REMARK  ---------------------------------------------------------- 
REMARK  Molecule : T0058AL215_1_1 
REMARK  Alignment model prepared for CASP3 experiment 
REMARK  by group : ZHU-JUN 
REMARK  ---------------------------------------------------------- 
TARGET     T0058  
AUTHOR     4070-8855-4894  
METHOD     The target is compared with PDB25 database (U.Hobohm et al., 1992).  
METHOD     For each structure in PDB25, a model is built in the following way:  
METHOD     the sequence (query) is compared with NR database using transitive   
METHOD     BLAST (Neuwald et al. 1997). Similar sequences are collected and   
METHOD     purged at score 150.  Those sequences are aligned with query   
METHOD     sequence using Bayesian aligner (Zhu et al., 1998) and a   
METHOD     profile-like model is built (Lawrence et al. 1993; Gribskov et al.,  
METHOD     1987; unpublished result by Jun Zhu, Roland Luthy and Charlse E.   
METHOD     Lawrence).  Then, the target file is compared with the models   
METHOD     derived from PDB25.  
MODEL     1  
REMARK  ---------------------------------------------------------- 
REMARK  AL2TS service [v. 08/06/1998]: Adam Zemla, adamz@llnl.gov 
REMARK  ---------------------------------------------------------- 
REMARK  Coordinates assigned from PDB entry: 1akz 
ATOM      1  N   MET     1       8.404 -28.018 -23.118  1.00  0.00              
ATOM      2  CA  MET     1       7.885 -29.392 -23.181  1.00  0.00              
ATOM      3  C   MET     1       6.382 -29.437 -22.990  1.00  0.00              
ATOM      4  O   MET     1       5.795 -28.529 -22.387  1.00  0.00              
ATOM      5  N   ALA     2       5.768 -30.501 -23.496  1.00  0.00              
ATOM      6  CA  ALA     2       4.322 -30.673 -23.373  1.00  0.00              
ATOM      7  C   ALA     2       3.591 -29.488 -23.995  1.00  0.00              
ATOM      8  O   ALA     2       2.510 -29.124 -23.556  1.00  0.00              
ATOM      9  N   ASN     3       4.209 -28.896 -25.007  1.00  0.00              
ATOM     10  CA  ASN     3       3.667 -27.724 -25.678  1.00  0.00              
ATOM     11  C   ASN     3       3.557 -28.060 -27.135  1.00  0.00              
ATOM     12  O   ASN     3       4.547 -28.439 -27.742  1.00  0.00              
ATOM     13  N   GLU     4       2.356 -27.963 -27.671  1.00  0.00              
ATOM     14  CA  GLU     4       2.109 -28.305 -29.066  1.00  0.00              
ATOM     15  C   GLU     4       3.058 -27.638 -30.044  1.00  0.00              
ATOM     16  O   GLU     4       3.354 -26.447 -29.921  1.00  0.00              
ATOM     17  N   LEU     5       3.497 -28.413 -31.040  1.00  0.00              
ATOM     18  CA  LEU     5       4.488 -27.958 -32.017  1.00  0.00              
ATOM     19  C   LEU     5       4.078 -26.713 -32.779  1.00  0.00              
ATOM     20  O   LEU     5       4.859 -25.777 -32.884  1.00  0.00              
ATOM     21  N   THR     6       2.873 -26.692 -33.316  1.00  0.00              
ATOM     22  CA  THR     6       2.447 -25.538 -34.089  1.00  0.00              
ATOM     23  C   THR     6       2.382 -24.280 -33.221  1.00  0.00              
ATOM     24  O   THR     6       2.669 -23.169 -33.683  1.00  0.00              
ATOM     25  N   TRP     7       2.020 -24.447 -31.958  1.00  0.00              
