REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0059AL215_1_2 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0059  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1ice_B 
ATOM      1  N   ASN    23      31.164  74.606   4.150  1.00  0.00              
ATOM      2  CA  ASN    23      31.704  75.845   3.637  1.00  0.00              
ATOM      3  C   ASN    23      33.207  75.829   3.341  1.00  0.00              
ATOM      4  O   ASN    23      33.784  76.835   2.980  1.00  0.00              
ATOM      5  N   THR    24      33.942  74.732   3.472  1.00  0.00              
ATOM      6  CA  THR    24      35.374  74.816   3.265  1.00  0.00              
ATOM      7  C   THR    24      35.995  73.658   2.559  1.00  0.00              
ATOM      8  O   THR    24      37.157  73.725   2.212  1.00  0.00              
ATOM      9  N   GLY    25      35.294  72.566   2.314  1.00  0.00              
ATOM     10  CA  GLY    25      35.899  71.479   1.600  1.00  0.00              
ATOM     11  C   GLY    25      36.670  70.569   2.513  1.00  0.00              
ATOM     12  O   GLY    25      36.448  70.522   3.715  1.00  0.00              
ATOM     13  N   GLU    26      37.609  69.802   1.993  1.00  0.00              
ATOM     14  CA  GLU    26      38.217  68.772   2.784  1.00  0.00              
ATOM     15  C   GLU    26      39.572  69.210   3.271  1.00  0.00              
ATOM     16  O   GLU    26      40.368  69.820   2.554  1.00  0.00              
ATOM     17  N   VAL    27      39.878  68.890   4.539  1.00  0.00              
ATOM     18  CA  VAL    27      41.087  69.422   5.149  1.00  0.00              
ATOM     19  C   VAL    27      42.296  69.025   4.323  1.00  0.00              
ATOM     20  O   VAL    27      43.172  69.839   4.062  1.00  0.00              
ATOM     21  N   TYR    28      42.369  67.765   3.879  1.00  0.00              
ATOM     22  CA  TYR    28      43.533  67.287   3.172  1.00  0.00              
ATOM     23  C   TYR    28      43.713  68.086   1.915  1.00  0.00              
ATOM     24  O   TYR    28      44.789  68.598   1.672  1.00  0.00              
ATOM     25  N   ARG    29      42.681  68.233   1.085  1.00  0.00              
ATOM     26  CA  ARG    29      42.836  68.863  -0.225  1.00  0.00              
ATOM     27  C   ARG    29      43.332  70.303  -0.004  1.00  0.00              
ATOM     28  O   ARG    29      44.284  70.773  -0.629  1.00  0.00              
ATOM     29  N   GLY    30      42.695  71.046   0.916  1.00  0.00              
ATOM     30  CA  GLY    30      43.126  72.407   1.229  1.00  0.00              
ATOM     31  C   GLY    30      44.581  72.445   1.627  1.00  0.00              
ATOM     32  O   GLY    30      45.407  73.154   1.058  1.00  0.00              
ATOM     33  N   LYS    31      44.966  71.665   2.639  1.00  0.00              
ATOM     34  CA  LYS    31      46.360  71.623   3.047  1.00  0.00              
ATOM     35  C   LYS    31      47.310  71.257   1.917  1.00  0.00              
ATOM     36  O   LYS    31      48.426  71.779   1.841  1.00  0.00              
ATOM     37  N   LEU    32      46.886  70.354   1.030  1.00  0.00              
ATOM     38  CA  LEU    32      47.690  69.938  -0.107  1.00  0.00              
ATOM     39  C   LEU    32      47.907  71.083  -1.071  1.00  0.00              
ATOM     40  O   LEU    32      49.000  71.377  -1.534  1.00  0.00              
ATOM     41  N   ILE    33      46.844  71.788  -1.412  1.00  0.00              
ATOM     42  CA  ILE    33      46.993  73.000  -2.188  1.00  0.00              
