REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0059AL003_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : HUBBARD 
REMARK  ---------------------------------------------------------- 
TARGET     T0059  
AUTHOR     7545-6133-3082  
REMARK       
METHOD   blastp was used to find homologous sequences of which a multiple    
METHOD   sequences alignment was build and used as seed for HMMer. The  
METHOD   resulting hmm was used to search against a version of pdb which  
METHOD   only contains proteins of less than 90% homology. This found   
METHOD   a hit with very high confidence, thus this one was choosen as  
METHOD    parent.  
MODEL 1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1pkr 
ATOM      1  N   THR    19      42.833  -3.302   2.220  1.00  0.00              
ATOM      2  CA  THR    19      42.088  -3.161   3.434  1.00  0.00              
ATOM      3  C   THR    19      40.613  -3.503   3.153  1.00  0.00              
ATOM      4  O   THR    19      39.831  -2.689   2.673  1.00  0.00              
ATOM      5  N   CYS    20      40.343  -4.702   3.559  1.00  0.00              
ATOM      6  CA  CYS    20      38.993  -5.262   3.480  1.00  0.00              
ATOM      7  C   CYS    20      39.082  -6.351   4.579  1.00  0.00              
ATOM      8  O   CYS    20      40.177  -6.753   5.016  1.00  0.00              
ATOM      9  N   GLU    21      37.871  -6.705   4.968  1.00  0.00              
ATOM     10  CA  GLU    21      37.752  -7.699   6.031  1.00  0.00              
ATOM     11  C   GLU    21      37.023  -8.916   5.474  1.00  0.00              
ATOM     12  O   GLU    21      36.291  -8.823   4.507  1.00  0.00              
ATOM     13  N   THR    22      37.262  -9.997   6.159  1.00  0.00              
ATOM     14  CA  THR    22      36.652 -11.279   5.876  1.00  0.00              
ATOM     15  C   THR    22      36.759 -12.012   7.228  1.00  0.00              
ATOM     16  O   THR    22      37.897 -12.088   7.723  1.00  0.00              
ATOM     17  N   ASN    23      35.614 -12.445   7.691  1.00  0.00              
ATOM     18  CA  ASN    23      35.602 -13.169   8.993  1.00  0.00              
ATOM     19  C   ASN    23      35.605 -12.188  10.158  1.00  0.00              
ATOM     20  O   ASN    23      35.132 -11.052   9.979  1.00  0.00              
ATOM     21  N   THR    24      36.083 -12.641  11.299  1.00  0.00              
ATOM     22  CA  THR    24      36.121 -11.769  12.477  1.00  0.00              
ATOM     23  C   THR    24      37.212 -10.734  12.245  1.00  0.00              
ATOM     24  O   THR    24      37.481  -9.964  13.160  1.00  0.00              
ATOM     25  N   GLY    25      37.840 -10.763  11.106  1.00  0.00              
ATOM     26  CA  GLY    25      38.920  -9.845  10.730  1.00  0.00              
ATOM     27  C   GLY    25      40.207 -10.214  11.465  1.00  0.00              
ATOM     28  O   GLY    25      40.975  -9.298  11.834  1.00  0.00              
ATOM     29  N   GLU    26      40.441 -11.495  11.651  1.00  0.00              
ATOM     30  CA  GLU    26      41.635 -12.003  12.335  1.00  0.00              
ATOM     31  C   GLU    26      42.990 -11.740  11.681  1.00  0.00              
ATOM     32  O   GLU    26      44.018 -11.468  12.358  1.00  0.00              
ATOM     33  N   VAL    27      43.039 -11.856  10.358  1.00  0.00              
ATOM     34  CA  VAL    27      44.274 -11.683   9.600  1.00  0.00              
ATOM     35  C   VAL    27      44.390 -10.263   9.021  1.00  0.00              
ATOM     36  O   VAL    27      45.306 -10.044   8.212  1.00  0.00              
ATOM     37  N   TYR    28      43.458  -9.449   9.462  1.00  0.00              
ATOM     38  CA  TYR    28      43.364  -8.080   8.983  1.00  0.00              
ATOM     39  C   TYR    28      44.605  -7.281   9.348  1.00  0.00              
ATOM     40  O   TYR    28      44.785  -7.027  10.551  1.00  0.00              
ATOM     41  N   ARG    29      45.303  -6.906   8.299  1.00  0.00              
ATOM     42  CA  ARG    29      46.503  -6.073   8.458  1.00  0.00              