ATOM     26  CA  TRP     7       1.959 -23.306 -31.061  1.00  0.00              
ATOM     27  C   TRP     7       3.361 -22.843 -30.704  1.00  0.00              
ATOM     28  O   TRP     7       3.628 -21.640 -30.652  1.00  0.00              
ATOM     29  N   HIS     8       4.256 -23.813 -30.487  1.00  0.00              
ATOM     30  CA  HIS     8       5.640 -23.527 -30.110  1.00  0.00              
ATOM     31  C   HIS     8       6.346 -22.704 -31.181  1.00  0.00              
ATOM     32  O   HIS     8       7.116 -21.785 -30.872  1.00  0.00              
ATOM     33  N   ASP     9       6.042 -23.021 -32.441  1.00  0.00              
ATOM     34  CA  ASP     9       6.662 -22.350 -33.560  1.00  0.00              
ATOM     35  C   ASP     9       6.322 -20.873 -33.590  1.00  0.00              
ATOM     36  O   ASP     9       7.174 -20.050 -33.905  1.00  0.00              
ATOM     37  N   VAL    10       5.098 -20.524 -33.231  1.00  0.00              
ATOM     38  CA  VAL    10       4.676 -19.129 -33.306  1.00  0.00              
ATOM     39  C   VAL    10       4.850 -18.339 -32.003  1.00  0.00              
ATOM     40  O   VAL    10       4.991 -17.122 -32.037  1.00  0.00              
ATOM     41  N   LEU    11       4.863 -19.014 -30.864  1.00  0.00              
ATOM     42  CA  LEU    11       4.947 -18.312 -29.578  1.00  0.00              
ATOM     43  C   LEU    11       6.292 -18.516 -28.882  1.00  0.00              
ATOM     44  O   LEU    11       6.478 -18.067 -27.744  1.00  0.00              
ATOM     45  N   ALA    12       7.233 -19.178 -29.565  1.00  0.00              
ATOM     46  CA  ALA    12       8.543 -19.464 -28.964  1.00  0.00              
ATOM     47  C   ALA    12       9.242 -18.189 -28.472  1.00  0.00              
ATOM     48  O   ALA    12       9.961 -18.225 -27.464  1.00  0.00              
ATOM     49  N   GLU    13       8.997 -17.073 -29.166  1.00  0.00              
ATOM     50  CA  GLU    13       9.600 -15.801 -28.789  1.00  0.00              
ATOM     51  C   GLU    13       9.273 -15.377 -27.362  1.00  0.00              
ATOM     52  O   GLU    13      10.068 -14.698 -26.702  1.00  0.00              
ATOM     53  N   GLU    14       8.111 -15.786 -26.870  1.00  0.00              
ATOM     54  CA  GLU    14       7.723 -15.447 -25.512  1.00  0.00              
ATOM     55  C   GLU    14       8.596 -16.164 -24.485  1.00  0.00              
ATOM     56  O   GLU    14       8.838 -15.642 -23.387  1.00  0.00              
ATOM     57  N   LYS    15       9.101 -17.347 -24.862  1.00  0.00              
ATOM     58  CA  LYS    15       9.850 -18.187 -23.931  1.00  0.00              
ATOM     59  C   LYS    15      11.154 -17.545 -23.434  1.00  0.00              
ATOM     60  O   LYS    15      11.584 -17.806 -22.305  1.00  0.00              
ATOM     61  N   GLN    16      11.755 -16.683 -24.255  1.00  0.00              
ATOM     62  CA  GLN    16      13.020 -16.057 -23.877  1.00  0.00              
ATOM     63  C   GLN    16      12.879 -14.701 -23.204  1.00  0.00              
ATOM     64  O   GLN    16      13.881 -14.111 -22.784  1.00  0.00              
ATOM     65  N   GLN    17      11.653 -14.188 -23.083  1.00  0.00              
ATOM     66  CA  GLN    17      11.465 -12.887 -22.461  1.00  0.00              
ATOM     67  C   GLN    17      11.610 -12.956 -20.943  1.00  0.00              