ATOM     43  C   ILE    33      47.959  73.971  -1.489  1.00  0.00              
ATOM     44  O   ILE    33      48.949  74.391  -2.086  1.00  0.00              
ATOM     45  N   GLU    34      47.742  74.356  -0.211  1.00  0.00              
ATOM     46  CA  GLU    34      48.619  75.329   0.462  1.00  0.00              
ATOM     47  C   GLU    34      50.055  74.929   0.299  1.00  0.00              
ATOM     48  O   GLU    34      50.928  75.688  -0.074  1.00  0.00              
ATOM     49  N   ALA    35      50.332  73.662   0.585  1.00  0.00              
ATOM     50  CA  ALA    35      51.701  73.193   0.495  1.00  0.00              
ATOM     51  C   ALA    35      52.217  73.203  -0.903  1.00  0.00              
ATOM     52  O   ALA    35      53.358  73.576  -1.148  1.00  0.00              
ATOM     53  N   GLU    36      51.404  72.804  -1.879  1.00  0.00              
ATOM     54  CA  GLU    36      51.880  72.843  -3.253  1.00  0.00              
ATOM     55  C   GLU    36      52.168  74.271  -3.610  1.00  0.00              
ATOM     56  O   GLU    36      53.201  74.562  -4.190  1.00  0.00              
ATOM     57  N   ASP    37      51.304  75.228  -3.290  1.00  0.00              
ATOM     58  CA  ASP    37      51.575  76.590  -3.711  1.00  0.00              
ATOM     59  C   ASP    37      52.905  77.132  -3.235  1.00  0.00              
ATOM     60  O   ASP    37      53.682  77.703  -3.991  1.00  0.00              
ATOM     61  N   ASN    38      53.156  76.934  -1.939  1.00  0.00              
ATOM     62  CA  ASN    38      54.393  77.343  -1.279  1.00  0.00              
ATOM     63  C   ASN    38      55.591  76.520  -1.738  1.00  0.00              
ATOM     64  O   ASN    38      56.680  77.030  -1.956  1.00  0.00              
ATOM     65  N   MET    39      55.463  75.202  -1.909  1.00  0.00              
ATOM     66  CA  MET    39      56.670  74.409  -2.053  1.00  0.00              
ATOM     67  C   MET    39      56.915  73.868  -3.396  1.00  0.00              
ATOM     68  O   MET    39      58.000  73.359  -3.624  1.00  0.00              
ATOM     69  N   ASN    40      55.971  73.946  -4.328  1.00  0.00              
ATOM     70  CA  ASN    40      56.187  73.348  -5.625  1.00  0.00              
ATOM     71  C   ASN    40      57.495  73.772  -6.239  1.00  0.00              
ATOM     72  O   ASN    40      58.162  72.984  -6.879  1.00  0.00              
ATOM     73  N   CYS    41      57.906  75.028  -6.070  1.00  0.00              
ATOM     74  CA  CYS    41      59.228  75.459  -6.523  1.00  0.00              
ATOM     75  C   CYS    41      60.436  74.709  -5.968  1.00  0.00              
ATOM     76  O   CYS    41      61.188  74.012  -6.629  1.00  0.00              
ATOM     77  N   GLN    42      60.677  74.835  -4.683  1.00  0.00              
ATOM     78  CA  GLN    42      61.870  74.283  -4.103  1.00  0.00              
ATOM     79  C   GLN    42      61.869  72.823  -3.715  1.00  0.00              
ATOM     80  O   GLN    42      62.927  72.273  -3.447  1.00  0.00              
ATOM     81  N   MET    43      60.755  72.110  -3.647  1.00  0.00              
ATOM     82  CA  MET    43      60.819  70.756  -3.146  1.00  0.00              
ATOM     83  C   MET    43      60.335  69.751  -4.139  1.00  0.00              
ATOM     84  O   MET    43      59.358  70.049  -4.783  1.00  0.00              
ATOM     85  N   SER    44      60.915  68.569  -4.336  1.00  0.00              
ATOM     86  CA  SER    44      60.250  67.570  -5.132  1.00  0.00              
ATOM     87  C   SER    44      58.928  67.101  -4.562  1.00  0.00              
