4.00 
ATOM    114  CA  ASN    40       7.371  16.664   6.129  1.00  4.00 
ATOM    115  C   ASN    40       6.499  17.169   4.978  1.00  4.00 
ATOM    116  O   ASN    40       5.799  18.154   5.098  1.00  4.00 
ATOM    117  N   CYS    41       6.542  16.496   3.862  1.00  4.00 
ATOM    118  CA  CYS    41       5.722  16.927   2.694  1.00  4.00 
ATOM    119  C   CYS    41       5.971  15.981   1.513  1.00  4.00 
ATOM    120  O   CYS    41       5.118  15.792   0.669  1.00  4.00 
ATOM    121  N   GLN    42       7.131  15.383   1.448  1.00  4.00 
ATOM    122  CA  GLN    42       7.434  14.451   0.328  1.00  4.00 
ATOM    123  C   GLN    42       6.425  13.308   0.310  1.00  4.00 
ATOM    124  O   GLN    42       5.441  13.337  -0.401  1.00  4.00 
ATOM    125  N   MET    43       6.680  12.297   1.080  1.00  4.00 
ATOM    126  CA  MET    43       5.776  11.132   1.123  1.00  4.00 
ATOM    127  C   MET    43       5.031  11.090   2.447  1.00  4.00 
ATOM    128  O   MET    43       5.614  11.171   3.510  1.00  4.00 
ATOM    129  N   SER    44       3.748  10.962   2.389  1.00  4.00 
ATOM    130  CA  SER    44       2.961  10.928   3.647  1.00  4.00 
ATOM    131  C   SER    44       1.488  10.623   3.356  1.00  4.00 
ATOM    132  O   SER    44       0.637  10.729   4.217  1.00  4.00 
ATOM    133  N   ASN    45       1.182  10.269   2.147  1.00  4.00 
ATOM    134  CA  ASN    45      -0.247   9.983   1.788  1.00  4.00 
ATOM    135  C   ASN    45      -0.407   8.559   1.234  1.00  4.00 
ATOM    136  O   ASN    45       0.443   7.704   1.411  1.00  4.00 
ATOM    137  N   ILE    46      -1.505   8.295   0.561  1.00  4.00 
ATOM    138  CA  ILE    46      -1.727   6.933   0.001  1.00  4.00 
ATOM    139  C   ILE    46      -1.245   6.898  -1.447  1.00  4.00 
ATOM    140  O   ILE    46      -0.983   7.921  -2.043  1.00  4.00 
ATOM    141  N   THR    47      -1.132   5.729  -2.016  1.00  4.00 
ATOM    142  CA  THR    47      -0.665   5.625  -3.429  1.00  4.00 
ATOM    143  C   THR    47      -1.114   4.269  -4.016  1.00  4.00 
ATOM    144  O   THR    47      -1.625   3.420  -3.316  1.00  4.00 
ATOM    145  N   VAL    48      -0.973   4.066  -5.293  1.00  4.00 
ATOM    146  CA  VAL    48      -1.462   2.809  -5.897  1.00  4.00 
ATOM    147  C   VAL    48      -0.897   2.603  -7.295  1.00  4.00 
ATOM    148  O   VAL    48      -0.224   3.445  -7.879  1.00  4.00 
ATOM    149  N   THR    49      -1.244   1.489  -7.831  1.00  4.00 
ATOM    150  CA  THR    49      -0.832   1.111  -9.193  1.00  4.00 
ATOM    151  C   THR    49      -2.025   0.438  -9.842  1.00  4.00 
ATOM    152  O   THR    49      -2.028  -0.760 -10.081  1.00  4.00 
ATOM    153  N   TYR    50      -3.044   1.220 -10.086  1.00  4.00 
ATOM    154  CA  TYR    50      -4.302   0.701 -10.718  1.00  4.00 
ATOM    155  C   TYR    50      -3.926  -0.387 -11.723  1.00  4.00 
ATOM    156  O   TYR    50      -3.207  -0.110 -12.663  1.00  4.00 
ATOM    157  N   ARG    51      -4.455  -1.590 -11.537  1.00  4.00 
ATOM    158  CA  ARG    51      -4.177  -2.770 -12.447  1.00  4.00 
ATOM    159  C   ARG    51      -3.279  -2.401 -13.640  1.00  4.00 
ATOM    160  O   ARG    51      -2.212  -1.845 -13.477  1.00  4.00 
ATOM    161  N   ASP    52      -3.664  -2.750 -14.834  1.00  4.00 