ATOM     43  C   ARG    29      46.315  -4.748   7.712  1.00  0.00              
ATOM     44  O   ARG    29      47.299  -4.222   7.155  1.00  0.00              
ATOM     45  N   GLY    30      45.072  -4.270   7.722  1.00  0.00              
ATOM     46  CA  GLY    30      44.624  -3.051   7.117  1.00  0.00              
ATOM     47  C   GLY    30      45.237  -1.834   7.821  1.00  0.00              
ATOM     48  O   GLY    30      46.011  -1.984   8.775  1.00  0.00              
ATOM     49  N   LYS    31      44.785  -0.670   7.379  1.00  0.00              
ATOM     50  CA  LYS    31      45.276   0.625   7.833  1.00  0.00              
ATOM     51  C   LYS    31      44.337   1.588   8.505  1.00  0.00              
ATOM     52  O   LYS    31      44.783   2.762   8.674  1.00  0.00              
ATOM     53  N   LEU    32      43.154   1.152   8.858  1.00  0.00              
ATOM     54  CA  LEU    32      42.138   1.970   9.554  1.00  0.00              
ATOM     55  C   LEU    32      42.625   2.201  11.007  1.00  0.00              
ATOM     56  O   LEU    32      43.072   1.202  11.612  1.00  0.00              
ATOM     57  N   ILE    33      42.429   3.444  11.426  1.00  0.00              
ATOM     58  CA  ILE    33      42.840   3.884  12.760  1.00  0.00              
ATOM     59  C   ILE    33      41.808   4.676  13.549  1.00  0.00              
ATOM     60  O   ILE    33      42.237   5.404  14.445  1.00  0.00              
ATOM     61  N   GLU    34      40.555   4.558  13.202  1.00  0.00              
ATOM     62  CA  GLU    34      39.429   5.225  13.856  1.00  0.00              
ATOM     63  C   GLU    34      38.317   4.171  13.980  1.00  0.00              
ATOM     64  O   GLU    34      38.137   3.171  13.246  1.00  0.00              
ATOM     65  N   ALA    35      37.544   4.397  15.031  1.00  0.00              
ATOM     66  CA  ALA    35      36.451   3.425  15.295  1.00  0.00              
ATOM     67  C   ALA    35      35.250   3.796  14.434  1.00  0.00              
ATOM     68  O   ALA    35      35.221   4.803  13.700  1.00  0.00              
ATOM     69  N   GLU    36      34.267   2.938  14.589  1.00  0.00              
ATOM     70  CA  GLU    36      32.970   3.018  13.934  1.00  0.00              
ATOM     71  C   GLU    36      32.249   4.335  14.156  1.00  0.00              
ATOM     72  O   GLU    36      31.368   4.678  13.346  1.00  0.00              
ATOM     73  N   ASP    37      32.586   5.130  15.144  1.00  0.00              
ATOM     74  CA  ASP    37      32.018   6.415  15.510  1.00  0.00              
ATOM     75  C   ASP    37      33.015   7.565  15.267  1.00  0.00              
ATOM     76  O   ASP    37      32.923   8.642  15.897  1.00  0.00              
ATOM     77  N   ASN    38      33.904   7.254  14.369  1.00  0.00              
ATOM     78  CA  ASN    38      34.898   8.222  13.950  1.00  0.00              
ATOM     79  C   ASN    38      35.802   8.824  15.000  1.00  0.00              
ATOM     80  O   ASN    38      36.322   9.946  14.791  1.00  0.00              
ATOM     81  N   MET    39      35.985   8.064  16.060  1.00  0.00              
ATOM     82  CA  MET    39      36.932   8.548  17.099  1.00  0.00              
ATOM     83  C   MET    39      38.165   7.667  16.865  1.00  0.00              
ATOM     84  O   MET    39      38.127   6.447  16.610  1.00  0.00              
ATOM     85  N   ASN    40      39.286   8.386  16.877  1.00  0.00              
ATOM     86  CA  ASN    40      40.615   7.826  16.616  1.00  0.00              
ATOM     87  C   ASN    40      41.207   6.969  17.700  1.00  0.00              
ATOM     88  O   ASN    40      41.178   7.258  18.917  1.00  0.00              
ATOM     89  N   CYS    41      41.753   5.869  17.192  1.00  0.00              
ATOM     90  CA  CYS    41      42.410   4.814  17.958  1.00  0.00              
ATOM     91  C   CYS    41      43.667   5.282  18.682  1.00  0.00              
ATOM     92  O   CYS    41      44.329   6.204  18.213  1.00  0.00              
ATOM     93  N   GLN    42      43.905   4.639  19.816  1.00  0.00              
ATOM     94  CA  GLN    42      45.079   4.872  20.675  1.00  0.00              