ATOM     88  O   SER    44      58.614  67.338  -3.401  1.00  0.00              
ATOM     89  N   ASN    45      58.103  66.406  -5.340  1.00  0.00              
ATOM     90  CA  ASN    45      56.762  66.034  -4.907  1.00  0.00              
ATOM     91  C   ASN    45      56.749  65.148  -3.668  1.00  0.00              
ATOM     92  O   ASN    45      55.923  65.319  -2.780  1.00  0.00              
ATOM     93  N   ILE    46      57.647  64.174  -3.530  1.00  0.00              
ATOM     94  CA  ILE    46      57.700  63.422  -2.287  1.00  0.00              
ATOM     95  C   ILE    46      57.970  64.293  -1.061  1.00  0.00              
ATOM     96  O   ILE    46      57.267  64.193  -0.067  1.00  0.00              
ATOM     97  N   THR    47      58.948  65.188  -1.013  1.00  0.00              
ATOM     98  CA  THR    47      59.060  66.018   0.168  1.00  0.00              
ATOM     99  C   THR    47      57.882  66.933   0.367  1.00  0.00              
ATOM    100  O   THR    47      57.490  67.192   1.496  1.00  0.00              
ATOM    101  N   VAL    48      57.230  67.484  -0.644  1.00  0.00              
ATOM    102  CA  VAL    48      56.017  68.243  -0.353  1.00  0.00              
ATOM    103  C   VAL    48      55.001  67.359   0.360  1.00  0.00              
ATOM    104  O   VAL    48      54.296  67.766   1.279  1.00  0.00              
ATOM    105  N   THR    49      54.883  66.097  -0.029  1.00  0.00              
ATOM    106  CA  THR    49      53.871  65.260   0.590  1.00  0.00              
ATOM    107  C   THR    49      54.194  65.032   2.035  1.00  0.00              
ATOM    108  O   THR    49      53.330  65.034   2.906  1.00  0.00              
ATOM    109  N   TYR    50      55.476  64.833   2.333  1.00  0.00              
ATOM    110  CA  TYR    50      55.871  64.650   3.716  1.00  0.00              
ATOM    111  C   TYR    50      55.455  65.834   4.576  1.00  0.00              
ATOM    112  O   TYR    50      54.847  65.737   5.637  1.00  0.00              
ATOM    113  N   ARG    51      55.790  67.029   4.099  1.00  0.00              
ATOM    114  CA  ARG    51      55.406  68.237   4.799  1.00  0.00              
ATOM    115  C   ARG    51      53.897  68.348   5.016  1.00  0.00              
ATOM    116  O   ARG    51      53.420  68.937   5.978  1.00  0.00              
ATOM    117  N   ASP    52      53.047  67.804   4.144  1.00  0.00              
ATOM    118  CA  ASP    52      51.618  67.770   4.430  1.00  0.00              
ATOM    119  C   ASP    52      51.392  66.781   5.541  1.00  0.00              
ATOM    120  O   ASP    52      50.547  67.045   6.378  1.00  0.00              
ATOM    121  N   GLY    53      52.100  65.649   5.613  1.00  0.00              
ATOM    122  CA  GLY    53      51.869  64.733   6.722  1.00  0.00              
ATOM    123  C   GLY    53      52.279  65.393   8.012  1.00  0.00              
ATOM    124  O   GLY    53      51.580  65.378   9.013  1.00  0.00              
ATOM    125  N   ARG    54      53.439  66.029   8.056  1.00  0.00              
ATOM    126  CA  ARG    54      53.850  66.716   9.258  1.00  0.00              
ATOM    127  C   ARG    54      52.786  67.747   9.646  1.00  0.00              
ATOM    128  O   ARG    54      52.523  67.961  10.825  1.00  0.00              
ATOM    129  N   VAL    55      52.088  68.443   8.738  1.00  0.00              
ATOM    130  CA  VAL    55      51.056  69.373   9.187  1.00  0.00              
ATOM    131  C   VAL    55      49.920  68.726   9.903  1.00  0.00              