ATOM    162  CA  ASP    52      -2.803  -2.433 -15.999  1.00  4.00 
ATOM    163  C   ASP    52      -3.375  -1.212 -16.701  1.00  4.00 
ATOM    164  O   ASP    52      -3.460  -1.161 -17.912  1.00  4.00 
ATOM    165  N   GLY    53      -3.797  -0.235 -15.948  1.00  4.00 
ATOM    166  CA  GLY    53      -4.394   0.963 -16.583  1.00  4.00 
ATOM    167  C   GLY    53      -3.913   2.253 -15.914  1.00  4.00 
ATOM    168  O   GLY    53      -3.515   3.180 -16.591  1.00  4.00 
ATOM    169  N   ARG    54      -3.984   2.371 -14.608  1.00  4.00 
ATOM    170  CA  ARG    54      -3.582   3.630 -13.989  1.00  4.00 
ATOM    171  C   ARG    54      -2.572   3.363 -12.865  1.00  4.00 
ATOM    172  O   ARG    54      -2.643   2.375 -12.164  1.00  4.00 
ATOM    173  N   VAL    55      -1.581   4.195 -12.715  1.00  4.00 
ATOM    174  CA  VAL    55      -0.567   3.931 -11.663  1.00  4.00 
ATOM    175  C   VAL    55       0.078   5.242 -11.211  1.00  4.00 
ATOM    176  O   VAL    55       0.846   5.847 -11.932  1.00  4.00 
ATOM    177  N   ALA    56      -0.238   5.697 -10.033  1.00  4.00 
ATOM    178  CA  ALA    56       0.349   6.983  -9.558  1.00  4.00 
ATOM    179  C   ALA    56       0.165   7.081  -8.047  1.00  4.00 
ATOM    180  O   ALA    56       0.124   6.079  -7.368  1.00  4.00 
ATOM    181  N   GLN    57       0.039   8.266  -7.510  1.00  4.00 
ATOM    182  CA  GLN    57      -0.149   8.390  -6.037  1.00  4.00 
ATOM    183  C   GLN    57      -1.605   8.078  -5.659  1.00  4.00 
ATOM    184  O   GLN    57      -2.346   7.502  -6.429  1.00  4.00 
ATOM    185  N   LEU    58      -2.014   8.428  -4.466  1.00  4.00 
ATOM    186  CA  LEU    58      -3.415   8.127  -4.039  1.00  4.00 
ATOM    187  C   LEU    58      -3.795   8.982  -2.819  1.00  4.00 
ATOM    188  O   LEU    58      -3.196   8.884  -1.755  1.00  4.00 
ATOM    189  N   GLU    59      -4.792   9.812  -2.965  1.00  4.00 
ATOM    190  CA  GLU    59      -5.235  10.669  -1.831  1.00  4.00 
ATOM    191  C   GLU    59      -6.670  11.146  -2.088  1.00  4.00 
ATOM    192  O   GLU    59      -6.926  12.333  -2.125  1.00  4.00 
ATOM    193  N   GLN    60      -7.565  10.203  -2.266  1.00  4.00 
ATOM    194  CA  GLN    60      -8.987  10.497  -2.532  1.00  4.00 
ATOM    195  C   GLN    60      -9.714  10.903  -1.246  1.00  4.00 
ATOM    196  O   GLN    60     -10.393  10.105  -0.631  1.00  4.00 
ATOM    197  N   VAL    61      -9.586  12.140  -0.844  1.00  4.00 
ATOM    198  CA  VAL    61     -10.275  12.605   0.395  1.00  4.00 
ATOM    199  C   VAL    61     -10.191  11.524   1.475  1.00  4.00 
ATOM    200  O   VAL    61     -11.070  11.393   2.302  1.00  4.00 
ATOM    201  N   TYR    62      -9.142  10.750   1.472  1.00  4.00 
ATOM    202  CA  TYR    62      -9.003   9.679   2.499  1.00  4.00 
ATOM    203  C   TYR    62      -7.972  10.116   3.546  1.00  4.00 
ATOM    204  O   TYR    62      -6.785  10.066   3.296  1.00  4.00 
ATOM    205  N   ILE    63      -8.454  10.539   4.689  1.00  4.00 
ATOM    206  CA  ILE    63      -7.588  10.996   5.789  1.00  4.00 
ATOM    207  C   ILE    63      -6.967   9.799   6.513  1.00  4.00 
ATOM    208  O   ILE    63      -6.141   9.955   7.385  1.00  4.00 