ATOM     95  C   GLN    42      46.183   3.896  20.270  1.00  0.00              
ATOM     96  O   GLN    42      45.876   2.693  19.971  1.00  0.00              
ATOM     97  N   MET    43      47.421   4.394  20.237  1.00  0.00              
ATOM     98  CA  MET    43      48.542   3.482  19.824  1.00  0.00              
ATOM     99  C   MET    43      48.556   2.334  20.862  1.00  0.00              
ATOM    100  O   MET    43      48.480   2.591  22.078  1.00  0.00              
ATOM    101  N   SER    44      48.631   1.132  20.350  1.00  0.00              
ATOM    102  CA  SER    44      48.669  -0.121  21.083  1.00  0.00              
ATOM    103  C   SER    44      49.960  -0.197  21.937  1.00  0.00              
ATOM    104  O   SER    44      50.035  -1.061  22.843  1.00  0.00              
ATOM    105  N   ASN    45      50.923   0.644  21.582  1.00  0.00              
ATOM    106  CA  ASN    45      52.200   0.681  22.332  1.00  0.00              
ATOM    107  C   ASN    45      52.046   1.593  23.554  1.00  0.00              
ATOM    108  O   ASN    45      52.574   1.300  24.646  1.00  0.00              
ATOM    109  N   ILE    46      51.297   2.645  23.395  1.00  0.00              
ATOM    110  CA  ILE    46      50.976   3.692  24.358  1.00  0.00              
ATOM    111  C   ILE    46      50.169   3.191  25.521  1.00  0.00              
ATOM    112  O   ILE    46      49.517   2.147  25.384  1.00  0.00              
ATOM    113  N   THR    47      50.206   3.865  26.655  1.00  0.00              
ATOM    114  CA  THR    47      49.500   3.482  27.890  1.00  0.00              
ATOM    115  C   THR    47      48.545   4.522  28.474  1.00  0.00              
ATOM    116  O   THR    47      48.269   4.537  29.695  1.00  0.00              
ATOM    117  N   VAL    48      48.000   5.387  27.657  1.00  0.00              
ATOM    118  CA  VAL    48      47.029   6.416  28.016  1.00  0.00              
ATOM    119  C   VAL    48      46.218   6.762  26.740  1.00  0.00              
ATOM    120  O   VAL    48      46.733   6.633  25.617  1.00  0.00              
ATOM    121  N   THR    49      44.957   7.161  26.903  1.00  0.00              
ATOM    122  CA  THR    49      44.298   7.333  28.203  1.00  0.00              
ATOM    123  C   THR    49      44.091   5.932  28.815  1.00  0.00              
ATOM    124  O   THR    49      43.850   5.755  30.016  1.00  0.00              
ATOM    125  N   TYR    50      44.191   4.914  27.983  1.00  0.00              
ATOM    126  CA  TYR    50      43.998   3.529  28.408  1.00  0.00              
ATOM    127  C   TYR    50      45.270   2.687  28.386  1.00  0.00              
ATOM    128  O   TYR    50      46.187   2.925  27.582  1.00  0.00              
ATOM    129  N   ARG    51      45.293   1.678  29.235  1.00  0.00              
ATOM    130  CA  ARG    51      46.399   0.730  29.326  1.00  0.00              
ATOM    131  C   ARG    51      45.967  -0.553  28.589  1.00  0.00              
ATOM    132  O   ARG    51      45.086  -1.270  29.069  1.00  0.00              
ATOM    133  N   ASP    52      46.598  -0.837  27.460  1.00  0.00              
ATOM    134  CA  ASP    52      46.264  -1.997  26.653  1.00  0.00              
ATOM    135  C   ASP    52      46.741  -3.309  27.306  1.00  0.00              
ATOM    136  O   ASP    52      47.818  -3.458  27.918  1.00  0.00              
ATOM    137  N   GLY    53      45.888  -4.304  27.142  1.00  0.00              
ATOM    138  CA  GLY    53      45.976  -5.675  27.605  1.00  0.00              
ATOM    139  C   GLY    53      46.722  -6.500  26.537  1.00  0.00              
ATOM    140  O   GLY    53      47.094  -7.666  26.769  1.00  0.00              
ATOM    141  N   ARG    54      46.889  -5.851  25.403  1.00  0.00              
ATOM    142  CA  ARG    54      47.598  -6.425  24.251  1.00  0.00              
ATOM    143  C   ARG    54      48.530  -5.336  23.702  1.00  0.00              
ATOM    144  O   ARG    54      48.147  -4.153  23.609  1.00  0.00              
ATOM    145  N   VAL    55      49.717  -5.791  23.334  1.00  0.00              