ATOM     68  O   GLN    17      11.231 -13.941 -20.308  1.00  0.00              
ATOM     69  N   PRO    18      12.178 -11.907 -20.329  1.00  0.00              
ATOM     70  CA  PRO    18      12.381 -11.849 -18.884  1.00  0.00              
ATOM     71  C   PRO    18      11.162 -12.284 -18.057  1.00  0.00              
ATOM     72  O   PRO    18      11.285 -13.150 -17.194  1.00  0.00              
ATOM     73  N   TYR    19       9.985 -11.714 -18.326  1.00  0.00              
ATOM     74  CA  TYR    19       8.788 -12.045 -17.539  1.00  0.00              
ATOM     75  C   TYR    19       8.484 -13.553 -17.542  1.00  0.00              
ATOM     76  O   TYR    19       8.093 -14.102 -16.508  1.00  0.00              
ATOM     77  N   PHE    20       8.678 -14.213 -18.701  1.00  0.00              
ATOM     78  CA  PHE    20       8.356 -15.629 -18.829  1.00  0.00              
ATOM     79  C   PHE    20       9.380 -16.509 -18.121  1.00  0.00              
ATOM     80  O   PHE    20       9.017 -17.467 -17.433  1.00  0.00              
ATOM     81  N   LEU    21      10.655 -16.178 -18.284  1.00  0.00              
ATOM     82  CA  LEU    21      11.714 -16.903 -17.601  1.00  0.00              
ATOM     83  C   LEU    21      11.534 -16.770 -16.077  1.00  0.00              
ATOM     84  O   LEU    21      11.674 -17.751 -15.331  1.00  0.00              
ATOM     85  N   ASN    22      11.171 -15.572 -15.614  1.00  0.00              
ATOM     86  CA  ASN    22      10.897 -15.362 -14.192  1.00  0.00              
ATOM     87  C   ASN    22       9.696 -16.203 -13.750  1.00  0.00              
ATOM     88  O   ASN    22       9.718 -16.851 -12.705  1.00  0.00              
ATOM     89  N   THR    23       8.648 -16.175 -14.562  1.00  0.00              
ATOM     90  CA  THR    23       7.441 -16.935 -14.292  1.00  0.00              
ATOM     91  C   THR    23       7.730 -18.432 -14.135  1.00  0.00              
ATOM     92  O   THR    23       7.274 -19.056 -13.166  1.00  0.00              
ATOM     93  N   LEU    24       8.465 -19.015 -15.095  1.00  0.00              
ATOM     94  CA  LEU    24       8.811 -20.439 -15.011  1.00  0.00              
ATOM     95  C   LEU    24       9.596 -20.726 -13.737  1.00  0.00              
ATOM     96  O   LEU    24       9.382 -21.751 -13.087  1.00  0.00              
ATOM     97  N   GLN    25      10.483 -19.803 -13.364  1.00  0.00              
ATOM     98  CA  GLN    25      11.230 -19.958 -12.130  1.00  0.00              
ATOM     99  C   GLN    25      10.312 -19.946 -10.917  1.00  0.00              
ATOM    100  O   GLN    25      10.440 -20.788 -10.028  1.00  0.00              
ATOM    101  N   THR    26       9.375 -18.993 -10.894  1.00  0.00              
ATOM    102  CA  THR    26       8.402 -18.881  -9.808  1.00  0.00              
ATOM    103  C   THR    26       7.568 -20.175  -9.653  1.00  0.00              
ATOM    104  O   THR    26       7.380 -20.687  -8.537  1.00  0.00              
ATOM    105  N   VAL    27       7.049 -20.686 -10.777  1.00  0.00              
ATOM    106  CA  VAL    27       6.249 -21.901 -10.752  1.00  0.00              
ATOM    107  C   VAL    27       7.090 -23.097 -10.276  1.00  0.00              
ATOM    108  O   VAL    27       6.612 -23.925  -9.491  1.00  0.00              
END