ATOM    209  N   ARG    64      -7.353   8.606   6.148  1.00  4.00 
ATOM    210  CA  ARG    64      -6.804   7.398   6.783  1.00  4.00 
ATOM    211  C   ARG    64      -5.325   7.458   6.899  1.00  4.00 
ATOM    212  O   ARG    64      -4.735   7.247   7.940  1.00  4.00 
ATOM    213  N   GLY    65      -4.723   7.633   5.785  1.00  4.00 
ATOM    214  CA  GLY    65      -3.309   7.599   5.728  1.00  4.00 
ATOM    215  C   GLY    65      -2.768   8.770   6.537  1.00  4.00 
ATOM    216  O   GLY    65      -1.687   8.727   7.098  1.00  4.00 
ATOM    217  N   SER    66      -3.550   9.808   6.623  1.00  4.00 
ATOM    218  CA  SER    66      -3.132  10.980   7.413  1.00  4.00 
ATOM    219  C   SER    66      -3.215  10.607   8.886  1.00  4.00 
ATOM    220  O   SER    66      -2.541  11.170   9.725  1.00  4.00 
ATOM    221  N   LYS    67      -4.038   9.646   9.200  1.00  4.00 
ATOM    222  CA  LYS    67      -4.172   9.209  10.617  1.00  4.00 
ATOM    223  C   LYS    67      -3.009   8.282  10.966  1.00  4.00 
ATOM    224  O   LYS    67      -2.612   8.163  12.108  1.00  4.00 
ATOM    225  N   ILE    68      -2.455   7.629   9.982  1.00  4.00 
ATOM    226  CA  ILE    68      -1.320   6.718  10.226  1.00  4.00 
ATOM    227  C   ILE    68      -0.066   7.555  10.469  1.00  4.00 
ATOM    228  O   ILE    68       0.803   7.197  11.239  1.00  4.00 
ATOM    229  N   ARG    69       0.019   8.672   9.814  1.00  4.00 
ATOM    230  CA  ARG    69       1.171   9.557   9.975  1.00  4.00 
ATOM    231  C   ARG    69       0.937  10.403  11.208  1.00  4.00 
ATOM    232  O   ARG    69       1.842  10.817  11.906  1.00  4.00 
ATOM    233  N   PHE    70      -0.309  10.651  11.455  1.00  4.00 
ATOM    234  CA  PHE    70      -0.735  11.458  12.606  1.00  4.00 
ATOM    235  C   PHE    70      -0.439  10.736  13.913  1.00  4.00 
ATOM    236  O   PHE    70      -0.195  11.344  14.936  1.00  4.00 
ATOM    237  N   LEU    71      -0.478   9.443  13.886  1.00  4.00 
ATOM    238  CA  LEU    71      -0.220   8.663  15.127  1.00  4.00 
ATOM    239  C   LEU    71       1.210   8.898  15.607  1.00  4.00 
ATOM    240  O   LEU    71       1.515   8.707  16.765  1.00  4.00 
ATOM    241  N   ILE    72       2.090   9.328  14.746  1.00  4.00 
ATOM    242  CA  ILE    72       3.480   9.591  15.205  1.00  4.00 
ATOM    243  C   ILE    72       3.410  10.724  16.226  1.00  4.00 
ATOM    244  O   ILE    72       3.754  10.566  17.381  1.00  4.00 
ATOM    245  N   LEU    73       2.936  11.861  15.802  1.00  4.00 
ATOM    246  CA  LEU    73       2.796  13.013  16.709  1.00  4.00 
ATOM    247  C   LEU    73       2.039  12.603  17.956  1.00  4.00 
ATOM    248  O   LEU    73       2.488  12.758  19.075  1.00  4.00 
ATOM    249  N   PRO    74       0.871  12.098  17.742  1.00  4.00 
ATOM    250  CA  PRO    74       0.002  11.666  18.860  1.00  4.00 
ATOM    251  C   PRO    74       0.748  10.679  19.762  1.00  4.00 
ATOM    252  O   PRO    74       0.476  10.580  20.942  1.00  4.00 
ATOM    253  N   ASP    75       1.684   9.944  19.224  1.00  4.00 
ATOM    254  CA  ASP    75       2.429   8.972  20.063  1.00  4.00 
ATOM    255  C   ASP    75       3.346   9.728  20.994  1.00  4.00 
ATOM    256  O   ASP    75       3.621   9.334  22.110  1.00  4.00 
TER 
END 