ATOM    146  CA  VAL    55      50.705  -4.855  22.743  1.00  0.00              
ATOM    147  C   VAL    55      51.724  -5.609  21.895  1.00  0.00              
ATOM    148  O   VAL    55      51.788  -6.842  21.914  1.00  0.00              
ATOM    149  N   ALA    56      50.584 -10.412  16.321  1.00  0.00              
ATOM    150  CA  ALA    56      49.266  -9.812  16.189  1.00  0.00              
ATOM    151  C   ALA    56      49.077  -8.538  15.443  1.00  0.00              
ATOM    152  O   ALA    56      47.904  -8.103  15.395  1.00  0.00              
ATOM    153  N   GLN    57      50.067  -7.897  14.867  1.00  0.00              
ATOM    154  CA  GLN    57      49.942  -6.694  14.041  1.00  0.00              
ATOM    155  C   GLN    57      49.585  -5.404  14.785  1.00  0.00              
ATOM    156  O   GLN    57      48.890  -4.533  14.233  1.00  0.00              
ATOM    157  N   LEU    58      50.099  -5.290  15.986  1.00  0.00              
ATOM    158  CA  LEU    58      49.824  -4.143  16.869  1.00  0.00              
ATOM    159  C   LEU    58      50.698  -2.936  16.541  1.00  0.00              
ATOM    160  O   LEU    58      51.365  -2.371  17.426  1.00  0.00              
ATOM    161  N   GLU    59      50.652  -2.564  15.283  1.00  0.00              
ATOM    162  CA  GLU    59      51.425  -1.432  14.785  1.00  0.00              
ATOM    163  C   GLU    59      50.556  -0.172  14.650  1.00  0.00              
ATOM    164  O   GLU    59      49.380  -0.248  14.235  1.00  0.00              
ATOM    165  N   GLN    60      51.200   0.940  15.026  1.00  0.00              
ATOM    166  CA  GLN    60      50.556   2.259  14.969  1.00  0.00              
ATOM    167  C   GLN    60      49.301   2.234  15.834  1.00  0.00              
ATOM    168  O   GLN    60      49.377   1.687  16.965  1.00  0.00              
ATOM    169  N   VAL    61      48.226   2.773  15.307  1.00  0.00              
ATOM    170  CA  VAL    61      46.956   2.817  16.093  1.00  0.00              
ATOM    171  C   VAL    61      45.859   2.248  15.219  1.00  0.00              
ATOM    172  O   VAL    61      44.745   2.787  15.091  1.00  0.00              
ATOM    173  N   TYR    62      46.173   1.134  14.595  1.00  0.00              
ATOM    174  CA  TYR    62      45.228   0.471  13.700  1.00  0.00              
ATOM    175  C   TYR    62      44.413  -0.587  14.458  1.00  0.00              
ATOM    176  O   TYR    62      44.860  -1.117  15.460  1.00  0.00              
ATOM    177  N   ILE    63      43.281  -0.851  13.868  1.00  0.00              
ATOM    178  CA  ILE    63      42.233  -1.776  14.213  1.00  0.00              
ATOM    179  C   ILE    63      42.753  -3.199  13.958  1.00  0.00              
ATOM    180  O   ILE    63      43.074  -3.572  12.820  1.00  0.00              
ATOM    181  N   ARG    64      42.853  -3.949  15.048  1.00  0.00              
ATOM    182  CA  ARG    64      43.301  -5.355  15.013  1.00  0.00              
ATOM    183  C   ARG    64      42.269  -6.224  15.758  1.00  0.00              
ATOM    184  O   ARG    64      41.200  -5.746  16.164  1.00  0.00              
ATOM    185  N   LEU    73      42.609  -7.489  15.901  1.00  0.00              
ATOM    186  CA  LEU    73      41.773  -8.479  16.612  1.00  0.00              
ATOM    187  C   LEU    73      42.714  -9.508  17.244  1.00  0.00              
ATOM    188  O   LEU    73      42.789 -10.663  16.789  1.00  0.00              
ATOM    189  N   PRO    74      43.442  -9.074  18.286  1.00  0.00              
ATOM    190  CA  PRO    74      44.435  -9.891  18.981  1.00  0.00              
ATOM    191  C   PRO    74      43.859 -11.092  19.730  1.00  0.00              
ATOM    192  O   PRO    74      44.639 -11.941  20.203  1.00  0.00              
ATOM    193  N   ASP    75      42.540 -11.004  19.798  1.00  0.00              
ATOM    194  CA  ASP    75      41.852 -12.023  20.609  1.00  0.00              
ATOM    195  C   ASP    75      40.757 -12.794  19.922  1.00  0.00              
ATOM    196  O   ASP    75      39.974 -13.492  20.617  1.00  0.00              
END