ATOM    132  O   VAL    55      49.064  69.380  10.469  1.00  0.00              
ATOM    133  N   ALA    56      49.890  67.404   9.885  1.00  0.00              
ATOM    134  CA  ALA    56      48.831  66.668  10.531  1.00  0.00              
ATOM    135  C   ALA    56      49.328  66.019  11.808  1.00  0.00              
ATOM    136  O   ALA    56      48.614  65.252  12.434  1.00  0.00              
ATOM    137  N   GLN    57      50.558  66.292  12.258  1.00  0.00              
ATOM    138  CA  GLN    57      51.077  65.539  13.381  1.00  0.00              
ATOM    139  C   GLN    57      50.437  65.853  14.715  1.00  0.00              
ATOM    140  O   GLN    57      50.315  64.969  15.545  1.00  0.00              
ATOM    141  N   LEU    58      49.995  67.063  15.058  1.00  0.00              
ATOM    142  CA  LEU    58      49.279  67.215  16.327  1.00  0.00              
ATOM    143  C   LEU    58      47.822  66.924  16.049  1.00  0.00              
ATOM    144  O   LEU    58      47.301  67.608  15.179  1.00  0.00              
ATOM    145  N   GLU    59      47.074  66.045  16.611  1.00  0.00              
ATOM    146  CA  GLU    59      45.664  65.892  16.283  1.00  0.00              
ATOM    147  C   GLU    59      44.885  67.133  16.570  1.00  0.00              
ATOM    148  O   GLU    59      44.637  67.542  17.693  1.00  0.00              
ATOM    149  N   GLN    60      44.488  67.761  15.475  1.00  0.00              
ATOM    150  CA  GLN    60      43.728  68.995  15.466  1.00  0.00              
ATOM    151  C   GLN    60      42.322  68.734  16.013  1.00  0.00              
ATOM    152  O   GLN    60      41.317  69.178  15.477  1.00  0.00              
ATOM    153  N   VAL    61      42.156  68.002  17.110  1.00  0.00              
ATOM    154  CA  VAL    61      40.831  67.507  17.442  1.00  0.00              
ATOM    155  C   VAL    61      40.445  66.438  16.440  1.00  0.00              
ATOM    156  O   VAL    61      40.709  65.265  16.634  1.00  0.00              
ATOM    157  N   TYR    62      39.813  66.785  15.333  1.00  0.00              
ATOM    158  CA  TYR    62      39.636  65.848  14.234  1.00  0.00              
ATOM    159  C   TYR    62      40.983  65.328  13.752  1.00  0.00              
ATOM    160  O   TYR    62      41.784  66.095  13.240  1.00  0.00              
ATOM    161  N   ILE    63      41.341  64.058  13.870  1.00  0.00              
ATOM    162  CA  ILE    63      42.640  63.659  13.368  1.00  0.00              
ATOM    163  C   ILE    63      42.590  62.873  12.088  1.00  0.00              
ATOM    164  O   ILE    63      41.685  62.079  11.861  1.00  0.00              
ATOM    165  N   ARG    64      43.571  63.083  11.216  1.00  0.00              
ATOM    166  CA  ARG    64      43.812  62.141  10.155  1.00  0.00              
ATOM    167  C   ARG    64      45.273  62.271   9.913  1.00  0.00              
ATOM    168  O   ARG    64      45.902  63.207  10.375  1.00  0.00              
ATOM    169  N   GLY    65      45.845  61.331   9.186  1.00  0.00              
ATOM    170  CA  GLY    65      47.266  61.335   8.862  1.00  0.00              
ATOM    171  C   GLY    65      47.307  60.828   7.464  1.00  0.00              
ATOM    172  O   GLY    65      47.155  59.624   7.339  1.00  0.00              
ATOM    173  N   SER    66      47.473  61.606   6.462  1.00  0.00              
ATOM    174  CA  SER    66      47.565  61.155   5.092  1.00  0.00              
ATOM    175  C   SER    66      48.667  60.176   4.923  1.00  0.00              
ATOM    176  O   SER    66      49.642  60.253   5.655  1.00  0.00              
END
